version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3687 64.96 0 3958729..3960429 - 566 121606606 - Pnap_3718 - NAD+ synthetase 3688 63.32 0 3960443..3961636 - 397 121606607 - Pnap_3719 - nicotinate phosphoribosyltransferase 3689 67.57 0 3961670..3962551 - 293 121606608 - Pnap_3720 - hypothetical protein 3690 66.67 0 3962683..3963375 + 230 121606609 - Pnap_3721 - NUDIX hydrolase 3691 64.47 0 3963467..3964285 + 272 121606610 - Pnap_3722 - SecC motif-containing protein 3692 49.06 -2 3964419..3964844 - 141 121606611 - Pnap_3723 - hypothetical protein 3693 59.37 0 3965172..3966116 + 314 121606612 - Pnap_3724 - ISXo7 transposase 3694 67.76 0 3966149..3966787 - 212 121606613 - Pnap_3725 - hypothetical protein 3695 62.38 0 3967045..3968538 + 497 121606614 - Pnap_3726 - methyltransferase type 12 3696 62.93 0 3968535..3969872 + 445 121606615 - Pnap_3727 - integral membrane sensor signal transduction histidine kinase 3697 70.20 +1 3969886..3971073 + 395 121606616 - Pnap_3728 - response regulator receiver sensor signal transduction histidine kinase 3698 68.93 +1 3971077..3972048 + 323 121606617 - Pnap_3729 - response regulator receiver protein 3699 65.89 0 3972052..3972567 - 171 121606618 - Pnap_3730 - hypothetical protein 3700 69.61 +1 3972724..3974526 + 600 121606619 - Pnap_3731 - arsenite-activated ATPase ArsA 3701 70.33 +1 3975145..3975963 + 272 121606620 - Pnap_3732 - restriction endonuclease 3702 59.38 0 3976150..3976341 + 63 121606621 - Pnap_3733 - 4-oxalocrotonate tautomerase 3703 65.91 0 3976376..3977173 + 265 121606622 - Pnap_3734 - glutamine amidotransferase, class-II 3704 62.95 0 3977368..3978606 + 412 121606623 - Pnap_3735 - hypothetical protein 3705 64.99 0 3978626..3979579 - 317 121606624 - Pnap_3736 - glutathione synthetase 3706 70.78 +1 3980043..3981428 + 461 121606625 - Pnap_3737 - zinc finger SWIM domain-containing protein 3707 71.08 +1 3981425..3983011 + 528 121606626 - Pnap_3738 - hypothetical protein 3708 66.12 0 3983014..3984111 + 365 121606627 - Pnap_3739 - ATPase 3709 69.74 +1 3984108..3986549 + 813 121606628 - Pnap_3740 - hypothetical protein 3710 38.70 -2 3986657..3987010 + 117 121606629 - Pnap_3741 - hypothetical protein 3711 68.73 +1 3987311..3988522 + 403 121606630 - Pnap_3742 - VWA containing CoxE family protein 3712 59.74 0 3988633..3989094 + 153 121606631 - Pnap_3743 - hypothetical protein 3713 62.33 0 3989113..3989757 + 214 121606632 - Pnap_3744 - FMN-binding negative transcriptional regulator 3714 66.67 0 3989770..3990381 - 203 121606633 - Pnap_3745 - response regulator receiver protein 3715 70.56 +1 3990405..3992384 - 659 121606634 - Pnap_3746 - multi-sensor signal transduction histidine kinase 3716 68.08 0 3992400..3993464 + 354 121606635 - Pnap_3747 - TRAP dicarboxylate transporter, DctP subunit 3717 61.99 0 3993618..3994964 + 448 121606636 - Pnap_3748 - C4-dicarboxylate transporter DctA 3718 61.26 0 3995086..3996954 - 622 121606637 - Pnap_3749 - K+ potassium transporter 3719 62.27 0 3997270..3998565 - 431 121606638 - Pnap_3750 - glutamate--cysteine ligase 3720 64.27 0 3998795..4000087 - 430 121606639 - Pnap_3751 - gamma-glutamyl