version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 301 64.14 0 305357..306346 + 329 121603220 - Pnap_0305 - hypothetical protein 302 67.56 0 306390..307733 + 447 121603221 - Pnap_0306 - hypothetical protein 303 65.85 0 307738..308469 - 243 121603222 - Pnap_0307 - helix-turn-helix domain-containing protein 304 68.67 +1 308593..309492 + 299 121603223 - Pnap_0308 - hypothetical protein 305 64.54 0 309489..311465 + 658 121603224 - Pnap_0309 - phospholipid/glycerol acyltransferase 306 68.41 +1 311612..312070 + 152 121603225 - Pnap_0310 - hypothetical protein 307 68.86 +1 312085..312903 + 272 121603226 - Pnap_0311 - hypothetical protein 308 61.49 0 312927..314201 + 424 121603227 - Pnap_0312 - hypothetical protein 309 63.56 0 314236..314685 + 149 121603228 - Pnap_0313 - YiaAB two helix domain-containing protein 310 68.13 0 314705..315595 - 296 121603229 - Pnap_0314 - hypothetical protein 311 65.34 0 315758..316816 + 352 121603230 - Pnap_0315 - hypothetical protein 312 67.19 0 316942..318291 + 449 121603231 - Pnap_0316 - hypothetical protein 313 66.22 0 318385..320175 - 596 121603232 - Pnap_0317 - glycosyltransferase 314 61.15 0 320195..320683 - 162 121603233 - Pnap_0318 - GtrA family protein 315 68.68 +1 320683..321924 - 413 121603234 - Pnap_0319 - glycosyl transferase family protein 316 63.83 0 321928..323091 - 387 121603235 - Pnap_0320 - queuine tRNA-ribosyltransferase 317 65.06 0 323114..324172 - 352 121603236 - Pnap_0321 - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase 318 67.04 0 324192..326339 + 715 121603237 - Pnap_0322 - ATP-dependent DNA helicase RecG 319 51.24 -2 326359..326760 - 133 121603238 - Pnap_0323 - hypothetical protein 320 65.20 0 326904..327860 + 318 121603239 - Pnap_0324 - LysR family transcriptional regulator 321 63.24 0 327973..328497 + 174 121603240 - Pnap_0325 - Ferritin, Dps family protein 322 63.10 0 328532..329401 + 289 121603241 - Pnap_0326 - 4-hydroxybenzoate polyprenyl transferase 323 68.45 +1 329984..330823 - 279 121603242 - Pnap_0327 - pyrroline-5-carboxylate reductase 324 68.34 +1 330919..332412 - 497 121603243 - Pnap_0328 - glycerol kinase 325 65.03 0 332614..334200 + 528 121603244 - Pnap_0329 - FAD dependent oxidoreductase 326 55.56 -1 334415..334783 + 122 121603245 - Pnap_0330 - ribosomal protein L14 327 52.96 -1 334796..335116 + 106 121603246 - Pnap_0331 - ribosomal protein L24 328 56.11 -1 335119..335658 + 179 121603247 rplE Pnap_0332 - 50S ribosomal protein L5 329 55.56 -1 335667..335972 + 101 121603248 - Pnap_0333 - ribosomal protein S14 330 55.56 -1 335991..336386 + 131 121603249 - Pnap_0334 - ribosomal protein S8 331 53.93 -1 336411..336944 + 177 121603250 - Pnap_0335 - ribosomal protein L6 332 55.46 -1 336956..337321 + 121 121603251 - Pnap_0336 - ribosomal protein L18P/L5E 333 56.07 -1 337339..337857 + 172 121603252 rpsE Pnap_0337 - 30S ribosomal protein S5 334 55.19 -1 337871..338053 + 60 121603253 - Pnap_0338 - ribosomal protein L30 335 57.41 -1 338067..338498 + 143 121603254 - Pnap_0339 - ribosomal protein L15 336 50.08 -2 338518..339825 + 435 121603255 secY Pnap_0340 - preprotein translocase subunit SecY 337 51.75 -2 339911..340024 + 37 121603256 - Pnap_0341 - ribosomal protein L36 338 54.64 -1 340050..340415 + 121 121603257 rpsM Pnap_0342 - 30S ribosomal protein S13 339 55.80 -1 340429..340833 + 134 121603258 - Pnap_0343 - 30S ribosomal protein S11 340 54.49 -1 340964..341587 + 207 121603259 rpsD Pnap_0344 - 30S ribosomal protein S4 341 51.96 -2 341683..342675 + 330 121603260 - Pnap_0345 - DNA-directed RNA polymerase subunit alpha 342 55.22 -1 342759..343160 + 133 121603261 - Pnap_0346 - ribosomal protein L17 343 69.93 +1 343429..343887 + 152 121603262 - Pnap_0347 - hypothetical protein 344 67.51 0 343907..344383 + 158 121603263 - Pnap_0348 - putative transposase of insertion sequence ISRm10-1 345 59.68 0 344375..345706 - 443 121603264 - Pnap_0349 - sodium/hydrogen exchanger 346 62.60 0 345932..347137 - 401 121603265 - Pnap_0350 - phospholipase A1 347 61.61 0 347159..347731 - 190 121603266 - Pnap_0351 - hypothetical protein 348 63.43 0 347808..349937 - 709 121603267 - Pnap_0352 - UvrD/REP helicase 349 64.88 0 350042..351274 - 410 121603268 - Pnap_0353 - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase 350 66.61 0 351271..353049 - 592 121603269 - Pnap_0354 - putative bifunctional