version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3764 57.27 -1 4046126..4047136 + 336 121606683 - Pnap_3795 - magnesium and cobalt transport protein CorA 3765 62.68 0 4047198..4047974 - 258 121606684 - Pnap_3796 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3766 60.96 0 4048063..4049763 - 566 121606685 - Pnap_3797 - AMP-dependent synthetase and ligase 3767 63.09 0 4049925..4051349 - 474 121606686 - Pnap_3798 - NAD(P) transhydrogenase, beta subunit 3768 63.39 0 4051346..4051681 - 111 121606687 - Pnap_3799 - NAD(P) transhydrogenase, subunit alpha part 2 3769 67.11 0 4051787..4052902 - 371 121606688 - Pnap_3800 - NAD(P)(+) transhydrogenase (AB-specific) 3770 64.00 0 4053155..4054690 - 511 121606689 - Pnap_3801 - methylmalonate-semialdehyde dehydrogenase 3771 68.27 +1 4054805..4055800 + 331 121606690 - Pnap_3802 - LysR family transcriptional regulator 3772 61.55 0 4055815..4056342 + 175 121606691 - Pnap_3803 - NUDIX hydrolase 3773 61.69 0 4056394..4056654 - 86 121606692 - Pnap_3804 - hypothetical protein 3774 69.54 +1 4056671..4058794 + 707 121606693 - Pnap_3805 - hypothetical protein 3775 66.56 0 4058809..4059732 - 307 121606694 - Pnap_3806 - LysR family transcriptional regulator 3776 62.28 0 4059845..4060870 + 341 121606695 - Pnap_3807 - hypothetical protein 3777 67.72 0 4060897..4061754 + 285 121606696 - Pnap_3808 - hypothetical protein 3778 65.23 0 4061776..4062957 + 393 121606697 - Pnap_3809 - L-carnitine dehydratase/bile acid-inducible protein F 3779 71.67 +1 4062960..4063799 + 279 121606698 - Pnap_3810 - HpcH/HpaI aldolase 3780 64.00 0 4063824..4065173 + 449 121606699 - Pnap_3811 - fumarate lyase 3781 66.48 0 4065219..4066301 + 360 121606700 - Pnap_3812 - porin 3782 66.46 0 4066329..4067306 - 325 121606701 - Pnap_3813 - hypothetical protein 3783 68.27 +1 4067336..4068520 - 394 121606702 - Pnap_3814 - CitB domain-containing protein 3784 68.01 0 4068507..4069916 - 469 121606703 - Pnap_3815 - tricarballylate dehydrogenase 3785 69.45 +1 4070000..4070932 - 310 121606704 - Pnap_3816 - LysR family transcriptional regulator 3786 64.98 0 4070983..4072167 + 394 121606705 trmU Pnap_3817 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3787 67.07 0 4072254..4073729 - 491 121606706 - Pnap_3818 - MltA-interacting MipA family protein 3788 67.42 0 4073859..4074386 - 175 121606707 - Pnap_3819 - single-strand binding protein 3789 69.08 +1 4074516..4075880 + 454 121606708 - Pnap_3820 - Cl- channel, voltage-gated family protein 3790 71.40 +1 4075885..4077087 - 400 121606709 - Pnap_3821 - major facilitator superfamily transporter 3791 68.77 +1 4077258..4078112 - 284 121606710 - Pnap_3822 - hypothetical protein 3792 67.84 0 4078125..4078466 - 113 121606711 - Pnap_3823 - hypothetical protein 3793 69.15 +1 4078463..4078744 - 93 121606712 - Pnap_3824 - hypothetical protein 3794 71.22 +1 4078842..4079609 + 255 121606713 - Pnap_3825 - two component transcriptional regulator 3795 72.32 +1 4079606..4080913 + 435 121606714 - Pnap_3826 - integral membrane sensor signal transduction histidine kinase 3796 65.56 0 4080983..4084057 + 1024 121606715 - Pnap_3827 - excinuclease ABC, A subunit 3797 62.29 0 4084139..4085074 + 311 