phosphate reductase 3721 68.88 +1 4000110..4000652 - 180 121606640 - Pnap_3752 - hypothetical protein 3722 69.14 +1 4000750..4001154 - 134 121606641 - Pnap_3753 - hypothetical protein 3723 69.38 +1 4001219..4001881 - 220 121606642 - Pnap_3754 - nitroreductase 3724 67.85 0 4001932..4005486 - 1184 121606643 - Pnap_3755 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 3725 66.09 0 4005777..4006469 - 230 121606644 - Pnap_3756 - carbonate dehydratase 3726 66.20 0 4006466..4007314 - 282 121606645 - Pnap_3757 - PpiC-type peptidyl-prolyl cis-trans isomerase 3727 63.40 0 4007311..4008105 - 264 121606646 - Pnap_3758 - respiratory nitrate reductase, gamma subunit 3728 66.53 0 4008102..4008809 - 235 121606647 - Pnap_3759 - nitrate reductase molybdenum cofactor assembly chaperone 3729 62.82 0 4008813..4010345 - 510 121606648 - Pnap_3760 - nitrate reductase, beta subunit 3730 63.35 0 4010342..4014172 - 1276 121606649 - Pnap_3761 - nitrate reductase, alpha subunit 3731 62.89 0 4014217..4015884 - 555 121606650 - Pnap_3762 - nitrate/nitrite antiporter 3732 62.76 0 4015913..4017166 - 417 121606651 - Pnap_3763 - major facilitator superfamily transporter 3733 67.53 0 4017350..4018048 - 232 121606652 - Pnap_3764 - two component LuxR family transcriptional regulator 3734 66.56 0 4018199..4020115 - 638 121606653 - Pnap_3765 - multi-sensor signal transduction histidine kinase 3735 56.91 -1 4020475..4020720 + 81 121606654 - Pnap_3766 - hypothetical protein 3736 52.13 -1 4020794..4021591 - 265 121606655 - Pnap_3767 - hypothetical protein 3737 58.33 0 4021683..4021886 + 67 121606656 - Pnap_3768 - integrase 3738 66.94 0 4022153..4023256 - 367 121606657 holA Pnap_3769 - DNA polymerase III subunit delta 3739 63.38 0 4023280..4023705 - 141 121606658 - Pnap_3770 - AsnC family transcriptional regulator 3740 63.21 0 4023833..4024930 + 365 121606659 - Pnap_3771 - ornithine cyclodeaminase 3741 66.78 0 4024973..4025890 + 305 121606660 - Pnap_3772 - arginase 3742 68.29 +1 4025904..4026581 - 225 121606661 - Pnap_3773 - hypothetical protein 3743 57.85 0 4026591..4027997 - 468 121606662 - Pnap_3774 - coproporphyrinogen III oxidase 3744 55.64 -1 4028139..4028936 + 265 121606663 - Pnap_3775 - CRP/FNR family transcriptional regulator 3745 59.47 0 4029000..4029263 - 87 121606664 - Pnap_3776 - hypothetical protein 3746 53.26 -1 4029315..4029575 - 86 121606665 - Pnap_3777 - hypothetical protein 3747 53.78 -1 4029590..4031056 - 488 121606666 - Pnap_3778 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3748 54.29 -1 4031105..4032025 - 306 121606667 - Pnap_3779 - cytochrome c oxidase, cbb3-type, subunit III 3749 51.02 -2 4032059..4032205 - 48 121606668 - Pnap_3780 - Cbb3-type cytochrome oxidase component 3750 55.98 -1 4032221..4032847 - 208 121606669 - Pnap_3781 - cytochrome c oxidase, cbb3-type, subunit II 3751 57.69 0 4032861..4034297 - 478 121606670 - Pnap_3782 - cytochrome c oxidase, cbb3-type, subunit I 3752 47.52 -2 4034364..4034504 - 46 121606671 - Pnap_3783 - cytochrome oxidase maturation protein, cbb3-type 3753 66.58 0 4034501..4036828 - 775 121606672 - Pnap_3784 - heavy metal translocating P-type ATPase 