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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3985 66.21 0 4285556..4286863 + 435 121606904 - Pnap_4020 - dihydropyrimidine dehydrogenase 3986 66.32 0 4286928..4288373 + 481 121606905 - Pnap_4021 - dihydropyrimidinase 3987 67.54 0 4288398..4289654 + 418 121606906 - Pnap_4022 - amidase 3988 51.91 -2 4289768..4291231 + 487 121606907 - Pnap_4023 - hypothetical protein 3989 52.54 -1 4291549..4291725 + 58 121606908 - Pnap_4024 - hypothetical protein 3990 68.48 +1 4292306..4292692 + 128 121606909 - Pnap_4025 - globin family protein 3991 66.93 0 4292732..4293106 - 124 121606910 - Pnap_4026 - hypothetical protein 3992 57.20 -1 4293501..4293986 - 161 121606911 - Pnap_4027 - calcium/calmodulin dependent protein kinase II association-domain-containing protein 3993 64.03 0 4294144..4294674 - 176 121606912 - Pnap_4028 - 3-demethylubiquinone-9 3-methyltransferase 3994 71.79 +1 4294900..4296168 - 422 121606913 - Pnap_4029 - cytochrome P450 3995 68.69 +1 4296168..4297205 - 345 121606914 - Pnap_4030 - biotin synthase 3996 70.40 +1 4297239..4297961 - 240 121606915 - Pnap_4031 - dethiobiotin synthase 3997 70.56 +1 4297958..4299190 - 410 121606916 - Pnap_4032 - 8-amino-7-oxononanoate synthase 3998 67.51 0 4300919..4301395 - 158 121606917 - Pnap_4034 - putative transposase of insertion sequence ISRm10-1 3999 69.93 +1 4301415..4301873 - 152 121606918 - Pnap_4035 - hypothetical protein 4000 57.61 0 4301949..4302224 - 91 121606919 - Pnap_4036 - hypothetical protein 4001 69.24 +1 4302526..4303185 - 219 121606920 - Pnap_4037 - TetR family transcriptional regulator 4002 67.67 0 4303280..4304275 - 331 121606921 - Pnap_4038 - LysR family transcriptional regulator 4003 65.78 0 4304383..4305732 + 449 121606922 - Pnap_4039 - beta alanine--pyruvate transaminase 4004 65.63 0 4306250..4307410 + 386 121606923 - Pnap_4040 - ABC-type sugar transport system periplasmic component-like protein 4005 62.35 0 4307485..4308480 + 331 121606924 - Pnap_4041 - TRAP dicarboxylate transporter, DctP subunit 4006 60.22 0 4308570..4309562 + 330 121606925 - Pnap_4042 - TRAP dicarboxylate transporter, DctP subunit 4007 59.45 0 4309559..4310542 + 327 121606926 - Pnap_4043 - TRAP dicarboxylate transporter, DctP subunit 4008 63.81 0 4310629..4312587 + 652 121606927 - Pnap_4044 - integral membrane sensor signal transduction histidine kinase 4009 61.65 0 4312584..4313720 + 378 121606928 - Pnap_4045 - hypothetical protein 4010 64.75 0 4313707..4315218 + 503 121606929 - Pnap_4046 - PAS/PAC sensor signal transduction histidine kinase 4011 65.05 0 4315215..4316510 + 431 121606930 - Pnap_4047 - response regulator receiver sensor signal transduction histidine kinase 4012 64.35 0 4316507..4317802 + 431 121606931 - Pnap_4048 - response regulator receiver sensor signal transduction histidine kinase 4013 63.12 0 4317799..4319460 + 553 121606932 - Pnap_4049 - multi-sensor signal transduction histidine kinase 4014 63.97 0 4319520..4320632 + 370 121606933 - Pnap_4050 - putative ABC transporter 4015 68.01 0 4320629..4322116 + 495 121606934 - Pnap_4051 - ABC transporter related 4016 68.12 0 4322109..4323068 + 319 121606935 - Pnap_4052 - inner-membrane translocator 4017 67.66 0 4323104..4324009 + 301 121606936 - Pnap_4053 - inner-membrane translocator 4018 69.06 +1 4324044..4329314 + 1756 121606937 - Pnap_4054 - ATPase domain-containing protein 4019 62.26 0 4329582..4330580 - 332 121606938 - Pnap_4055 - glyceraldehyde-3-phosphate dehydrogenase, type I 4020 65.79 0 4330644..4332689 - 681 121606939 - Pnap_4056 - transketolase 4021 67.34 0 4332893..4333630 + 245 121606940 - Pnap_4057 - nucleotidyl transferase 4022 66.67 0 4333645..4335066 + 473 121606941 - Pnap_4058 - peptidase M24 4023 56.74 -1 4335118..4335510 + 130 121606942 - Pnap_4059 - glutaredoxin 4024 60.68 0 4335553..4335936 - 127 121606943 - Pnap_4060 - glutaredoxin 4025 63.01 0 4336221..4336658 + 145 121606944 - Pnap_4061 - signal-transduction protein 4026 63.50 0 4336695..4337453 - 252 121606945 - Pnap_4062 - ABC transporter related 4027 63.13 0 4337466..4338116 - 216 121606946 - Pnap_4063 - polar amino acid ABC transporter, inner membrane subunit 4028 65.60 0 4338133..4338789 - 218 121606947 - Pnap_4064 - polar amino acid ABC transporter, inner membrane subunit 4029 62.89 0 4338898..4339692 - 264 121606948 - Pnap_4065 - extracellular solute-binding protein 4030 66.56 0 4339915..4340826 + 303 121606949 - Pnap_4066 - RpiR family transcriptional regulator 4031 69.36 +1 4340848..4342071 + 407 121606950 - Pnap_4067 - diaminopropionate ammonia-lyase 4032 69.08 +1 4342068..4343312 + 414 121606951 - Pnap_4068 - allantoate amidohydrolase 4033 63.56 0 4343352..4344317 + 321 121606952 - Pnap_4069 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4034 69.36 +1 4344490..4348458 - 1322 121606953 putA Pnap_4070 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4035 63.96 0 4348842..4351172 + 776 121606954 - Pnap_4071 - malic enzyme 4036 55.16 -1 4351669..4352094 + 141 121606955 - Pnap_4072 - hypothetical protein 4037 57.50 0 4352079..4352318 - 79 121606956 - Pnap_4073 - hypothetical protein 4038 63.69 0 4352364..4353203 - 279 121606957 - Pnap_4074 - dimethyladenosine transferase 4039 68.30 +1 4353200..4354609 - 469 121606958 - Pnap_4075 - PpiC-type peptidyl-prolyl cis-trans isomerase 4040 65.44 0 4354602..4357046 - 814 121606959 - Pnap_4076 - organic solvent tolerance protein 4041 67.41 0 4357149..4358231 + 360 121606960 - Pnap_4077 - aminoglycoside phosphotransferase 4042 70.25 +1 4358323..4359075 + 250 121606961 - Pnap_4078 - hypothetical protein 4043 66.04 0 4359135..4359935 - 266 121606962 - Pnap_4079 - amidohydrolase 2 4044 67.45 0 4359966..4360733 + 255 121606963 - Pnap_4080 - UbiC transcription regulator-associated domain-containing protein 4045 68.35 +1 4360780..4361787 + 335 121606964 - Pnap_4081 - hypothetical protein 4046 65.96 0 4361859..4362854 + 331 121606965 - Pnap_4082 - hypothetical protein 4047 67.28 0 4362976..4364451 - 491 121606966 - Pnap_4083 - peptidase M20 4048 66.80 0 4364542..4365282 - 246 121606967 - Pnap_4084 - two component LuxR family transcriptional regulator 4049 66.11 0 4365539..4367497 - 652 121606968 - Pnap_4085 - integral membrane sensor signal transduction histidine kinase 4050 63.21 0 4367746..4370757 + 1003 121606969 - Pnap_4086 - pentapeptide repeat-containing