version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 326 55.56 -1 334415..334783 + 122 121603245 - Pnap_0330 - ribosomal protein L14 327 52.96 -1 334796..335116 + 106 121603246 - Pnap_0331 - ribosomal protein L24 328 56.11 -1 335119..335658 + 179 121603247 rplE Pnap_0332 - 50S ribosomal protein L5 329 55.56 -1 335667..335972 + 101 121603248 - Pnap_0333 - ribosomal protein S14 330 55.56 -1 335991..336386 + 131 121603249 - Pnap_0334 - ribosomal protein S8 331 53.93 -1 336411..336944 + 177 121603250 - Pnap_0335 - ribosomal protein L6 332 55.46 -1 336956..337321 + 121 121603251 - Pnap_0336 - ribosomal protein L18P/L5E 333 56.07 -1 337339..337857 + 172 121603252 rpsE Pnap_0337 - 30S ribosomal protein S5 334 55.19 -1 337871..338053 + 60 121603253 - Pnap_0338 - ribosomal protein L30 335 57.41 -1 338067..338498 + 143 121603254 - Pnap_0339 - ribosomal protein L15 336 50.08 -2 338518..339825 + 435 121603255 secY Pnap_0340 - preprotein translocase subunit SecY 337 51.75 -2 339911..340024 + 37 121603256 - Pnap_0341 - ribosomal protein L36 338 54.64 -1 340050..340415 + 121 121603257 rpsM Pnap_0342 - 30S ribosomal protein S13 339 55.80 -1 340429..340833 + 134 121603258 - Pnap_0343 - 30S ribosomal protein S11 340 54.49 -1 340964..341587 + 207 121603259 rpsD Pnap_0344 - 30S ribosomal protein S4 341 51.96 -2 341683..342675 + 330 121603260 - Pnap_0345 - DNA-directed RNA polymerase subunit alpha 342 55.22 -1 342759..343160 + 133 121603261 - Pnap_0346 - ribosomal protein L17 343 69.93 +1 343429..343887 + 152 121603262 - Pnap_0347 - hypothetical protein 344 67.51 0 343907..344383 + 158 121603263 - Pnap_0348 - putative transposase of insertion sequence ISRm10-1 345 59.68 0 344375..345706 - 443 121603264 - Pnap_0349 - sodium/hydrogen exchanger 346 62.60 0 345932..347137 - 401 121603265 - Pnap_0350 - phospholipase A1 347 61.61 0 347159..347731 - 190 121603266 - Pnap_0351 - hypothetical protein 348 63.43 0 347808..349937 - 709 121603267 - Pnap_0352 - UvrD/REP helicase 349 64.88 0 350042..351274 - 410 121603268 - Pnap_0353 - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase 350 66.61 0 351271..353049 - 592 121603269 - Pnap_0354 - putative bifunctional OHCU decarboxylase/allantoate amidohydrolase 351 66.14 0 353046..353999 - 317 121603270 - Pnap_0355 - polysaccharide deacetylase 352 66.67 0 354171..354527 + 118 121603271 - Pnap_0356 - transthyretin 353 63.71 0 354524..355741 + 405 121603272 - Pnap_0357 - hypothetical protein 354 65.87 0 355874..356878 - 334 121603273 - Pnap_0358 - ATPase central domain-containing protein 355 62.69 0 357176..359512 + 778 121603274 - Pnap_0359 - PAS/PAC sensor signal transduction histidine kinase 356 63.40 0 359491..360561 - 356 121603275 - Pnap_0360 - hypothetical protein 357 54.44 -1 360685..361191 + 168 121603276 - Pnap_0361 - hypothetical protein 358 68.59 +1 361263..363392 - 709 121603277 - Pnap_0362 - primosomal protein N' 359 66.22 0 363768..364877 - 369 121603278 - Pnap_0363 - uroporphyrinogen decarboxylase 360 62.57 0 364982..365347 + 121 121603279 - Pnap_0364 - hypothetical protein 361 64.86 0 365438..365770 - 110 121603280 - Pnap_0365 - hypothetical protein 362 64.82 0 365781..366377 - 198 121603281 - Pnap_0366 - hypothetical protein 363 63.46 0 366415..366819 - 134 121603282 - Pnap_0367 - roadblock/LC7 family protein 364 57.11 -1 366906..367313 - 135 121603283 - Pnap_0368 - hypothetical protein 365 63.74 0 367341..368777 - 478 121603284 - Pnap_0369 - ABC transporter related 366 58.51 0 368774..369337 - 187 121603285 - Pnap_0370 - protein of unknown function, ATP binding 367 60.80 0 369366..369740 - 124 121603286 - Pnap_0371 - hypothetical protein 368 65.08 0 369880..371205 - 441 121603287 - Pnap_0372 - methyltransferase type 12 369 52.63 -1 371606..372061 + 151 121603288 - Pnap_0373 - hypothetical protein 370 68.16 0 372171..372905 - 244 121603289 - Pnap_0374 - putative lipoprotein 371 66.02 0 372909..373373 - 154 121603290 - Pnap_0375 - CoA-binding domain-containing protein 372 69.41 +1 373443..375590 - 715 121603291 - Pnap_0376 - cytochrome c biogenesis protein, transmembrane region 373 65.05 0 375774..376268 + 164 121603292 - Pnap_0377 - XRE family transcriptional regulator 374 62.23 0 376278..376976 + 232 121603293 - Pnap_0378 - hypothetical protein 375 66.67 0 377049..377372 - 107 