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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3491 62.84 0 3737294..3738496 - 400 121606410 - Pnap_3521 - extracellular ligand-binding receptor 3492 59.14 0 3738758..3740191 + 477 121606411 - Pnap_3522 - integral membrane sensor signal transduction histidine kinase 3493 59.26 0 3740157..3740831 + 224 121606412 - Pnap_3523 - two component LuxR family transcriptional regulator 3494 64.88 0 3741055..3744348 + 1097 121606413 - Pnap_3524 - methylmalonyl-CoA mutase, large subunit 3495 59.26 0 3744469..3744630 - 53 121606414 - Pnap_3525 - hypothetical protein 3496 63.08 0 3744722..3745837 - 371 121606415 - Pnap_3526 - hypothetical protein 3497 62.66 0 3746028..3746801 + 257 121606416 - Pnap_3527 - ABC transporter related 3498 65.25 0 3746804..3747508 + 234 121606417 - Pnap_3528 - ABC transporter related 3499 62.98 0 3747586..3748779 + 397 121606418 - Pnap_3529 - extracellular ligand-binding receptor 3500 64.29 0 3748864..3749748 + 294 121606419 - Pnap_3530 - inner-membrane translocator 3501 63.25 0 3749753..3750775 + 340 121606420 - Pnap_3531 - inner-membrane translocator 3502 63.25 0 3751272..3752324 + 350 121606421 - Pnap_3532 - porin 3503 64.71 0 3752502..3753269 - 255 121606422 - Pnap_3533 - ABC transporter related 3504 65.20 0 3753282..3754169 - 295 121606423 - Pnap_3534 - ABC transporter related 3505 68.66 +1 3754181..3755083 - 300 121606424 - Pnap_3535 - binding-protein-dependent transport systems inner membrane component 3506 64.89 0 3755080..3756147 - 355 121606425 - Pnap_3536 - binding-protein-dependent transport systems inner membrane component 3507 63.67 0 3756188..3757858 - 556 121606426 - Pnap_3537 - extracellular solute-binding protein 3508 63.67 0 3757843..3759045 - 400 121606427 - Pnap_3538 - mandelate racemase/muconate lactonizing protein 3509 63.98 0 3759311..3760093 + 260 121606428 - Pnap_3539 - regulatory protein GntR, HTH 3510 51.57 -2 3760209..3760844 - 211 121606429 - Pnap_3540 - hypothetical protein 3511 52.22 -1 3760847..3762127 - 426 121606430 - Pnap_3541 - ATPase-like protein 3512 65.46 0 3762205..3763608 - 467 121606431 - Pnap_3542 - ATP-dependent RNA helicase DbpA 3513 68.00 0 3763736..3764557 + 273 121606432 - Pnap_3543 - phosphoesterase, PA-phosphatase related 3514 66.37 0 3764633..3766000 + 455 121606433 - Pnap_3544 - pyridine nucleotide-disulphide oxidoreductase dimerisation region 3515 66.60 0 3766053..3767573 + 506 121606434 - Pnap_3545 - AMP nucleosidase 3516 72.32 +1 3768484..3769917 + 477 121606435 - Pnap_3547 - RND efflux system outer membrane lipoprotein 3517 69.75 +1 3769971..3771299 + 442 121606436 - Pnap_3548 - RND family efflux transporter MFP subunit 3518 69.53 +1 3771296..3772063 + 255 121606437 - Pnap_3549 - ABC transporter related 3519 67.91 0 3772063..3773271 + 402 121606438 - Pnap_3550 - hypothetical protein 3520 54.36 -1 3773362..3773556 - 64 121606439 - Pnap_3551 - hypothetical protein 3521 63.88 0 3773602..3774246 - 214 121606440 - Pnap_3552 - hemolysin III family channel protein 3522 59.48 0 3774351..3774656 + 101 121606441 - Pnap_3553 - hypothetical protein 3523 56.90 -1 