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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3931 64.92 0 4229131..4232103 - 990 121606850 - Pnap_3963 - DNA topoisomerase III 3932 63.86 0 4232301..4232834 + 177 121606851 - Pnap_3964 - nuclear protein SET 3933 71.31 +1 4232842..4233768 + 308 121606852 - Pnap_3965 - biotin--acetyl-CoA-carboxylase ligase 3934 69.86 +1 4233762..4234451 + 229 121606853 - Pnap_3966 - putative signal peptide protein 3935 69.80 +1 4234547..4235185 - 212 121606854 - Pnap_3967 - esterase YpfH 3936 62.68 0 4235411..4235887 + 158 121606855 - Pnap_3968 - peptidylprolyl isomerase, FKBP-type 3937 63.92 0 4236077..4236367 + 96 121606856 - Pnap_3969 - hypothetical protein 3938 69.59 +1 4236402..4237598 + 398 121606857 - Pnap_3970 - NnrS family protein 3939 54.83 -1 4237858..4238178 + 106 121606858 - Pnap_3971 - hypothetical protein 3940 68.60 +1 4238250..4238714 - 154 121606859 - Pnap_3972 - hypothetical protein 3941 64.17 0 4238977..4239858 + 293 121606860 - Pnap_3973 - tolA protein 3942 64.58 0 4240020..4241843 + 607 121606861 - Pnap_3974 - hypothetical protein 3943 39.35 -2 4241850..4242779 + 309 121606862 - Pnap_3975 - hypothetical protein 3944 41.32 -2 4242776..4244515 + 579 121606863 - Pnap_3976 - hypothetical protein 3945 58.33 0 4244727..4245302 - 191 121606864 - Pnap_3977 - hypothetical protein 3946 59.75 0 4245303..4245779 - 158 121606865 - Pnap_3978 - DNA binding domain-containing protein 3947 55.43 -1 4246000..4246275 + 91 121606866 - Pnap_3979 - hypothetical protein 3948 67.64 0 4246576..4247802 + 408 121606867 - Pnap_3980 - filamentation induced by cAMP protein Fic 3949 64.17 0 4248627..4248947 + 106 121606868 - Pnap_3982 - hypothetical protein 3950 60.24 0 4249222..4249641 + 139 121606869 - Pnap_3983 - hypothetical protein 3951 65.36 0 4249744..4250511 + 255 121606870 - Pnap_3984 - glutathione S-transferase domain-containing protein 3952 66.35 0 4250533..4251171 - 212 121606871 - Pnap_3985 - methyltransferase type 11 3953 64.98 0 4251561..4252391 + 276 121606872 - Pnap_3986 - transglutaminase domain-containing protein 3954 66.76 0 4252471..4254627 - 718 121606873 - Pnap_3987 - putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 3955 71.36 +1 4254750..4255964 + 404 121606874 - Pnap_3988 - short-chain dehydrogenase/reductase SDR 3956 69.86 +1 4256132..4256914 - 260 121606875 - Pnap_3989 - short-chain dehydrogenase/reductase SDR 3957 67.45 0 4257077..4257973 + 298 121606876 - Pnap_3990 - LysR family transcriptional regulator 3958 63.46 0 4258147..4258614 + 155 121606877 - Pnap_3991 - 3-demethylubiquinone-9 3-methyltransferase 3959 68.28 +1 4258697..4259068 - 123 121606878 - Pnap_3992 - triple helix repeat-containing collagen 3960 69.39 +1 4259358..4260458 + 366 121606879 - Pnap_3993 - pirin domain-containing protein 3961 59.18 0 4260639..4261079 + 146 121606880 - Pnap_3994 - response regulator receiver protein 3962 65.57 0 4261305..4262036 + 243 121606881 - Pnap_3995 - TetR family transcriptional regulator 3963 64.88 0 4262110..4262556 + 148 121606882 - Pnap_3996 - 3-dehydroquinate dehydratase 3964 66.14 0 4262581..4263339 - 252 121606883 - Pnap_3997 - hypothetical protein 3965 60.49 0 4263776..4264228 + 150 121606884 - Pnap_4000 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3966 71.22 +1 4264289..4266526 - 745 121606885 - Pnap_4001 - heavy metal translocating P-type ATPase 3967 69.72 +1 4266583..4267041 + 152 121606886 - Pnap_4002 - MerR family transcriptional regulator 3968 69.16 +1 4267070..4268272 - 400 121606887 - Pnap_4003 - major facilitator superfamily transporter 3969 70.27 +1 4268421..4269308 + 295 121606888 - Pnap_4004 - LysR family transcriptional regulator 3970 69.54 +1 4269356..4270468 + 370 121606889 - Pnap_4005 - hypothetical protein 3971 64.14 0 4270757..4270993 - 78 121606890 - Pnap_4006 - hypothetical protein 3972 65.96 0 4271140..4272414 + 424 121606891 - Pnap_4007 - cytosine deaminase 3973 63.35 0 4272489..4273151 - 220 121606892 - Pnap_4008 - transposase 3974 59.70 0 4273148..4273621 - 157 121606893 - Pnap_4009 - transposase 3975 52.15 -1 4273692..4274552 + 286 121606894 - Pnap_4010 - hypothetical protein 3976 71.62 +1 4274678..4276150 + 490 121606895 - Pnap_4011 - exoribonuclease II 3977 69.20 +1 4276274..4276549 + 91 121606896 - Pnap_4012 - hypothetical protein 3978 67.35 0 4276806..4278422 + 538 121606897 - Pnap_4013 - polypeptide-transport-associated domain-containing protein 3979 68.20 +1 4278440..4281310 + 956 121606898 - Pnap_4014 - filamentous haemagglutinin outer membrane protein 3980 65.61 0 4281323..4282174 + 283 121606899 - Pnap_4015 - hypothetical protein 3981 70.96 +1 4282221..4283174 - 317 121606900 - Pnap_4016 - 2-dehydropantoate 2-reductase 3982 59.05 0 4283305..4283619 + 104 121606901 - Pnap_4017 - hypothetical protein 3983 64.80 0 4283623..4283943 + 106 121606902 - Pnap_4018 - putative transcriptional regulator 3984 70.53 +1 4284159..4285505 + 448 121606903 - Pnap_4019 - putative oxidoreductase 3985 66.21 0 4285556..4286863 + 435 121606904 - Pnap_4020 - dihydropyrimidine dehydrogenase 3986 66.32 0 4286928..4288373 + 481 121606905 - Pnap_4021 - dihydropyrimidinase 3987 67.54 0 4288398..4289654 + 418 121606906 - Pnap_4022 - amidase 3988 51.91 -2 4289768..4291231 + 487 121606907 - Pnap_4023 - hypothetical protein 3989 52.54 -1 4291549..4291725 + 58 121606908 - Pnap_4024 - hypothetical protein 3990 68.48 +1 4292306..4292692 + 128 121606909 - Pnap_4025 - globin family protein 3991 66.93 0 4292732..4293106 - 124 121606910 - Pnap_4026 - hypothetical protein 3992 57.20 -1 4293501..4293986 - 161 121606911 - Pnap_4027 - calcium/calmodulin dependent protein kinase II association-domain-containing protein 3993 64.03 0 4294144..4294674 - 176 121606912 - Pnap_4028 - 3-demethylubiquinone-9 3-methyltransferase 3994 71.79 +1 4294900..4296168 - 422 121606913 - Pnap_4029 - cytochrome P450 3995 68.69 +1 4296168..4297205 - 345 121606914 - Pnap_4030 - biotin synthase 3996 70.40 +1 4297239..4297961 - 240 121606915 - Pnap_4031 - dethiobiotin synthase 3997 70.56 +1 4297958..4299190 - 410 121606916 - Pnap_4032 - 8-amino-7-oxononanoate synthase 3998 67.51 0 4300919..4301395 - 158 121606917 - Pnap_4034 - putative transposase of insertion sequence ISRm10-1 3999 69.93 +1 4301415..4301873 - 152 121606918 - Pnap_4035 - hypothetical