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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3558 62.59 0 3813401..3814063 + 220 121606477 - Pnap_3589 - hypothetical protein 3559 64.51 0 3814083..3814730 + 215 121606478 - Pnap_3590 - hypothetical protein 3560 66.25 0 3814731..3815213 + 160 121606479 - Pnap_3591 - hypothetical protein 3561 66.06 0 3815210..3816037 + 275 121606480 - Pnap_3592 - hypothetical protein 3562 71.93 +1 3816034..3818121 + 695 121606481 - Pnap_3593 - hypothetical protein 3563 71.70 +1 3818185..3819534 - 449 121606482 - Pnap_3594 - PGAP1 family protein 3564 69.06 +1 3819672..3820508 - 278 121606483 - Pnap_3595 - pseudouridine synthase 3565 70.25 +1 3820620..3821177 + 185 121606484 - Pnap_3596 - putative transmembrane protein 3566 67.91 0 3821202..3821846 - 214 121606485 - Pnap_3597 - two component LuxR family transcriptional regulator 3567 72.42 +1 3821843..3823162 - 439 121606486 - Pnap_3598 - integral membrane sensor signal transduction histidine kinase 3568 67.48 0 3823415..3825883 + 822 121606487 - Pnap_3599 - TonB-dependent receptor 3569 70.20 +1 3825987..3826694 - 235 121606488 - Pnap_3600 - two component transcriptional regulator 3570 70.70 +1 3826704..3829403 - 899 121606489 - Pnap_3601 - osmosensitive K+ channel signal transduction histidine kinase 3571 69.71 +1 3829422..3830012 - 196 121606490 - Pnap_3602 - potassium-transporting ATPase, C subunit 3572 66.19 0 3830032..3832110 - 692 121606491 - Pnap_3603 - K+-transporting ATPase, B subunit 3573 66.00 0 3832130..3833929 - 599 121606492 - Pnap_3604 - potassium-transporting ATPase, A subunit 3574 64.97 0 3834319..3835026 - 235 121606493 - Pnap_3605 - CRP/FNR family transcriptional regulator 3575 62.96 0 3835164..3836351 + 395 121606494 - Pnap_3606 - extracellular ligand-binding receptor 3576 64.92 0 3836500..3838446 + 648 121606495 - Pnap_3607 - AMP-dependent synthetase and ligase 3577 60.05 0 3838457..3839242 + 261 121606496 - Pnap_3608 - ABC transporter related 3578 62.15 0 3839380..3840309 + 309 121606497 - Pnap_3609 - inner-membrane translocator 3579 62.86 0 3840336..3841412 + 358 121606498 - Pnap_3610 - inner-membrane translocator 3580 65.84 0 3841496..3842824 + 442 121606499 - Pnap_3611 - hypothetical protein 3581 61.98 0 3842920..3843729 + 269 121606500 - Pnap_3612 - ABC transporter related 3582 67.87 0 3843815..3845065 + 416 121606501 - Pnap_3613 - putative phenylacetate-CoA ligase 3583 65.96 0 3845161..3846150 + 329 121606502 - Pnap_3614 - hypothetical protein 3584 61.62 0 3846462..3846758 - 98 121606503 - Pnap_3615 - hypothetical protein 3585 70.65 +1 3846894..3847646 + 250 121606504 - Pnap_3616 - hypothetical protein 3586 66.95 0 3847744..3850212 + 822 121606505 - Pnap_3617 - salicylyl-CoA 5-hydroxylase 3587 67.51 0 3850269..3850745 + 158 121606506 - Pnap_3618 - MarR family transcriptional regulator 3588 66.08 0 3850742..3851596 + 284 121606507 - Pnap_3619 - enoyl-CoA hydratase 3589 68.78 +1 3851624..3852805 + 393 121606508 - Pnap_3620 - acyl-CoA dehydrogenase domain-containing protein 3590 67.71 0 3852802..3854430 + 542 121606509 - Pnap_3621 - AMP-dependent