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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 434 61.15 0 456915..457784 + 289 121603353 - Pnap_0439 - CBS domain-containing protein 435 66.41 0 457921..459471 + 516 121603354 - Pnap_0440 - apolipoprotein N-acyltransferase 436 65.91 0 459474..460394 - 306 121603355 - Pnap_0441 - LysR family transcriptional regulator 437 63.95 0 460542..461681 + 379 121603356 - Pnap_0442 - L-asparaginases, type II 438 60.95 0 461823..462749 + 308 121603357 glyQ Pnap_0443 - glycyl-tRNA synthetase subunit alpha 439 64.14 0 462753..464888 + 711 121603358 - Pnap_0444 - glycine--tRNA ligase 440 70.81 +1 464914..465564 + 216 121603359 - Pnap_0445 - hypothetical protein 441 65.81 0 465564..466148 + 194 121603360 - Pnap_0446 - histidinol-phosphate phosphatase family protein 442 63.02 0 466315..467082 + 255 121603361 - Pnap_0447 - phospholipid/glycerol acyltransferase 443 65.00 0 467090..468049 + 319 121603362 - Pnap_0448 - hypothetical protein 444 58.50 0 468166..468606 + 146 121603363 - Pnap_0449 - response regulator receiver protein 445 61.60 0 468674..472207 + 1177 121603364 - Pnap_0450 - multi-sensor signal transduction histidine kinase 446 59.35 0 472320..472961 + 213 121603365 - Pnap_0451 - response regulator receiver protein 447 58.85 0 472986..474545 + 519 121603366 - Pnap_0452 - PAS/PAC sensor signal transduction histidine kinase 448 60.35 0 474767..475162 + 131 121603367 - Pnap_0453 - MerR family transcriptional regulator 449 66.22 0 475243..475686 + 147 121603368 - Pnap_0454 - hypothetical protein 450 63.62 0 475729..476910 + 393 121603369 - Pnap_0455 - acyl-CoA dehydrogenase domain-containing protein 451 59.55 0 476964..477623 + 219 121603370 - Pnap_0456 - carbonate dehydratase 452 62.45 0 477701..479572 + 623 121603371 aceK Pnap_0457 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 453 68.02 0 479647..480828 + 393 121603372 - Pnap_0458 - acetyl-CoA acetyltransferases 454 65.16 0 480874..482004 + 376 121603373 - Pnap_0459 - acyl-CoA dehydrogenase domain-containing protein 455 64.27 0 482039..482455 + 138 121603374 - Pnap_0460 - rhodanese domain-containing protein 456 66.75 0 482671..483831 + 386 121603375 - Pnap_0461 - aminotransferase, class V 457 58.13 0 483853..484824 - 323 121603376 - Pnap_0462 - hypothetical protein 458 68.54 +1 485047..485313 + 88 121603377 - Pnap_0463 - aminotransferase, class V 459 62.11 0 485332..485946 - 204 121603378 - Pnap_0464 - hypothetical protein 460 61.01 0 486200..486994 + 264 121603379 - Pnap_0465 - hypothetical protein 461 67.64 0 487094..487504 + 136 121603380 - Pnap_0466 - hypothetical protein 462 68.79 +1 487567..488226 + 219 121603381 - Pnap_0467 - HAD family hydrolase 463 63.31 0 488415..488861 - 148 121603382 - Pnap_0468 - Ion transport 2 domain-containing protein 464 70.53 +1 488880..489941 - 353 121603383 - Pnap_0469 - helix-turn-helix domain-containing protein 465 64.31 0 490052..491791 + 579 121603384 - Pnap_0470 - acyl-CoA synthetase 466 65.36 0 491808..493415 + 535 121603385 - Pnap_0471 - propionyl-CoA carboxylase 467 67.82 0 493424..493945 + 173 121603386 - Pnap_0472 - DinB family protein 468 65.64 0 493942..494724 + 260 121603387 - Pnap_0473 - enoyl-CoA hydratase 469 65.62 0 494747..495418 + 223 121603388 - Pnap_0474 - putative transmembrane protein 470 64.98 0 495411..497423 + 670 121603389 - Pnap_0475 - carbamoyl-phosphate synthase L chain, ATP-binding 471 66.24 0 497441..498370 + 309 121603390 - Pnap_0476 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 472 63.54 0 498375..499301 + 308 121603391 - Pnap_0477 - pyruvate carboxyltransferase 473 65.47 0 499301..500053 + 250 121603392 - Pnap_0478 - YbaK/prolyl-tRNA synthetase associated region 474 64.35 0 500050..500739 + 229 121603393 - Pnap_0479 - DSBA oxidoreductase 475 63.82 0 500800..502626 + 608 121603394 - Pnap_0480 - cyclic nucleotide-binding protein 476 64.40 0 502623..503285 + 220 121603395 - Pnap_0481 - DNA polymerase III subunit epsilon 477 62.15 0 503441..503794 + 117 121603396 - Pnap_0482 - transport-associated 478 55.08 -1 505881..506234 - 117 121603397 - Pnap_0484 - hypothetical protein 479 60.82 0 506556..508214 + 552 121603398 - Pnap_0485 - major facilitator superfamily transporter 480 61.90 0 508230..508733 + 167 121603399 - Pnap_0486 - hypothetical protein 481 58.51 0 508744..509847 - 367 121603400 - Pnap_0487 - extracellular ligand-binding receptor 482 67.07 0 510042..515939 + 1965 121603401 - Pnap_0488 - excinuclease ABC, A subunit 483 62.28 0 516348..517784 + 478 121603402 - Pnap_0489 - S-adenosyl-L-homocysteine hydrolase 484 65.00 0 517927..519003 + 358 121603403 - Pnap_0490 - ribosomal RNA methyltransferase RrmJ/FtsJ 485 63.78 0 519013..519843 + 276 121603404 - Pnap_0491 - 5,10-methylenetetrahydrofolate reductase 486 70.01 +1 519843..520559 + 238 121603405 - Pnap_0492 - rare lipoprotein A 487 62.82 0 520730..521353 + 207 121603406 - Pnap_0493 - hypothetical protein 488 62.99 0 521356..522768 + 470 121603407 - Pnap_0494 - cytochrome bd ubiquinol oxidase, subunit I 489 64.63 0 522761..523792 + 343 121603408 - Pnap_0495 - cytochrome bd ubiquinol oxidase, subunit II 490 63.64 0 523803..524825 - 340 121603409 - Pnap_0496 - hypothetical protein 491 65.60 0 524874..526469 - 531 121603410 - Pnap_0497 - regulator of RNA terminal phosphate cyclase 492 62.80 0 526614..527906 + 430 121603411 - Pnap_0498 - hypothetical protein 493 64.57 0 527926..529023 + 365 121603412 - Pnap_0499 - RNA-3'-phosphate cyclase 494 56.08 -1 529265..529708 + 147 121603413 rplM Pnap_0500 - 50S ribosomal protein L13 495 60.81 0 529705..530097 + 130 121603414 - Pnap_0501 - ribosomal protein S9 496 57.38 -1 530261..530626 + 121 121603415 - Pnap_0502 - iron-sulfur cluster insertion protein ErpA 497 67.38 0 530809..533061 + 750 121603416 - Pnap_0503 - helicase c2 498 66.40 0 533105..534244 - 379 121603417 anmK Pnap_0504 - anhydro-N-acetylmuramic acid kinase 499 65.59 0 534281..535678 - 465 121603418 - Pnap_0505 - peptidase M23B 500 63.58 0 535905..537137 + 410 121603419 - Pnap_0506 - tyrosyl-tRNA synthetase 501 68.39 +1 537151..537615 + 154 121603420 - Pnap_0507 - D-tyrosyl-tRNA deacylase 502 62.72 0 537696..538151 - 151 121603421 - Pnap_0508 - hypothetical protein 503 65.51 0 538141..539178 - 345 121603422 - Pnap_0509 - PhoH family protein 504 64.94 0 539239..539817 + 192 121603423 ruvA Pnap_0510 - Holliday junction DNA helicase motor protein 505 46.17 -2 539830..540756 + 308 121603424 - Pnap_0511 - hypothetical protein 506 65.36 0 540753..541823 + 356 121603425 ruvB Pnap_0512 - Holliday junction DNA helicase B 507 67.34 0 542006..543196 - 396 121603426 - Pnap_0513 - putative threonine aldolase 508 69.04 +1 543224..543898 - 224 121603427 - Pnap_0514 - phosphoglycerate mutase 509 66.19 0 543948..544574 - 208 121603428 - Pnap_0515 - hypothetical protein 510 60.74 0 544596..545540 - 314 121603429 - Pnap_0516 - PP-loop domain-containing protein 511 59.60 0 545546..545998 - 150 121603430 - Pnap_0517 - dihydroneopterin aldolase 512 68.10 0 545995..546762 - 255 121603431 - Pnap_0518 - short-chain dehydrogenase/reductase SDR 513 65.85 0 546835..547941 + 368 121603432 - Pnap_0519 - hypothetical protein 514 59.50 0 548057..548335 + 92 121603433 - Pnap_0520 - hypothetical protein 515 64.93 0 548332..549600 + 422 121603434 - Pnap_0521 - HipA domain-containing protein 516 56.41 -1 549611..549805 + 64 121603435 - Pnap_0522 - hypothetical protein 517 60.46 0 549995..551251 + 418 121603436 - Pnap_0523 - extracellular solute-binding protein 518 65.44 0 551295..552680 - 461 121603437 - Pnap_0524 - alpha,alpha-trehalose-phosphate synthase (UDP-forming) 519 65.51 0 552677..554497 - 606 121603438 - Pnap_0525 - glycoside hydrolase 15-related 520 69.10 +1 554494..555273 - 259 121603439 - Pnap_0526 - HAD family hydrolase 521 67.92 0 555398..557479 - 693 121603440 - Pnap_0527 - lytic transglycosylase, catalytic 522 64.32 0 557489..558127 + 212 121603441 - Pnap_0528 - 5-formyltetrahydrofolate cyclo-ligase 523 66.67 0 558214..559257 - 347 121603442 - Pnap_0529 - LysR family transcriptional regulator 524 71.43 +1 559331..559792 + 153 121603443 - Pnap_0530 - hypothetical protein 525 64.44 0 559817..560221 - 134 121603444 - Pnap_0531 - BLUF domain-containing protein 526 64.26 0 560234..561064 + 276 121603445 - Pnap_0532 - cyclic nucleotide-binding protein 527 68.64 +1 561187..562608 + 473 121603446 - Pnap_0533 - UDP-N-acetylglucosamine pyrophosphorylase 528 61.90 0 563289..563771 - 160 121603447 - Pnap_0535 - AsnC family transcriptional regulator 529 66.72 0 563910..565766 + 618 121603448 - Pnap_0536 - D-fructose-6-phosphate amidotransferase 530 61.17 0 565874..566455 - 193 121603449 - Pnap_0537 - transposase, IS4 family protein 531 61.84 0 566895..567371 + 158 121603450 - Pnap_0538 - rhodanese domain-containing protein 532 65.91 0 567423..568349 + 308 121603451 - Pnap_0539 - Serine O-acetyltransferase 533 61.17 0 568346..568618 + 90 121603452 - Pnap_0540 - helix-turn-helix domain-containing protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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