121606716 - Pnap_3828 - hypothetical protein 3798 62.57 0 4085284..4086993 + 569 121606717 - Pnap_3829 - extracellular solute-binding protein 3799 65.75 0 4087011..4088105 + 364 121606718 - Pnap_3830 - binding-protein-dependent transport systems inner membrane component 3800 68.07 0 4088102..4089028 + 308 121606719 - Pnap_3831 - binding-protein-dependent transport systems inner membrane component 3801 68.33 +1 4089025..4089867 + 280 121606720 - Pnap_3832 - ABC transporter related 3802 67.70 0 4089864..4090637 + 257 121606721 - Pnap_3833 - ABC transporter related 3803 62.66 0 4090725..4091747 - 340 121606722 - Pnap_3834 - helix-turn-helix domain-containing protein 3804 66.18 0 4091930..4093381 + 483 121606723 - Pnap_3835 - aldehyde dehydrogenase 3805 61.99 0 4093420..4093740 + 106 121606724 - Pnap_3836 - putative p-cresol methylhydroxylase subunit 3806 67.42 0 4093754..4094284 + 176 121606725 - Pnap_3837 - hypothetical protein 3807 60.17 0 4094298..4095851 + 517 121606726 - Pnap_3838 - FAD linked oxidase domain-containing protein 3808 65.11 0 4095881..4096777 + 298 121606727 - Pnap_3839 - regulation of phenolics degradation protein 3809 68.75 +1 4096811..4097818 + 335 121606728 - Pnap_3840 - peptidase M19, renal dipeptidase 3810 65.56 0 4097851..4098300 + 149 121606729 - Pnap_3841 - thioesterase superfamily protein 3811 65.64 0 4098692..4100641 + 649 121606730 - Pnap_3842 - putative outer membrane protein 3812 68.67 +1 4100700..4101548 - 282 121606731 pyrF Pnap_3843 - orotidine 5'-phosphate decarboxylase 3813 71.54 +1 4101573..4102373 - 266 121606732 - Pnap_3844 - phage SPO1 DNA polymerase-related protein 3814 66.87 0 4102390..4102884 - 164 121606733 - Pnap_3845 - ribosomal-protein-alanine acetyltransferase 3815 70.26 +1 4102891..4103670 - 259 121606734 - Pnap_3846 - peptidase M22, glycoprotease 3816 70.76 +1 4103738..4105324 + 528 121606735 - Pnap_3847 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 3817 65.31 0 4105661..4106545 + 294 121606736 - Pnap_3848 - transglutaminase domain-containing protein 3818 68.62 +1 4106542..4107258 + 238 121606737 - Pnap_3849 - N-formylglutamate amidohydrolase 3819 62.61 0 4107341..4107685 + 114 121606738 - Pnap_3850 - alkylphosphonate utilization operon protein PhnA 3820 62.59 0 4107759..4108028 + 89 121606739 - Pnap_3851 - hypothetical protein 3821 64.94 0 4108048..4109145 - 365 121606740 - Pnap_3852 - alcohol dehydrogenase 3822 58.18 0 4109304..4109633 + 109 121606741 - Pnap_3853 - hypothetical protein 3823 66.67 0 4109660..4110493 + 277 121606742 - Pnap_3854 - iron permease FTR1 3824 65.48 0 4110468..4111223 - 251 121606743 - Pnap_3855 - hypothetical protein 3825 64.35 0 4111357..4112175 + 272 121606744 - Pnap_3856 - Sel1 domain-containing protein 3826 68.84 +1 4112235..4113479 - 414 121606745 - Pnap_3857 - PHB depolymerase family esterase 3827 68.09 0 4113538..4113960 - 140 121606746 - Pnap_3858 - CopG/Arc/MetJ family transcriptional regulator 3828 61.97 0 4114131..4114364 - 77 121606747 - Pnap_3859 - SlyX family protein 3829 63.09 0 4114468..4115613 + 381 121606748 - Pnap_3860 - extracellular ligand-binding receptor 3830 72.26 +1 4115633..4116616 - 327 121606749 - Pnap_3861 - Sua5/YciO/YrdC/YwlC family protein 3831 66.91 0 4116616..4117848 - 410 121606750 - Pnap_3862 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3832 67.45 0 4117845..4118354 - 169 121606751 - Pnap_3863 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 3833 63.96 0 4118559..4119446 + 295 121606752 - Pnap_3864 - thioredoxin domain-containing protein 3834 65.91 0 4119443..4119838 - 131 121606753 - Pnap_3865 - hypothetical protein 3835 64.60 0 4119917..4120498 - 193 121606754 - Pnap_3866 - PfpI family intracellular peptidase 3836 55.27 -1 4120614..4120850 - 78 121606755 - Pnap_3867 - hypothetical protein 3837 66.23 0 4120877..4121794 - 305 121606756 - Pnap_3868 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3838 63.85 0 4121897..4122961 - 354 121606757 - Pnap_3869 - fructose-1,6-bisphosphate aldolase 3839 69.29 +1 4123071..4124480 - 469 121606758 - Pnap_3870 - histidine kinase 3840 68.25 +1 4124477..4125169 - 230 121606759 - Pnap_3871 - two component transcriptional regulator 3841 66.17 0 4125238..4126041 + 267 121606760 - Pnap_3872 - PAP2 (acid phosphatase) superfamily protein-like protein 3842 65.34 0 4126076..4127509 - 477 121606761 - Pnap_3873 - pyruvate kinase 3843 66.83 0 4127713..4128906 - 397 121606762 pgk Pnap_3874 - phosphoglycerate kinase 3844 66.95 0 4129021..4129374 - 117 121606763 - Pnap_3875 - branched-chain amino acid transport 3845 69.60 +1 4129371..4130120 - 249 121606764 - Pnap_3876 - AzlC family protein 3846 66.05 0 4130117..4131088 - 323 121606765 - Pnap_3877 - methionyl-tRNA formyltransferase 3847 62.45 0 4131156..4131677 - 173 121606766 - Pnap_3878 - peptide deformylase 3848 64.66 0 4131823..4133115 + 430 121606767 - Pnap_3879 - peptidoglycan-binding LysM 3849 56.96 -1 4133447..4134682 + 411 121606768 - Pnap_3880 - IS605 family transposase OrfB 3850 66.50 0 4134675..4135874 + 399 121606769 - Pnap_3881 - DNA protecting protein DprA 3851 59.11 0 4135899..4136414 + 171 121606770 - Pnap_3882 - hypothetical protein 3852 61.72 0 4136442..4138784 - 780 121606771 - Pnap_3883 - hypothetical protein 3853 58.60 0 4138889..4139842 - 317 121606772 secF Pnap_3884 - preprotein translocase subunit SecF 3854 63.21 0 4139881..4141758 - 625 121606773 secD Pnap_3885 - preprotein translocase subunit SecD 3855 60.64 0 4141849..4142130 - 93 121606774 - Pnap_3886 - preprotein translocase, YajC subunit 3856 64.18 0 4142389..4146009 - 1206 121606775 - Pnap_3887 - indolepyruvate ferredoxin oxidoreductase 3857 60.14 0 4146128..4146694 + 188 121606776 - Pnap_3888 - AsnC family transcriptional regulator 3858 54.08 -1 4146742..4147170 + 142 121606777 - Pnap_3889 - hypothetical protein 3859 51.19 -2 4147498..4147833 + 111 121606778 - Pnap_3890 - hypothetical protein 3860 65.04 0 4147972..4150182 - 736 121606779 - Pnap_3891 - hypothetical protein 3861 67.21 0 4150291..4150656 - 121 121606780 - Pnap_3892 - hypothetical protein 3862 68.35 +1 4150675..4151919 - 414 121606781 - Pnap_3893 - MltA domain-containing protein 3863 64.91 0 4152024..4152650 - 208 121606782 - Pnap_3894 - response regulator receiver protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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