protein 4000 57.61 0 4301949..4302224 - 91 121606919 - Pnap_4036 - hypothetical protein 4001 69.24 +1 4302526..4303185 - 219 121606920 - Pnap_4037 - TetR family transcriptional regulator 4002 67.67 0 4303280..4304275 - 331 121606921 - Pnap_4038 - LysR family transcriptional regulator 4003 65.78 0 4304383..4305732 + 449 121606922 - Pnap_4039 - beta alanine--pyruvate transaminase 4004 65.63 0 4306250..4307410 + 386 121606923 - Pnap_4040 - ABC-type sugar transport system periplasmic component-like protein 4005 62.35 0 4307485..4308480 + 331 121606924 - Pnap_4041 - TRAP dicarboxylate transporter, DctP subunit 4006 60.22 0 4308570..4309562 + 330 121606925 - Pnap_4042 - TRAP dicarboxylate transporter, DctP subunit 4007 59.45 0 4309559..4310542 + 327 121606926 - Pnap_4043 - TRAP dicarboxylate transporter, DctP subunit 4008 63.81 0 4310629..4312587 + 652 121606927 - Pnap_4044 - integral membrane sensor signal transduction histidine kinase 4009 61.65 0 4312584..4313720 + 378 121606928 - Pnap_4045 - hypothetical protein 4010 64.75 0 4313707..4315218 + 503 121606929 - Pnap_4046 - PAS/PAC sensor signal transduction histidine kinase 4011 65.05 0 4315215..4316510 + 431 121606930 - Pnap_4047 - response regulator receiver sensor signal transduction histidine kinase 4012 64.35 0 4316507..4317802 + 431 121606931 - Pnap_4048 - response regulator receiver sensor signal transduction histidine kinase 4013 63.12 0 4317799..4319460 + 553 121606932 - Pnap_4049 - multi-sensor signal transduction histidine kinase 4014 63.97 0 4319520..4320632 + 370 121606933 - Pnap_4050 - putative ABC transporter 4015 68.01 0 4320629..4322116 + 495 121606934 - Pnap_4051 - ABC transporter related 4016 68.12 0 4322109..4323068 + 319 121606935 - Pnap_4052 - inner-membrane translocator 4017 67.66 0 4323104..4324009 + 301 121606936 - Pnap_4053 - inner-membrane translocator 4018 69.06 +1 4324044..4329314 + 1756 121606937 - Pnap_4054 - ATPase domain-containing protein 4019 62.26 0 4329582..4330580 - 332 121606938 - Pnap_4055 - glyceraldehyde-3-phosphate dehydrogenase, type I 4020 65.79 0 4330644..4332689 - 681 121606939 - Pnap_4056 - transketolase 4021 67.34 0 4332893..4333630 + 245 121606940 - Pnap_4057 - nucleotidyl transferase 4022 66.67 0 4333645..4335066 + 473 121606941 - Pnap_4058 - peptidase M24 4023 56.74 -1 4335118..4335510 + 130 121606942 - Pnap_4059 - glutaredoxin 4024 60.68 0 4335553..4335936 - 127 121606943 - Pnap_4060 - glutaredoxin 4025 63.01 0 4336221..4336658 + 145 121606944 - Pnap_4061 - signal-transduction protein 4026 63.50 0 4336695..4337453 - 252 121606945 - Pnap_4062 - ABC transporter related 4027 63.13 0 4337466..4338116 - 216 121606946 - Pnap_4063 - polar amino acid ABC transporter, inner membrane subunit 4028 65.60 0 4338133..4338789 - 218 121606947 - Pnap_4064 - polar amino acid ABC transporter, inner membrane subunit 4029 62.89 0 4338898..4339692 - 264 121606948 - Pnap_4065 - extracellular solute-binding protein 4030 66.56 0 4339915..4340826 + 303 121606949 - Pnap_4066 - RpiR family transcriptional regulator 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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