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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3809 68.75 +1 4096811..4097818 + 335 121606728 - Pnap_3840 - peptidase M19, renal dipeptidase 3810 65.56 0 4097851..4098300 + 149 121606729 - Pnap_3841 - thioesterase superfamily protein 3811 65.64 0 4098692..4100641 + 649 121606730 - Pnap_3842 - putative outer membrane protein 3812 68.67 +1 4100700..4101548 - 282 121606731 pyrF Pnap_3843 - orotidine 5'-phosphate decarboxylase 3813 71.54 +1 4101573..4102373 - 266 121606732 - Pnap_3844 - phage SPO1 DNA polymerase-related protein 3814 66.87 0 4102390..4102884 - 164 121606733 - Pnap_3845 - ribosomal-protein-alanine acetyltransferase 3815 70.26 +1 4102891..4103670 - 259 121606734 - Pnap_3846 - peptidase M22, glycoprotease 3816 70.76 +1 4103738..4105324 + 528 121606735 - Pnap_3847 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 3817 65.31 0 4105661..4106545 + 294 121606736 - Pnap_3848 - transglutaminase domain-containing protein 3818 68.62 +1 4106542..4107258 + 238 121606737 - Pnap_3849 - N-formylglutamate amidohydrolase 3819 62.61 0 4107341..4107685 + 114 121606738 - Pnap_3850 - alkylphosphonate utilization operon protein PhnA 3820 62.59 0 4107759..4108028 + 89 121606739 - Pnap_3851 - hypothetical protein 3821 64.94 0 4108048..4109145 - 365 121606740 - Pnap_3852 - alcohol dehydrogenase 3822 58.18 0 4109304..4109633 + 109 121606741 - Pnap_3853 - hypothetical protein 3823 66.67 0 4109660..4110493 + 277 121606742 - Pnap_3854 - iron permease FTR1 3824 65.48 0 4110468..4111223 - 251 121606743 - Pnap_3855 - hypothetical protein 3825 64.35 0 4111357..4112175 + 272 121606744 - Pnap_3856 - Sel1 domain-containing protein 3826 68.84 +1 4112235..4113479 - 414 121606745 - Pnap_3857 - PHB depolymerase family esterase 3827 68.09 0 4113538..4113960 - 140 121606746 - Pnap_3858 - CopG/Arc/MetJ family transcriptional regulator 3828 61.97 0 4114131..4114364 - 77 121606747 - Pnap_3859 - SlyX family protein 3829 63.09 0 4114468..4115613 + 381 121606748 - Pnap_3860 - extracellular ligand-binding receptor 3830 72.26 +1 4115633..4116616 - 327 121606749 - Pnap_3861 - Sua5/YciO/YrdC/YwlC family protein 3831 66.91 0 4116616..4117848 - 410 121606750 - Pnap_3862 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3832 67.45 0 4117845..4118354 - 169 121606751 - Pnap_3863 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 3833 63.96 0 4118559..4119446 + 295 121606752 - Pnap_3864 - thioredoxin domain-containing protein 3834 65.91 0 4119443..4119838 - 131 121606753 - Pnap_3865 - hypothetical protein 3835 64.60 0 4119917..4120498 - 193 121606754 - Pnap_3866 - PfpI family intracellular peptidase 3836 55.27 -1 4120614..4120850 - 78 121606755 - Pnap_3867 - hypothetical protein 3837 66.23 0 4120877..4121794 - 305 121606756 - Pnap_3868 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3838 63.85 0 4121897..4122961 - 354 121606757 - Pnap_3869 - fructose-1,6-bisphosphate aldolase 3839 69.29 +1 4123071..4124480 - 469 121606758 - Pnap_3870 - histidine kinase 3840 68.25 +1 4124477..4125169 - 230 121606759 - Pnap_3871 - two component