3774687..3774983 + 98 121606442 - Pnap_3554 - hypothetical protein 3524 48.85 -2 3775123..3775515 + 130 121606443 - Pnap_3555 - hypothetical protein 3525 58.43 0 3775783..3777276 + 497 121606444 - Pnap_3556 - transposase, IS4 family protein 3526 65.77 0 3777739..3778959 - 406 121606445 - Pnap_3557 - 6-phosphofructokinase 3527 66.15 0 3779080..3780447 - 455 121606446 - Pnap_3558 - filamentation induced by cAMP protein Fic 3528 63.78 0 3780600..3781673 - 357 121606447 - Pnap_3559 - TRAP-type uncharacterized transport system protein, periplasmic component 3529 66.67 0 3781675..3782457 - 260 121606448 - Pnap_3560 - zinc finger, RanBP2-type 3530 65.97 0 3782983..3783696 + 237 121606449 - Pnap_3561 - hypothetical protein 3531 65.51 0 3783720..3784322 + 200 121606450 - Pnap_3562 - D-alanyl-D-alanine dipeptidase 3532 59.70 0 3784446..3785048 + 200 121606451 - Pnap_3563 - hypothetical protein 3533 58.97 0 3785185..3785418 + 77 121606452 - Pnap_3564 - hypothetical protein 3534 72.25 +1 3785458..3788070 + 870 121606453 - Pnap_3565 - ATPase, P-type (transporting), HAD superfamily, subfamily IC 3535 64.89 0 3788204..3789949 + 581 121606454 - Pnap_3566 - poly-beta-hydroxybutyrate polymerase domain-containing protein 3536 67.79 0 3790004..3790807 + 267 121606455 - Pnap_3567 - short-chain dehydrogenase/reductase SDR 3537 66.80 0 3790776..3792278 + 500 121606456 - Pnap_3568 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3538 70.39 +1 3792275..3793510 + 411 121606457 - Pnap_3569 - acetate kinase 3539 67.39 0 3793633..3794739 - 368 121606458 - Pnap_3570 - MscS mechanosensitive ion channel 3540 66.33 0 3794748..3795953 - 401 121606459 purT Pnap_3571 - phosphoribosylglycinamide formyltransferase 2 3541 67.34 0 3796152..3796742 + 196 121606460 - Pnap_3572 - hypothetical protein 3542 65.71 0 3796823..3797764 + 313 121606461 - Pnap_3573 - ABC transporter related 3543 64.80 0 3797761..3798615 + 284 121606462 - Pnap_3574 - ABC transporter 3544 64.81 0 3798759..3799784 + 341 121606463 - Pnap_3575 - CheB methylesterase 3545 69.64 +1 3799830..3800501 - 223 121606464 - Pnap_3576 - hypothetical protein 3546 62.39 0 3800883..3802121 + 412 121606465 - Pnap_3577 - extracellular ligand-binding receptor 3547 61.66 0 3802311..3802889 - 192 121606466 - Pnap_3578 - YceI family protein 3548 63.11 0 3802933..3803523 - 196 121606467 - Pnap_3579 - YceI family protein 3549 67.24 0 3803569..3804087 - 172 121606468 - Pnap_3580 - cytochrome B561 3550 64.81 0 3804273..3805244 - 323 121606469 - Pnap_3581 - hypothetical protein 3551 64.67 0 3805325..3806374 + 349 121606470 - Pnap_3582 - serine/threonine protein kinase 3552 65.80 0 3806480..3807514 + 344 121606471 - Pnap_3583 - ErfK/YbiS/YcfS/YnhG family protein 3553 68.95 +1 3807558..3808082 + 174 121606472 - Pnap_3584 - peptidase M23B 3554 70.59 +1 3808113..3808673 - 186 121606473 - Pnap_3585 - hypothetical protein 3555 68.12 0 3808670..3810247 - 525 121606474 - Pnap_3586 - peptidoglycan binding domain-containing protein 3556 62.38 0 3810387..3812276 - 629 121606475 - Pnap_3587 - heat shock protein 90 3557 63.12 0 3812565..3813212 + 215 121606476 - Pnap_3588 - hypothetical protein 