3754 62.60 0 4036952..4037467 - 171 121606673 - Pnap_3785 - rare lipoprotein B 3755 61.53 0 4037492..4040158 - 888 121606674 - Pnap_3786 - leucyl-tRNA synthetase 3756 64.65 0 4040254..4040700 - 148 121606675 - Pnap_3787 - biopolymer transport protein ExbD/TolR 3757 65.55 0 4040697..4041410 - 237 121606676 - Pnap_3788 - MotA/TolQ/ExbB proton channel 3758 64.58 0 4041418..4042233 - 271 121606677 - Pnap_3789 - dihydrodipicolinate reductase 3759 56.59 -1 4042245..4042859 - 204 121606678 - Pnap_3790 - SmpA/OmlA domain-containing protein 3760 58.17 0 4042938..4043396 + 152 121606679 - Pnap_3791 - ferric uptake regulator family protein 3761 61.83 0 4043488..4044438 - 316 121606680 - Pnap_3792 - HPr kinase/phosphorylase 3762 57.17 -1 4044467..4044940 - 157 121606681 - Pnap_3793 - PTS IIA-like nitrogen-regulatory protein PtsN 3763 50.45 -2 4045148..4045480 - 110 121606682 - Pnap_3794 - sigma 54 modulation protein/ribosomal protein S30EA 3764 57.27 -1 4046126..4047136 + 336 121606683 - Pnap_3795 - magnesium and cobalt transport protein CorA 3765 62.68 0 4047198..4047974 - 258 121606684 - Pnap_3796 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3766 60.96 0 4048063..4049763 - 566 121606685 - Pnap_3797 - AMP-dependent synthetase and ligase 3767 63.09 0 4049925..4051349 - 474 121606686 - Pnap_3798 - NAD(P) transhydrogenase, beta subunit 3768 63.39 0 4051346..4051681 - 111 121606687 - Pnap_3799 - NAD(P) transhydrogenase, subunit alpha part 2 3769 67.11 0 4051787..4052902 - 371 121606688 - Pnap_3800 - NAD(P)(+) transhydrogenase (AB-specific) 3770 64.00 0 4053155..4054690 - 511 121606689 - Pnap_3801 - methylmalonate-semialdehyde dehydrogenase 3771 68.27 +1 4054805..4055800 + 331 121606690 - Pnap_3802 - LysR family transcriptional regulator 3772 61.55 0 4055815..4056342 + 175 121606691 - Pnap_3803 - NUDIX hydrolase 3773 61.69 0 4056394..4056654 - 86 121606692 - Pnap_3804 - hypothetical protein 3774 69.54 +1 4056671..4058794 + 707 121606693 - Pnap_3805 - hypothetical protein 3775 66.56 0 4058809..4059732 - 307 121606694 - Pnap_3806 - LysR family transcriptional regulator 3776 62.28 0 4059845..4060870 + 341 121606695 - Pnap_3807 - hypothetical protein 3777 67.72 0 4060897..4061754 + 285 121606696 - Pnap_3808 - hypothetical protein 3778 65.23 0 4061776..4062957 + 393 121606697 - Pnap_3809 - L-carnitine dehydratase/bile acid-inducible protein F 3779 71.67 +1 4062960..4063799 + 279 121606698 - Pnap_3810 - HpcH/HpaI aldolase 3780 64.00 0 4063824..4065173 + 449 121606699 - Pnap_3811 - fumarate lyase 3781 66.48 0 4065219..4066301 + 360 121606700 - Pnap_3812 - porin 3782 66.46 0 4066329..4067306 - 325 121606701 - Pnap_3813 - hypothetical protein 3783 68.27 +1 4067336..4068520 - 394 121606702 - Pnap_3814 - CitB domain-containing protein 3784 68.01 0 4068507..4069916 - 469 121606703 - Pnap_3815 - tricarballylate dehydrogenase 3785 69.45 +1 4070000..4070932 - 310 121606704 - Pnap_3816 - LysR family transcriptional regulator 3786 64.98 0 4070983..4072167 + 394 121606705 trmU Pnap_3817 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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