version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3728 66.53 0 4008102..4008809 - 235 121606647 - Pnap_3759 - nitrate reductase molybdenum cofactor assembly chaperone 3729 62.82 0 4008813..4010345 - 510 121606648 - Pnap_3760 - nitrate reductase, beta subunit 3730 63.35 0 4010342..4014172 - 1276 121606649 - Pnap_3761 - nitrate reductase, alpha subunit 3731 62.89 0 4014217..4015884 - 555 121606650 - Pnap_3762 - nitrate/nitrite antiporter 3732 62.76 0 4015913..4017166 - 417 121606651 - Pnap_3763 - major facilitator superfamily transporter 3733 67.53 0 4017350..4018048 - 232 121606652 - Pnap_3764 - two component LuxR family transcriptional regulator 3734 66.56 0 4018199..4020115 - 638 121606653 - Pnap_3765 - multi-sensor signal transduction histidine kinase 3735 56.91 -1 4020475..4020720 + 81 121606654 - Pnap_3766 - hypothetical protein 3736 52.13 -1 4020794..4021591 - 265 121606655 - Pnap_3767 - hypothetical protein 3737 58.33 0 4021683..4021886 + 67 121606656 - Pnap_3768 - integrase 3738 66.94 0 4022153..4023256 - 367 121606657 holA Pnap_3769 - DNA polymerase III subunit delta 3739 63.38 0 4023280..4023705 - 141 121606658 - Pnap_3770 - AsnC family transcriptional regulator 3740 63.21 0 4023833..4024930 + 365 121606659 - Pnap_3771 - ornithine cyclodeaminase 3741 66.78 0 4024973..4025890 + 305 121606660 - Pnap_3772 - arginase 3742 68.29 +1 4025904..4026581 - 225 121606661 - Pnap_3773 - hypothetical protein 3743 57.85 0 4026591..4027997 - 468 121606662 - Pnap_3774 - coproporphyrinogen III oxidase 3744 55.64 -1 4028139..4028936 + 265 121606663 - Pnap_3775 - CRP/FNR family transcriptional regulator 3745 59.47 0 4029000..4029263 - 87 121606664 - Pnap_3776 - hypothetical protein 3746 53.26 -1 4029315..4029575 - 86 121606665 - Pnap_3777 - hypothetical protein 3747 53.78 -1 4029590..4031056 - 488 121606666 - Pnap_3778 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3748 54.29 -1 4031105..4032025 - 306 121606667 - Pnap_3779 - cytochrome c oxidase, cbb3-type, subunit III 3749 51.02 -2 4032059..4032205 - 48 121606668 - Pnap_3780 - Cbb3-type cytochrome oxidase component 3750 55.98 -1 4032221..4032847 - 208 121606669 - Pnap_3781 - cytochrome c oxidase, cbb3-type, subunit II 3751 57.69 0 4032861..4034297 - 478 121606670 - Pnap_3782 - cytochrome c oxidase, cbb3-type, subunit I 3752 47.52 -2 4034364..4034504 - 46 121606671 - Pnap_3783 - cytochrome oxidase maturation protein, cbb3-type 3753 66.58 0 4034501..4036828 - 775 121606672 - Pnap_3784 - heavy metal translocating P-type ATPase 3754 62.60 0 4036952..4037467 - 171 121606673 - Pnap_3785 - rare lipoprotein B 3755 61.53 0 4037492..4040158 - 888 121606674 - Pnap_3786 - leucyl-tRNA synthetase 3756 64.65 0 4040254..4040700 - 148 121606675 - Pnap_3787 - biopolymer transport protein ExbD/TolR 3757 65.55 0 4040697..4041410 - 237 121606676 - Pnap_3788 - MotA/TolQ/ExbB proton channel 3758 64.58 0 4041418..4042233 - 271 121606677 - Pnap_3789 - dihydrodipicolinate reductase 3759 56.59 -1 4042245..4042859 - 204 121606678 - Pnap_3790 - SmpA/OmlA domain-containing protein 3760 58.17 0 4042938..4043396 + 152 121606679 - Pnap_3791 - ferric uptake regulator family protein 3761 61.83 0 4043488..4044438 - 316 121606680 - Pnap_3792 - HPr kinase/phosphorylase 3762 57.17 -1 4044467..4044940 - 157 121606681 - Pnap_3793 - PTS IIA-like nitrogen-regulatory protein PtsN 3763 50.45 -2 4045148..4045480 - 110 121606682 - Pnap_3794 - sigma 54 modulation protein/ribosomal protein S30EA 3764 57.27 -1 4046126..4047136 + 336 121606683 - Pnap_3795 - magnesium and cobalt transport protein CorA 3765 62.68 0 4047198..4047974 - 258 121606684 - Pnap_3796 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3766 60.96 0 4048063..4049763 - 566 121606685 - Pnap_3797 - AMP-dependent synthetase and ligase 3767 63.09 0 4049925..4051349 - 474 121606686 - Pnap_3798 - NAD(P) transhydrogenase, beta subunit 3768 63.39 0 4051346..4051681 - 111 121606687 - Pnap_3799 - NAD(P) transhydrogenase, subunit alpha part 2 3769 67.11 0 4051787..4052902 - 371 121606688 - Pnap_3800 - NAD(P)(+) transhydrogenase (AB-specific) 3770 64.00 0 4053155..4054690 - 511 121606689 - Pnap_3801 - methylmalonate-semialdehyde dehydrogenase 3771 68.27 +1 4054805..4055800 + 331 121606690 - Pnap_3802 - LysR family transcriptional regulator 3772 61.55 0 4055815..4056342 + 175 121606691 - Pnap_3803 - NUDIX hydrolase 3773 61.69 0 4056394..4056654 - 86 121606692 - Pnap_3804 - hypothetical protein 3774 69.54 +1 4056671..4058794 + 707 121606693 - Pnap_3805 - hypothetical protein 3775 66.56 0 4058809..4059732 - 307 121606694 - Pnap_3806 - LysR family transcriptional regulator 3776 62.28 0 4059845..4060870 + 341 121606695 - Pnap_3807 - hypothetical protein 3777 67.72 0 4060897..4061754 + 285 121606696 - Pnap_3808 - hypothetical protein 3778 65.23 0 4061776..4062957 + 393 121606697 - Pnap_3809 - L-carnitine dehydratase/bile acid-inducible protein F 3779 71.67 +1 4062960..4063799 + 279 121606698 - Pnap_3810 - HpcH/HpaI aldolase 3780 64.00 0 4063824..4065173 + 449 121606699 - Pnap_3811 - fumarate lyase 3781 66.48 0 4065219..4066301 + 360 121606700 - Pnap_3812 - porin 3782 66.46 0 4066329..4067306 - 325 121606701 - Pnap_3813 - hypothetical protein 3783 68.27 +1 4067336..4068520 - 394 121606702 - Pnap_3814 - CitB domain-containing protein 3784 68.01 0 4068507..4069916 - 469 121606703 - Pnap_3815 - tricarballylate dehydrogenase 3785 69.45 +1 4070000..4070932 - 310 121606704 - Pnap_3816 - LysR family transcriptional regulator 3786 64.98 0 4070983..4072167 + 394 121606705 trmU Pnap_3817 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3787 67.07 0 4072254..4073729 - 491 121606706 - Pnap_3818 - MltA-interacting MipA family protein 3788 67.42 0 4073859..4074386 - 175 121606707 - Pnap_3819 - single-strand binding protein 3789 69.08 +1 4074516..4075880 + 454 121606708 - Pnap_3820 - Cl- channel, voltage-gated family protein 3790 71.40 +1 4075885..4077087 - 400 121606709 - Pnap_3821 - major facilitator superfamily transporter 3791 68.77 +1 4077258..4078112 - 284 121606710 - Pnap_3822 - hypothetical protein 3792 67.84 0 4078125..4078466 - 113 121606711 - Pnap_3823 - hypothetical protein 3793 69.15 +1 4078463..4078744 - 93 121606712 - Pnap_3824 - hypothetical protein 3794 71.22 +1 4078842..4079609 + 255 121606713 - Pnap_3825 - two component transcriptional regulator 3795 72.32 +1 4079606..4080913 + 435 121606714 - Pnap_3826 - integral membrane sensor signal transduction histidine kinase 3796 65.56 0 4080983..4084057 + 1024 121606715 - Pnap_3827 - excinuclease ABC, A subunit 3797 62.29 0 4084139..4085074 + 311 121606716 - Pnap_3828 - hypothetical protein 3798 62.57 0 4085284..4086993 + 569 121606717 - Pnap_3829 - extracellular solute-binding protein 3799 65.75 0 4087011..4088105 + 364 121606718 - Pnap_3830 - binding-protein-dependent transport systems inner membrane component 3800 68.07 0 4088102..4089028 + 308 121606719 - Pnap_3831 - binding-protein-dependent transport systems inner membrane component 3801 68.33 +1 4089025..4089867 + 280 121606720 - Pnap_3832 - ABC transporter related 3802 67.70 0 4089864..4090637 + 257 121606721 - Pnap_3833 - ABC transporter related 3803 62.66 0 4090725..4091747 - 340 121606722 - Pnap_3834 - helix-turn-helix domain-containing protein 3804 66.18 0 4091930..4093381 + 483 121606723 - Pnap_3835 - aldehyde dehydrogenase 3805 61.99 0 4093420..4093740 + 106 121606724 - Pnap_3836 - putative p-cresol methylhydroxylase subunit 3806 67.42 0 4093754..4094284 + 176 121606725 - Pnap_3837 - hypothetical protein 3807 60.17 0 4094298..4095851 + 517 121606726 - Pnap_3838 - FAD linked oxidase domain-containing protein 3808 65.11 0 4095881..4096777 + 298 121606727 - Pnap_3839 - regulation of phenolics degradation protein 3809 68.75 +1 4096811..4097818 + 335 121606728 - Pnap_3840 - peptidase M19, renal dipeptidase 3810 65.56 0 4097851..4098300 + 149 121606729 - Pnap_3841 - thioesterase superfamily protein 3811 65.64 0 4098692..4100641 + 649 121606730 - Pnap_3842 - putative outer membrane protein 3812 68.67 +1 4100700..4101548 - 282 121606731 pyrF Pnap_3843 - orotidine 5'-phosphate decarboxylase 3813 71.54 +1 4101573..4102373 - 266 121606732 - Pnap_3844 - phage SPO1 DNA polymerase-related protein 3814 66.87 0 4102390..4102884 - 164 121606733 - Pnap_3845 - ribosomal-protein-alanine acetyltransferase 3815 70.26 +1 4102891..4103670 - 259 121606734 - Pnap_3846 - peptidase M22, glycoprotease 3816 70.76 +1 4103738..4105324 + 528 121606735 - Pnap_3847 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 3817 65.31 0 4105661..4106545 + 294 121606736 - Pnap_3848 - transglutaminase domain-containing protein 3818 68.62 +1 4106542..4107258 + 238 121606737 - Pnap_3849 - N-formylglutamate amidohydrolase 3819 62.61 0 4107341..4107685 + 114 121606738 - Pnap_3850 - alkylphosphonate utilization operon protein PhnA 3820 62.59 0 4107759..4108028 + 89 121606739 - Pnap_3851 - hypothetical protein 3821 64.94 0 4108048..4109145 - 365 121606740 - Pnap_3852 - alcohol dehydrogenase 3822 58.18 0 4109304..4109633 + 109 121606741 - Pnap_3853 - hypothetical protein 3823 66.67 0 4109660..4110493 + 277 121606742 - Pnap_3854 - iron permease FTR1 3824 65.48 0 4110468..4111223 - 251 121606743 - Pnap_3855 - hypothetical protein 3825 64.35 0 4111357..4112175 + 272 121606744 - Pnap_3856 - Sel1 domain-containing protein 3826 68.84 +1 4112235..4113479 - 414 121606745 - Pnap_3857 - PHB depolymerase family esterase 3827 68.09 0 4113538..4113960 - 140 121606746 - Pnap_3858 - CopG/Arc/MetJ family transcriptional regulator 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0