synthetase and ligase 3591 60.09 0 3854427..3854867 + 146 121606510 - Pnap_3622 - thioesterase superfamily protein 3592 66.16 0 3854864..3855259 + 131 121606511 - Pnap_3623 - endoribonuclease L-PSP 3593 64.57 0 3855560..3855940 - 126 121606512 - Pnap_3624 - hypothetical protein 3594 56.96 -1 3856726..3857034 + 102 121606513 - Pnap_3625 - hypothetical protein 3595 59.31 0 3857378..3858097 + 239 121606514 - Pnap_3626 - CRP/FNR family transcriptional regulator 3596 61.38 0 3858167..3858904 + 245 121606515 - Pnap_3627 - CRP/FNR family transcriptional regulator 3597 60.64 0 3858924..3859802 - 292 121606516 - Pnap_3628 - two component LuxR family transcriptional regulator 3598 60.44 0 3860408..3861082 - 224 121606517 - Pnap_3629 - two component Fis family transcriptional regulator 3599 64.71 0 3861164..3863461 - 765 121606518 - Pnap_3630 - integral membrane sensor signal transduction histidine kinase 3600 64.24 0 3863458..3864117 - 219 121606519 - Pnap_3631 - putative proline rich signal peptide protein 3601 66.96 0 3864077..3865429 - 450 121606520 - Pnap_3632 - sun protein 3602 63.62 0 3865706..3866197 + 163 121606521 - Pnap_3633 - transposase 3603 60.61 0 3866305..3866535 + 76 121606522 - Pnap_3634 - transposase 3604 69.93 +1 3866618..3867076 + 152 121606523 - Pnap_3635 - hypothetical protein 3605 67.51 0 3867096..3867572 + 158 121606524 - Pnap_3636 - putative transposase of insertion sequence ISRm10-1 3606 69.12 +1 3867580..3868599 - 339 121606525 - Pnap_3637 - peptidase M48, Ste24p 3607 60.94 0 3868639..3869232 - 197 121606526 - Pnap_3638 - LemA family protein 3608 61.23 0 3869514..3873728 - 1404 121606527 - Pnap_3639 - DNA-directed RNA polymerase subunit beta' 3609 59.88 0 3873748..3877860 - 1370 121606528 - Pnap_3640 - DNA-directed RNA polymerase, beta subunit 3610 55.82 -1 3878189..3878566 - 125 121606529 - Pnap_3641 - ribosomal protein L7/L12 3611 57.25 -1 3878653..3879204 - 183 121606530 - Pnap_3642 - ribosomal protein L10 3612 58.62 0 3879473..3880168 - 231 121606531 rplA Pnap_3643 - 50S ribosomal protein L1 3613 53.79 -1 3880165..3880599 - 144 121606532 - Pnap_3644 - ribosomal protein L11 3614 51.26 -2 3880776..3881372 - 198 121606533 - Pnap_3645 - NusG antitermination factor 3615 50.78 -2 3881372..3881755 - 127 121606534 secE Pnap_3646 - preprotein translocase subunit SecE 3616 62.47 0 3881983..3883173 - 396 121606535 - Pnap_3647 - elongation factor Tu 3617 64.91 0 3883841..3884578 - 245 121606536 - Pnap_3648 - uracil-DNA glycosylase 3618 63.38 0 3884593..3885384 - 263 121606537 - Pnap_3649 - indole-3-glycerol-phosphate synthase 3619 63.95 0 3885440..3886543 - 367 121606538 - Pnap_3650 - anthranilate phosphoribosyltransferase 3620 68.76 +1 3886536..3887585 - 349 121606539 - Pnap_3651 - threonine aldolase 3621 63.76 0 3887643..3888227 - 194 121606540 - Pnap_3652 - anthranilate synthase component II 3622 63.17 0 3888231..3888545 - 104 121606541 - Pnap_3653 - chorismate mutase 3623 63.60 0 3888549..3890048 - 499 121606542 - Pnap_3654 - anthranilate synthase component I 3624 60.03 0 3890486..3891073 + 195 121606543 - Pnap_3655 - putative lipoprotein