transcriptional regulator 3841 66.17 0 4125238..4126041 + 267 121606760 - Pnap_3872 - PAP2 (acid phosphatase) superfamily protein-like protein 3842 65.34 0 4126076..4127509 - 477 121606761 - Pnap_3873 - pyruvate kinase 3843 66.83 0 4127713..4128906 - 397 121606762 pgk Pnap_3874 - phosphoglycerate kinase 3844 66.95 0 4129021..4129374 - 117 121606763 - Pnap_3875 - branched-chain amino acid transport 3845 69.60 +1 4129371..4130120 - 249 121606764 - Pnap_3876 - AzlC family protein 3846 66.05 0 4130117..4131088 - 323 121606765 - Pnap_3877 - methionyl-tRNA formyltransferase 3847 62.45 0 4131156..4131677 - 173 121606766 - Pnap_3878 - peptide deformylase 3848 64.66 0 4131823..4133115 + 430 121606767 - Pnap_3879 - peptidoglycan-binding LysM 3849 56.96 -1 4133447..4134682 + 411 121606768 - Pnap_3880 - IS605 family transposase OrfB 3850 66.50 0 4134675..4135874 + 399 121606769 - Pnap_3881 - DNA protecting protein DprA 3851 59.11 0 4135899..4136414 + 171 121606770 - Pnap_3882 - hypothetical protein 3852 61.72 0 4136442..4138784 - 780 121606771 - Pnap_3883 - hypothetical protein 3853 58.60 0 4138889..4139842 - 317 121606772 secF Pnap_3884 - preprotein translocase subunit SecF 3854 63.21 0 4139881..4141758 - 625 121606773 secD Pnap_3885 - preprotein translocase subunit SecD 3855 60.64 0 4141849..4142130 - 93 121606774 - Pnap_3886 - preprotein translocase, YajC subunit 3856 64.18 0 4142389..4146009 - 1206 121606775 - Pnap_3887 - indolepyruvate ferredoxin oxidoreductase 3857 60.14 0 4146128..4146694 + 188 121606776 - Pnap_3888 - AsnC family transcriptional regulator 3858 54.08 -1 4146742..4147170 + 142 121606777 - Pnap_3889 - hypothetical protein 3859 51.19 -2 4147498..4147833 + 111 121606778 - Pnap_3890 - hypothetical protein 3860 65.04 0 4147972..4150182 - 736 121606779 - Pnap_3891 - hypothetical protein 3861 67.21 0 4150291..4150656 - 121 121606780 - Pnap_3892 - hypothetical protein 3862 68.35 +1 4150675..4151919 - 414 121606781 - Pnap_3893 - MltA domain-containing protein 3863 64.91 0 4152024..4152650 - 208 121606782 - Pnap_3894 - response regulator receiver protein 3864 66.19 0 4152652..4154748 - 698 121606783 - Pnap_3895 - multi-sensor signal transduction histidine kinase 3865 67.41 0 4154753..4155559 - 268 121606784 - Pnap_3896 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3866 67.97 0 4155562..4159701 - 1379 121606785 - Pnap_3897 - hypothetical protein 3867 69.00 +1 4159773..4162562 + 929 121606786 - Pnap_3898 - (glutamate--ammonia-ligase) adenylyltransferase 3868 63.58 0 4162673..4163416 + 247 121606787 - Pnap_3899 - TetR family transcriptional regulator 3869 74.10 +2 4163413..4164879 + 488 121606788 - Pnap_3900 - RND efflux system outer membrane lipoprotein 3870 69.10 +1 4164947..4166137 + 396 121606789 - Pnap_3901 - RND family efflux transporter MFP subunit 3871 67.43 0 4166134..4169268 + 1044 121606790 - Pnap_3902 - acriflavin resistance protein 3872 50.39 -2 4169319..4169576 + 85 121606791 - Pnap_3903 - hypothetical protein 3873 56.47 -1 4169816..4170070 - 84 121606792 - Pnap_3904 - addiction module antitoxin 3874 62.70 0 4170067..4170318 - 83 121606793 - Pnap_3905 - prevent-host-death family protein 3875 66.03 0 4170576..4171514 - 312 121606794 - Pnap_3906 - LysR family transcriptional regulator 3876 67.66 0 4171613..4172620 + 335 121606795 - Pnap_3907 - hypothetical protein 3877 70.71 +1 4172617..4173705 + 362 121606796 - Pnap_3908 - iron-containing alcohol dehydrogenase 3878 64.26 0 4173805..4174800 + 331 121606797 - Pnap_3909 - alcohol dehydrogenase 3879 67.88 0 4174921..4175415 - 164 121606798 - Pnap_3910 - rfaE bifunctional protein 3880 62.76 0 4175412..4176281 - 289 121606799 - Pnap_3911 - hypothetical protein 3881 62.63 0 4176514..4177083 + 189 121606800 - Pnap_3912 - glutathione peroxidase 3882 62.28 0 4177416..4178030 - 204 121606801 - Pnap_3913 - glutathione S-transferase domain-containing protein 3883 62.33 0 4178115..4179566 + 483 121606802 - Pnap_3914 - adenylosuccinate lyase 3884 65.71 0 4179637..4179948 - 103 121606803 - Pnap_3915 - hypothetical protein 3885 65.45 0 4180055..4180465 - 136 121606804 - Pnap_3916 - hypothetical protein 3886 65.97 0 4180921..4181637 + 238 121606805 - Pnap_3917 - integral membrane protein TerC 3887 63.56 0 4181690..4182043 + 117 121606806 - Pnap_3918 - membrane protein of unknown function 3888 70.36 +1 4181999..4183648 - 549 121606807 - Pnap_3919 - peptidase M48, Ste24p 3889 60.92 0 4183729..4184250 + 173 121606808 - Pnap_3920 - molybdenum cofactor biosynthesis protein C 3890 49.59 -2 4184382..4185365 + 327 121606809 - Pnap_3921 - phage integrase family protein 3891 52.88 -1 4185753..4186064 - 103 121606810 - Pnap_3922 - hypothetical protein 3892 51.89 -2 4186476..4186793 + 105 121606811 - Pnap_3923 - hypothetical protein 3893 52.67 -1 4186852..4187880 + 342 121606812 - Pnap_3924 - DNA/RNA non-specific endonuclease 3894 36.15 -2 4188287..4189954 + 555 121606813 - Pnap_3925 - hypothetical protein 3895 36.41 -2 4189958..4191550 + 530 121606814 - Pnap_3926 - DNA-directed DNA polymerase 3896 41.55 -2 4191955..4192380 - 141 121606815 - Pnap_3927 - hypothetical protein 3897 49.83 -2 4192453..4193028 - 191 121606816 - Pnap_3928 - resolvase domain-containing protein 3898 28.46 -2 4193291..4193680 + 129 121606817 - Pnap_3929 - hypothetical protein 3899 40.13 -2 4193869..4195266 + 465 121606818 - Pnap_3930 - hypothetical protein 3900 32.42 -2 4195253..4195690 + 145 121606819 - Pnap_3931 - hypothetical protein 3901 41.37 -2 4195904..4196413 + 169 121606820 - Pnap_3932 - hypothetical protein 3902 38.29 -2 4196732..4197397 + 221 121606821 - Pnap_3933 - hypothetical protein 3903 47.55 -2 4199081..4199467 + 128 121606822 - Pnap_3934 - hypothetical protein 3904 36.76 -2 4200273..4200710 + 145 121606823 - Pnap_3935 - hypothetical protein 3905 43.80 -2 4200712..4200969 + 85 121606824 - Pnap_3936 - hypothetical protein 3906 39.15 -2 4201258..4201842 - 194 121606825 - Pnap_3937 - hypothetical protein 3907 46.84 -2 4202561..4203382 - 273 121606826 - Pnap_3938 - hypothetical protein 3908 47.00 -2 4205401..4205700 - 99 121606827 - Pnap_3939 - histone-like nucleoid-structuring protein H-NS 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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