version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3454 43.02 -2 3697865..3698845 - 326 121606373 - Pnap_3484 - NAD-dependent epimerase/dehydratase 3455 40.94 -2 3698864..3699796 - 310 121606374 - Pnap_3485 - glycosyl transferase family protein 3456 39.75 -2 3699798..3701060 - 420 121606375 - Pnap_3486 - hypothetical protein 3457 51.45 -2 3701180..3702454 - 424 121606376 - Pnap_3487 - polysaccharide biosynthesis protein 3458 56.78 -1 3702465..3703010 - 181 121606377 - Pnap_3488 - dTDP-4-dehydrorhamnose 3,5-epimerase 3459 61.37 0 3703007..3703894 - 295 121606378 - Pnap_3489 - glucose-1-phosphate thymidylyltransferase 3460 65.32 0 3703919..3704809 - 296 121606379 - Pnap_3490 - dTDP-4-dehydrorhamnose reductase 3461 64.13 0 3704806..3705870 - 354 121606380 - Pnap_3491 - dTDP-glucose 4,6-dehydratase 3462 61.03 0 3705956..3706807 - 283 121606381 - Pnap_3492 - lipopolysaccharide biosynthesis 3463 52.92 -1 3707218..3707559 + 113 121606382 - Pnap_3493 - histone family protein nucleoid-structuring protein H-NS 3464 61.35 0 3707607..3709601 - 664 121606383 - Pnap_3494 - short chain dehydrogenase 3465 63.42 0 3709834..3710418 + 194 121606384 - Pnap_3495 - poly(hydroxyalkanoate) granule-associated protein 3466 63.10 0 3710603..3711274 + 223 121606385 - Pnap_3496 - TetR family transcriptional regulator 3467 61.96 0 3711299..3712105 + 268 121606386 - Pnap_3497 - hypothetical protein 3468 64.15 0 3712198..3713748 - 516 121606387 - Pnap_3498 - glycosyl transferase family protein 3469 71.15 +1 3713851..3714810 - 319 121606388 - Pnap_3499 - hypothetical protein 3470 64.58 0 3714807..3715718 - 303 121606389 - Pnap_3500 - UbiA prenyltransferase 3471 66.13 0 3715798..3716922 + 374 121606390 - Pnap_3501 - putative zinc protease protein 3472 64.11 0 3716927..3719350 - 807 121606391 - Pnap_3502 - multi-sensor signal transduction histidine kinase 3473 60.96 0 3719646..3719978 + 110 121606392 - Pnap_3503 - putative polyhydroxyalkanoic acid system protein 3474 68.91 +1 3719998..3720933 + 311 121606393 - Pnap_3504 - LysR family transcriptional regulator 3475 69.74 +1 3720967..3722202 + 411 121606394 - Pnap_3505 - Formyl-CoA transferase 3476 65.82 0 3722199..3723146 + 315 121606395 - Pnap_3506 - pyruvate carboxyltransferase 3477 63.36 0 3723143..3723535 + 130 121606396 - Pnap_3507 - glyoxalase/bleomycin resistance protein/dioxygenase 3478 66.97 0 3723566..3724540 + 324 121606397 - Pnap_3508 - hypothetical protein 3479 60.78 0 3724629..3724883 - 84 121606398 - Pnap_3509 - acyl-CoA-binding protein 3480 68.39 +1 3725024..3726592 + 522 121606399 - Pnap_3510 - hypothetical protein 3481 65.89 0 3726664..3727431 - 255 121606400 - Pnap_3511 - pantothenate kinase 3482 64.57 0 3727528..3728196 - 222 121606401 - Pnap_3512 - regulatory protein, LuxR 3483 62.13 0 3728283..3729560 + 425 121606402 - Pnap_3513 - integral membrane sensor signal transduction histidine kinase 3484 64.63 0 3729570..3730598 + 342 121606403 - Pnap_3514 - response regulator receiver protein 3485 65.38 0 3730601..3731848 - 415 121606404 - Pnap_3515 - hypothetical protein 3486 65.31 0 3731994..3732434 - 146 121606405 - Pnap_3516 - rhodanese domain-containing protein 3487 63.49 0 3732622..3733533 + 303 121606406 - Pnap_3517 - hypothetical protein 3488 65.70 0 3733659..3734381 - 240 121606407 - Pnap_3518 - ABC transporter related 3489 64.44 0 3734397..3736328 - 643 121606408 - Pnap_3519 - ABC transporter related 3490 61.76 0 3736332..3737207 - 291 121606409 - Pnap_3520 - inner-membrane translocator 3491 62.84 0 3737294..3738496 - 400 121606410 - Pnap_3521 - extracellular ligand-binding receptor 3492 59.14 0 3738758..3740191 + 477 121606411 - Pnap_3522 - integral membrane sensor signal transduction histidine kinase 3493 59.26 0 3740157..3740831 + 224 121606412 - Pnap_3523 - two component LuxR family transcriptional regulator 3494 64.88 0 3741055..3744348 + 1097 121606413 - Pnap_3524 - methylmalonyl-CoA mutase, large subunit 3495 59.26 0 3744469..3744630 - 53 121606414 - Pnap_3525 - hypothetical protein 3496 63.08 0 3744722..3745837 - 371 121606415 - Pnap_3526 - hypothetical protein 3497 62.66 0 3746028..3746801 + 257 121606416 - Pnap_3527 - ABC transporter related 3498 65.25 0 3746804..3747508 + 234 121606417 - Pnap_3528 - ABC transporter related 3499 62.98 0 3747586..3748779 + 397 121606418 - Pnap_3529 - extracellular ligand-binding receptor 3500 64.29 0 3748864..3749748 + 294 121606419 - Pnap_3530 - inner-membrane translocator 3501 63.25 0 3749753..3750775 + 340 121606420 - Pnap_3531 - inner-membrane translocator 3502 63.25 0 3751272..3752324 + 350 121606421 - Pnap_3532 - porin 3503 64.71 0 3752502..3753269 - 255 121606422 - Pnap_3533 - ABC transporter related 3504 65.20 0 3753282..3754169 - 295 121606423 - Pnap_3534 - ABC transporter related 3505 68.66 +1 3754181..3755083 - 300 121606424 - Pnap_3535 - binding-protein-dependent transport systems inner membrane component 3506 64.89 0 3755080..3756147 - 355 121606425 - Pnap_3536 - binding-protein-dependent transport systems inner membrane component 3507 63.67 0 3756188..3757858 - 556 121606426 - Pnap_3537 - extracellular solute-binding protein 3508 63.67 0 3757843..3759045 - 400 121606427 - Pnap_3538 - mandelate racemase/muconate lactonizing protein 3509 63.98 0 3759311..3760093 + 260 121606428 - Pnap_3539 - regulatory protein GntR, HTH 3510 51.57 -2 3760209..3760844 - 211 121606429 - Pnap_3540 - hypothetical protein 3511 52.22 -1 3760847..3762127 - 426 121606430 - Pnap_3541 - ATPase-like protein 3512 65.46 0 3762205..3763608 - 467 121606431 - Pnap_3542 - ATP-dependent RNA helicase DbpA 3513 68.00 0 3763736..3764557 + 273 121606432 - Pnap_3543 - phosphoesterase, PA-phosphatase related 3514 66.37 0 3764633..3766000 + 455 121606433 - Pnap_3544 - pyridine nucleotide-disulphide oxidoreductase dimerisation region 3515 66.60 0 3766053..3767573 + 506 121606434 - Pnap_3545 - AMP nucleosidase 3516 72.32 +1 3768484..3769917 + 477 121606435 - Pnap_3547 - RND efflux system outer membrane lipoprotein 3517 69.75 +1 3769971..3771299 + 442 121606436 - Pnap_3548 - RND family efflux transporter MFP subunit 3518 69.53 +1 3771296..3772063 + 255 121606437 - Pnap_3549 - ABC transporter related 3519 67.91 0 3772063..3773271 + 402 121606438 - Pnap_3550 - hypothetical