3558 62.59 0 3813401..3814063 + 220 121606477 - Pnap_3589 - hypothetical protein 3559 64.51 0 3814083..3814730 + 215 121606478 - Pnap_3590 - hypothetical protein 3560 66.25 0 3814731..3815213 + 160 121606479 - Pnap_3591 - hypothetical protein 3561 66.06 0 3815210..3816037 + 275 121606480 - Pnap_3592 - hypothetical protein 3562 71.93 +1 3816034..3818121 + 695 121606481 - Pnap_3593 - hypothetical protein 3563 71.70 +1 3818185..3819534 - 449 121606482 - Pnap_3594 - PGAP1 family protein 3564 69.06 +1 3819672..3820508 - 278 121606483 - Pnap_3595 - pseudouridine synthase 3565 70.25 +1 3820620..3821177 + 185 121606484 - Pnap_3596 - putative transmembrane protein 3566 67.91 0 3821202..3821846 - 214 121606485 - Pnap_3597 - two component LuxR family transcriptional regulator 3567 72.42 +1 3821843..3823162 - 439 121606486 - Pnap_3598 - integral membrane sensor signal transduction histidine kinase 3568 67.48 0 3823415..3825883 + 822 121606487 - Pnap_3599 - TonB-dependent receptor 3569 70.20 +1 3825987..3826694 - 235 121606488 - Pnap_3600 - two component transcriptional regulator 3570 70.70 +1 3826704..3829403 - 899 121606489 - Pnap_3601 - osmosensitive K+ channel signal transduction histidine kinase 3571 69.71 +1 3829422..3830012 - 196 121606490 - Pnap_3602 - potassium-transporting ATPase, C subunit 3572 66.19 0 3830032..3832110 - 692 121606491 - Pnap_3603 - K+-transporting ATPase, B subunit 3573 66.00 0 3832130..3833929 - 599 121606492 - Pnap_3604 - potassium-transporting ATPase, A subunit 3574 64.97 0 3834319..3835026 - 235 121606493 - Pnap_3605 - CRP/FNR family transcriptional regulator 3575 62.96 0 3835164..3836351 + 395 121606494 - Pnap_3606 - extracellular ligand-binding receptor 3576 64.92 0 3836500..3838446 + 648 121606495 - Pnap_3607 - AMP-dependent synthetase and ligase 3577 60.05 0 3838457..3839242 + 261 121606496 - Pnap_3608 - ABC transporter related 3578 62.15 0 3839380..3840309 + 309 121606497 - Pnap_3609 - inner-membrane translocator 3579 62.86 0 3840336..3841412 + 358 121606498 - Pnap_3610 - inner-membrane translocator 3580 65.84 0 3841496..3842824 + 442 121606499 - Pnap_3611 - hypothetical protein 3581 61.98 0 3842920..3843729 + 269 121606500 - Pnap_3612 - ABC transporter related 3582 67.87 0 3843815..3845065 + 416 121606501 - Pnap_3613 - putative phenylacetate-CoA ligase 3583 65.96 0 3845161..3846150 + 329 121606502 - Pnap_3614 - hypothetical protein 3584 61.62 0 3846462..3846758 - 98 121606503 - Pnap_3615 - hypothetical protein 3585 70.65 +1 3846894..3847646 + 250 121606504 - Pnap_3616 - hypothetical protein 3586 66.95 0 3847744..3850212 + 822 121606505 - Pnap_3617 - salicylyl-CoA 5-hydroxylase 3587 67.51 0 3850269..3850745 + 158 121606506 - Pnap_3618 - MarR family transcriptional regulator 3588 66.08 0 3850742..3851596 + 284 121606507 - Pnap_3619 - enoyl-CoA hydratase 3589 68.78 +1 3851624..3852805 + 393 121606508 - Pnap_3620 - acyl-CoA dehydrogenase domain-containing protein 3590 67.71 0 3852802..3854430 + 542 121606509 - Pnap_3621 - AMP-dependent synthetase and ligase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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