121603294 - Pnap_0379 - hypothetical protein 376 64.91 0 377538..378107 + 189 121603295 - Pnap_0380 - cytochrome B561 377 60.61 0 378109..378603 + 164 121603296 - Pnap_0381 - hypothetical protein 378 58.26 0 378619..378939 + 106 121603297 - Pnap_0382 - hypothetical protein 379 72.46 +1 378995..379996 - 333 121603298 - Pnap_0383 - hypothetical protein 380 35.77 -2 380445..382046 - 533 121603299 - Pnap_0384 - hypothetical protein 381 58.14 0 382417..382674 + 85 121603300 - Pnap_0385 - hypothetical protein 382 61.39 0 382949..383554 + 201 121603301 - Pnap_0386 - helix-turn-helix domain-containing protein 383 65.40 0 383746..385404 + 552 121603302 - Pnap_0387 - radical SAM domain-containing protein 384 60.24 0 385516..385935 + 139 121603303 - Pnap_0388 - hypothetical protein 385 65.99 0 385951..387585 + 544 121603304 - Pnap_0389 - chaperonin GroEL 386 64.49 0 387609..388067 + 152 121603305 - Pnap_0390 - hypothetical protein 387 63.64 0 388119..388547 + 142 121603306 - Pnap_0391 - UspA domain-containing protein 388 67.15 0 388540..390396 - 618 121603307 - Pnap_0392 - ATP-dependent metalloprotease FtsH 389 65.52 0 390553..390900 + 115 121603308 - Pnap_0393 - hypothetical protein 390 66.32 0 390986..391855 + 289 121603309 - Pnap_0394 - creatininase 391 67.26 0 392221..393561 + 446 121603310 - Pnap_0395 - L-sorbosone dehydrogenase 392 65.32 0 393640..394308 - 222 121603311 - Pnap_0396 - phosphoglycerate mutase 393 64.73 0 394345..396612 - 755 121603312 - Pnap_0397 - integral membrane sensor hybrid histidine kinase 394 55.64 -1 396843..397241 - 132 121603313 - Pnap_0398 - response regulator receiver protein 395 59.51 0 397480..398220 - 246 121603314 - Pnap_0399 - hypothetical protein 396 67.74 0 398447..399379 - 310 121603315 - Pnap_0400 - PhzF family phenazine biosynthesis protein 397 67.49 0 399420..400640 - 406 121603316 - Pnap_0401 - GntR family transcriptional regulator 398 69.12 +1 400694..401629 - 311 121603317 - Pnap_0402 - hypothetical protein 399 66.24 0 401856..403277 + 473 121603318 - Pnap_0403 - GntR family transcriptional regulator 400 62.80 0 403967..404509 + 180 121603319 - Pnap_0404 - hypothetical protein 401 61.86 0 404675..407608 + 977 121603320 - Pnap_0405 - hypothetical protein 402 61.07 0 407611..414867 + 2418 121603321 - Pnap_0406 - hypothetical protein 403 60.13 0 415038..418895 + 1285 121603322 - Pnap_0407 - hypothetical protein 404 57.38 -1 419056..419238 - 60 121603323 - Pnap_0408 - hypothetical protein 405 60.71 0 419263..419430 - 55 121603324 - Pnap_0409 - transposase, IS4 406 67.51 0 419901..420377 - 158 121603325 - Pnap_0410 - putative transposase of insertion sequence ISRm10-1 407 69.93 +1 420397..420855 - 152 121603326 - Pnap_0411 - hypothetical protein 408 63.64 0 421048..422730 - 560 121603327 - Pnap_0412 - phospholipase D/transphosphatidylase 409 60.90 0 422891..424816 - 641 121603328 - Pnap_0413 - ABC transporter related 410 66.12 0 431209..431571 + 120 121603329 - Pnap_0414 - hypothetical protein 411 63.86 0 431574..433643 + 689 121603330 - Pnap_0415 - recombinase 412 60.85 0 433656..434240 - 194 121603331 - Pnap_0416 - transposase IS66 413 58.67 0 434614..435651 - 345 121603332 - Pnap_0418 - ISXo7 transposase 414 64.04 0 435689..436183 - 164 121603333 - Pnap_0419 - IS4 family transposase 415 59.65 0 436531..437613 - 360 121603334 - Pnap_0420 - transposase IS116/IS110/IS902 family protein 416 62.41 0 437610..438173 - 187 121603335 - Pnap_0421 - hypothetical protein 417 65.82 0 438226..439050 - 274 121603336 - Pnap_0422 - transposase IS66 418 66.67 0 439115..439402 - 95 121603337 - Pnap_0423 - IS66 Orf2 family protein 419 64.96 0 439444..439854 - 136 121603338 - Pnap_0424 - transposase IS3/IS911 family protein 420 61.06 0 439931..441178 - 415 121603339 - Pnap_0425 - transposase, IS4 family protein 421 59.08 0 441484..442551 + 355 121603340 - Pnap_0426 - transposase IS116/IS110/IS902 family protein 422 64.75 0 442923..443963 + 346 121603341 - Pnap_0427 - transposase IS116/IS110/IS902 family protein 423 59.51 0 444129..444617 + 162 121603342 - Pnap_0428 - hypothetical protein 424 60.94 0 444542..445519 - 325 121603343 - Pnap_0429 - integrase catalytic subunit 425 57.67 0 445572..445871 - 99 121603344 - Pnap_0430 - transposase IS3/IS911 family protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0