protein 4051 64.84 0 4370812..4374099 + 1095 121606970 - Pnap_4087 - hypothetical protein 4052 66.78 0 4374139..4375008 - 289 121606971 - Pnap_4088 - phosphatidylserine decarboxylase 4053 58.73 0 4375075..4375263 - 62 121606972 - Pnap_4089 - heavy metal transport/detoxification protein 4054 68.06 0 4375468..4377909 + 813 121606973 - Pnap_4090 - heavy metal translocating P-type ATPase 4055 69.54 +1 4377906..4378322 + 138 121606974 - Pnap_4091 - MerR family transcriptional regulator 4056 69.48 +1 4378552..4378800 - 82 121606975 - Pnap_4092 - hypothetical protein 4057 60.48 0 4379141..4379512 - 123 121606976 - Pnap_4093 - hypothetical protein 4058 57.43 0 4379823..4380980 - 385 121606977 - Pnap_4095 - IS605 family transposase OrfB 4059 58.19 0 4381236..4382120 - 294 121606978 - Pnap_4096 - transposase, IS4 family protein 4060 71.71 +1 4382303..4382956 + 217 121606979 - Pnap_4097 - 2OG-Fe(II) oxygenase 4061 67.49 0 4382968..4383822 - 284 121606980 - Pnap_4098 - hydroxypyruvate isomerase 4062 68.55 +1 4383829..4385691 - 620 121606981 - Pnap_4099 - sulphate transporter 4063 67.03 0 4385742..4387106 - 454 121606982 - Pnap_4100 - chromate transporter 4064 66.50 0 4387108..4387716 - 202 121606983 - Pnap_4101 - methionine biosynthesis protein MetW 4065 62.34 0 4387713..4388822 - 369 121606984 metX Pnap_4102 - homoserine O-acetyltransferase 4066 62.79 0 4389011..4389577 - 188 121606985 - Pnap_4103 - hypothetical protein 4067 59.68 0 4389963..4391165 + 400 121606986 - Pnap_4104 - Rh family protein/ammonium transporter 4068 65.14 0 4391376..4391834 + 152 121606987 - Pnap_4105 - RNP-1 like RNA-binding protein 4069 53.36 -1 4391993..4392706 - 237 121606988 - Pnap_4106 - hypothetical protein 4070 56.96 -1 4392703..4393320 - 205 121606989 - Pnap_4107 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4071 59.92 0 4393322..4394314 - 330 121606990 - Pnap_4108 - KpsF/GutQ family protein 4072 60.73 0 4394405..4396390 + 661 121606991 - Pnap_4109 - sodium/hydrogen exchanger 4073 52.28 -1 4396457..4397137 - 226 121606992 - Pnap_4110 - hypothetical protein 4074 54.07 -1 4397306..4397797 - 163 121606993 - Pnap_4111 - cyclic nucleotide-binding protein 4075 59.29 0 4397951..4399387 - 478 121606994 - Pnap_4112 - tRNA modification GTPase TrmE 4076 55.61 -1 4399442..4401151 - 569 121606995 - Pnap_4113 - 60 kDa inner membrane insertion protein 4077 57.86 0 4401148..4401465 - 105 121606996 - Pnap_4114 - hypothetical protein 4078 55.86 -1 4401462..4401794 - 110 121606997 - Pnap_4115 - hypothetical protein 4079 59.26 0 4401930..4402064 - 44 121606998 - Pnap_4116 - ribosomal protein L34 4080 55.29 -1 4402850..4404247 + 465 121606999 - Pnap_4117 - chromosomal replication initiator protein DnaA 4081 58.18 0 4404522..4405628 + 368 121607000 - Pnap_4118 - DNA polymerase III, beta subunit 4082 62.82 0 4405728..4408352 + 874 121607001 - Pnap_4119 - DNA gyrase, B subunit 4083 68.95 +1 4408360..4408971 + 203 121607002 - Pnap_4120 - DNA-directed DNA polymerase 4084 67.12 0 4409056..4410153 + 365 121607003 - Pnap_4121 - phospho-2-dehydro-3-deoxyheptonate aldolase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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