protein 3520 54.36 -1 3773362..3773556 - 64 121606439 - Pnap_3551 - hypothetical protein 3521 63.88 0 3773602..3774246 - 214 121606440 - Pnap_3552 - hemolysin III family channel protein 3522 59.48 0 3774351..3774656 + 101 121606441 - Pnap_3553 - hypothetical protein 3523 56.90 -1 3774687..3774983 + 98 121606442 - Pnap_3554 - hypothetical protein 3524 48.85 -2 3775123..3775515 + 130 121606443 - Pnap_3555 - hypothetical protein 3525 58.43 0 3775783..3777276 + 497 121606444 - Pnap_3556 - transposase, IS4 family protein 3526 65.77 0 3777739..3778959 - 406 121606445 - Pnap_3557 - 6-phosphofructokinase 3527 66.15 0 3779080..3780447 - 455 121606446 - Pnap_3558 - filamentation induced by cAMP protein Fic 3528 63.78 0 3780600..3781673 - 357 121606447 - Pnap_3559 - TRAP-type uncharacterized transport system protein, periplasmic component 3529 66.67 0 3781675..3782457 - 260 121606448 - Pnap_3560 - zinc finger, RanBP2-type 3530 65.97 0 3782983..3783696 + 237 121606449 - Pnap_3561 - hypothetical protein 3531 65.51 0 3783720..3784322 + 200 121606450 - Pnap_3562 - D-alanyl-D-alanine dipeptidase 3532 59.70 0 3784446..3785048 + 200 121606451 - Pnap_3563 - hypothetical protein 3533 58.97 0 3785185..3785418 + 77 121606452 - Pnap_3564 - hypothetical protein 3534 72.25 +1 3785458..3788070 + 870 121606453 - Pnap_3565 - ATPase, P-type (transporting), HAD superfamily, subfamily IC 3535 64.89 0 3788204..3789949 + 581 121606454 - Pnap_3566 - poly-beta-hydroxybutyrate polymerase domain-containing protein 3536 67.79 0 3790004..3790807 + 267 121606455 - Pnap_3567 - short-chain dehydrogenase/reductase SDR 3537 66.80 0 3790776..3792278 + 500 121606456 - Pnap_3568 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3538 70.39 +1 3792275..3793510 + 411 121606457 - Pnap_3569 - acetate kinase 3539 67.39 0 3793633..3794739 - 368 121606458 - Pnap_3570 - MscS mechanosensitive ion channel 3540 66.33 0 3794748..3795953 - 401 121606459 purT Pnap_3571 - phosphoribosylglycinamide formyltransferase 2 3541 67.34 0 3796152..3796742 + 196 121606460 - Pnap_3572 - hypothetical protein 3542 65.71 0 3796823..3797764 + 313 121606461 - Pnap_3573 - ABC transporter related 3543 64.80 0 3797761..3798615 + 284 121606462 - Pnap_3574 - ABC transporter 3544 64.81 0 3798759..3799784 + 341 121606463 - Pnap_3575 - CheB methylesterase 3545 69.64 +1 3799830..3800501 - 223 121606464 - Pnap_3576 - hypothetical protein 3546 62.39 0 3800883..3802121 + 412 121606465 - Pnap_3577 - extracellular ligand-binding receptor 3547 61.66 0 3802311..3802889 - 192 121606466 - Pnap_3578 - YceI family protein 3548 63.11 0 3802933..3803523 - 196 121606467 - Pnap_3579 - YceI family protein 3549 67.24 0 3803569..3804087 - 172 121606468 - Pnap_3580 - cytochrome B561 3550 64.81 0 3804273..3805244 - 323 121606469 - Pnap_3581 - hypothetical protein 3551 64.67 0 3805325..3806374 + 349 121606470 - Pnap_3582 - serine/threonine protein kinase 3552 65.80 0 3806480..3807514 + 344 121606471 - Pnap_3583 - ErfK/YbiS/YcfS/YnhG family protein 3553 68.95 +1 3807558..3808082 + 174 121606472 - Pnap_3584 - peptidase M23B 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0