OHCU decarboxylase/allantoate amidohydrolase 351 66.14 0 353046..353999 - 317 121603270 - Pnap_0355 - polysaccharide deacetylase 352 66.67 0 354171..354527 + 118 121603271 - Pnap_0356 - transthyretin 353 63.71 0 354524..355741 + 405 121603272 - Pnap_0357 - hypothetical protein 354 65.87 0 355874..356878 - 334 121603273 - Pnap_0358 - ATPase central domain-containing protein 355 62.69 0 357176..359512 + 778 121603274 - Pnap_0359 - PAS/PAC sensor signal transduction histidine kinase 356 63.40 0 359491..360561 - 356 121603275 - Pnap_0360 - hypothetical protein 357 54.44 -1 360685..361191 + 168 121603276 - Pnap_0361 - hypothetical protein 358 68.59 +1 361263..363392 - 709 121603277 - Pnap_0362 - primosomal protein N' 359 66.22 0 363768..364877 - 369 121603278 - Pnap_0363 - uroporphyrinogen decarboxylase 360 62.57 0 364982..365347 + 121 121603279 - Pnap_0364 - hypothetical protein 361 64.86 0 365438..365770 - 110 121603280 - Pnap_0365 - hypothetical protein 362 64.82 0 365781..366377 - 198 121603281 - Pnap_0366 - hypothetical protein 363 63.46 0 366415..366819 - 134 121603282 - Pnap_0367 - roadblock/LC7 family protein 364 57.11 -1 366906..367313 - 135 121603283 - Pnap_0368 - hypothetical protein 365 63.74 0 367341..368777 - 478 121603284 - Pnap_0369 - ABC transporter related 366 58.51 0 368774..369337 - 187 121603285 - Pnap_0370 - protein of unknown function, ATP binding 367 60.80 0 369366..369740 - 124 121603286 - Pnap_0371 - hypothetical protein 368 65.08 0 369880..371205 - 441 121603287 - Pnap_0372 - methyltransferase type 12 369 52.63 -1 371606..372061 + 151 121603288 - Pnap_0373 - hypothetical protein 370 68.16 0 372171..372905 - 244 121603289 - Pnap_0374 - putative lipoprotein 371 66.02 0 372909..373373 - 154 121603290 - Pnap_0375 - CoA-binding domain-containing protein 372 69.41 +1 373443..375590 - 715 121603291 - Pnap_0376 - cytochrome c biogenesis protein, transmembrane region 373 65.05 0 375774..376268 + 164 121603292 - Pnap_0377 - XRE family transcriptional regulator 374 62.23 0 376278..376976 + 232 121603293 - Pnap_0378 - hypothetical protein 375 66.67 0 377049..377372 - 107 121603294 - Pnap_0379 - hypothetical protein 376 64.91 0 377538..378107 + 189 121603295 - Pnap_0380 - cytochrome B561 377 60.61 0 378109..378603 + 164 121603296 - Pnap_0381 - hypothetical protein 378 58.26 0 378619..378939 + 106 121603297 - Pnap_0382 - hypothetical protein 379 72.46 +1 378995..379996 - 333 121603298 - Pnap_0383 - hypothetical protein 380 35.77 -2 380445..382046 - 533 121603299 - Pnap_0384 - hypothetical protein 381 58.14 0 382417..382674 + 85 121603300 - Pnap_0385 - hypothetical protein 382 61.39 0 382949..383554 + 201 121603301 - Pnap_0386 - helix-turn-helix domain-containing protein 383 65.40 0 383746..385404 + 552 121603302 - Pnap_0387 - radical SAM domain-containing protein 384 60.24 0 385516..385935 + 139 121603303 - Pnap_0388 - hypothetical protein 385 65.99 0 385951..387585 + 544 121603304 - Pnap_0389 - chaperonin GroEL 386 64.49 0 387609..388067 + 152 121603305 - Pnap_0390 - hypothetical protein 387 63.64 0 388119..388547 + 142 121603306 - Pnap_0391 - UspA domain-containing protein 388 67.15 0 388540..390396 - 618 121603307 - Pnap_0392 - ATP-dependent metalloprotease FtsH 389 65.52 0 390553..390900 + 115 121603308 - Pnap_0393 - hypothetical protein 390 66.32 0 390986..391855 + 289 121603309 - Pnap_0394 - creatininase 391 67.26 0 392221..393561 + 446 121603310 - Pnap_0395 - L-sorbosone dehydrogenase 392 65.32 0 393640..394308 - 222 121603311 - Pnap_0396 - phosphoglycerate mutase 393 64.73 0 394345..396612 - 755 121603312 - Pnap_0397 - integral membrane sensor hybrid histidine kinase 394 55.64 -1 396843..397241 - 132 121603313 - Pnap_0398 - response regulator receiver protein 395 59.51 0 397480..398220 - 246 121603314 - Pnap_0399 - hypothetical protein 396 67.74 0 398447..399379 - 310 121603315 - Pnap_0400 - PhzF family phenazine biosynthesis protein 397 67.49 0 399420..400640 - 406 121603316 - Pnap_0401 - GntR family transcriptional regulator 398 69.12 +1 400694..401629 - 311 121603317 - Pnap_0402 - hypothetical protein 399 66.24 0 401856..403277 + 473 121603318 - Pnap_0403 - GntR family transcriptional regulator 400 62.80 0 403967..404509 + 180 121603319 - Pnap_0404 - hypothetical protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0