transmembrane 3625 63.40 0 3891106..3891810 - 234 121606544 - Pnap_3656 - phosphoglycolate phosphatase 3626 68.60 +1 3891980..3892651 - 223 121606545 - Pnap_3657 - ketopantoate reductase ApbA/PanE 3627 63.15 0 3892712..3893251 - 179 121606546 - Pnap_3658 - cytochrome B561 3628 53.88 -1 3893288..3893545 - 85 121606547 - Pnap_3659 - hypothetical protein 3629 63.78 0 3893635..3894327 - 230 121606548 - Pnap_3660 - ribulose-phosphate 3-epimerase 3630 63.17 0 3894409..3894837 + 142 121606549 apaG Pnap_3661 - ApaG 3631 65.75 0 3894860..3896824 + 654 121606550 - Pnap_3662 - putative site-specific recombinase transmembrane protein 3632 70.08 +1 3897027..3898286 + 419 121606551 - Pnap_3663 - sodium/hydrogen exchanger 3633 64.49 0 3898276..3899421 + 381 121606552 - Pnap_3664 - carboxylate-amine ligase 3634 69.97 +1 3899467..3900465 + 332 121606553 - Pnap_3665 - thiamine-monophosphate kinase 3635 68.46 +1 3900475..3901032 + 185 121606554 - Pnap_3666 - phosphatidylglycerophosphatase A 3636 67.05 0 3901029..3901550 + 173 121606555 - Pnap_3667 - CinA domain-containing protein 3637 65.59 0 3901561..3901839 - 92 121606556 - Pnap_3668 - hypothetical protein 3638 64.19 0 3901845..3902288 - 147 121606557 - Pnap_3669 - OsmC family protein 3639 67.05 0 3902406..3903191 - 261 121606558 - Pnap_3670 - spermidine synthase-like protein 3640 68.84 +1 3903243..3904025 - 260 121606559 - Pnap_3671 - CRP/FNR family transcriptional regulator 3641 68.21 +1 3904068..3904457 - 129 121606560 - Pnap_3672 - hypothetical protein 3642 64.17 0 3905089..3906210 + 373 121606561 - Pnap_3673 - hypothetical protein 3643 74.67 +2 3906234..3906908 + 224 121606562 - Pnap_3674 - hypothetical protein 3644 68.52 +1 3907016..3907879 + 287 121606563 - Pnap_3675 - methyltransferase type 11 3645 71.46 +1 3908012..3910912 - 966 121606564 - Pnap_3676 - putative chaperone protein, HscA/DnaK 3646 70.79 +1 3910977..3912890 - 637 121606565 - Pnap_3677 - putative molecular chaperone protein HspA/DnaK 3647 68.61 +1 3912887..3913453 - 188 121606566 - Pnap_3678 - hypothetical protein 3648 61.03 0 3914029..3915252 + 407 121606567 - Pnap_3679 - extracellular ligand-binding receptor 3649 62.91 0 3915375..3917612 - 745 121606568 - Pnap_3680 - isocitrate dehydrogenase, NADP-dependent 3650 58.95 0 3917942..3918226 + 94 121606569 - Pnap_3681 - SpoVT/AbrB domain-containing protein 3651 63.70 0 3918230..3918634 + 134 121606570 - Pnap_3682 - PilT domain-containing protein 3652 66.21 0 3918792..3920984 - 730 121606571 - Pnap_3683 - malate synthase G 3653 65.20 0 3921089..3921838 - 249 121606572 - Pnap_3684 - haloacid dehalogenase, type II 3654 69.93 +1 3922034..3924268 + 744 121606573 - Pnap_3685 - pyruvate carboxyltransferase 3655 64.08 0 3924324..3925019 + 231 121606574 - Pnap_3686 - two component transcriptional regulator 3656 66.37 0 3925016..3926383 + 455 121606575 - Pnap_3687 - integral membrane sensor signal transduction histidine kinase 3657 64.85 0 3926429..3927475 - 348 121606576 - Pnap_3688 - aldo/keto reductase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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