version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2959 65.37 0 3155152..3155691 - 179 121605878 - Pnap_2987 - OmpA/MotB domain-containing protein 2960 66.01 0 3155733..3156344 + 203 121605879 - Pnap_2988 - ChaC family protein 2961 65.28 0 3156360..3157007 + 215 121605880 - Pnap_2989 - pyridoxamine 5'-phosphate oxidase 2962 66.87 0 3157012..3157515 - 167 121605881 - Pnap_2990 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2963 63.77 0 3157531..3159153 - 540 121605882 - Pnap_2991 - poly(A) polymerase 2964 60.31 0 3159276..3159983 - 235 121605883 - Pnap_2992 - HAD family hydrolase 2965 64.12 0 3159980..3160687 - 235 121605884 - Pnap_2993 - chromosomal replication initiator, DnaA 2966 64.93 0 3160968..3162005 + 345 121605885 - Pnap_2994 - phosphoribosylformylglycinamidine cyclo-ligase 2967 52.28 -1 3162440..3162856 + 138 121605886 - Pnap_2995 - hypothetical protein 2968 59.70 0 3162881..3163354 + 157 121605887 - Pnap_2996 - transposase 2969 63.35 0 3163351..3164013 + 220 121605888 - Pnap_2997 - transposase 2970 53.97 -1 3164670..3165047 + 125 121605889 - Pnap_2998 - hypothetical protein 2971 57.44 0 3165028..3165363 + 111 121605890 - Pnap_2999 - XRE family transcriptional regulator 2972 69.68 +1 3165551..3166744 + 397 121605891 - Pnap_3000 - major facilitator superfamily transporter 2973 65.02 0 3166898..3167506 + 202 121605892 - Pnap_3001 - isochorismatase hydrolase 2974 70.03 +1 3167503..3168513 + 336 121605893 - Pnap_3002 - AraC family transcriptional regulator 2975 65.14 0 3168561..3169412 - 283 121605894 - Pnap_3003 - hypothetical protein 2976 65.77 0 3169507..3171072 - 521 121605895 - Pnap_3004 - integral membrane protein MviN 2977 66.76 0 3171334..3173451 + 705 121605896 - Pnap_3005 - TonB-dependent receptor 2978 66.52 0 3173509..3174177 + 222 121605897 - Pnap_3006 - ankyrin 2979 62.95 0 3174400..3176121 + 573 121605898 - Pnap_3007 - Pyrrolo-quinoline quinone 2980 62.44 0 3176155..3176745 + 196 121605899 - Pnap_3008 - cytochrome c, class I 2981 59.50 0 3176867..3177187 + 106 121605900 - Pnap_3009 - ribosomal protein S20 2982 60.75 0 3177325..3177645 - 106 121605901 - Pnap_3010 - hypothetical protein 2983 63.29 0 3177886..3179100 + 404 121605902 - Pnap_3011 - acetylornithine aminotransferase 2984 61.72 0 3179110..3180039 + 309 121605903 - Pnap_3012 - ornithine carbamoyltransferase 2985 63.71 0 3180309..3181829 + 506 121605904 - Pnap_3013 - aldehyde dehydrogenase 2986 56.98 -1 3181950..3182744 + 264 121605905 - Pnap_3014 - hypothetical protein 2987 60.88 0 3182741..3183742 + 333 121605906 - Pnap_3015 - hypothetical protein 2988 58.47 0 3183791..3184156 + 121 121605907 - Pnap_3016 - hypothetical protein 2989 64.14 0 3184175..3184927 - 250 121605908 - Pnap_3017 - short-chain dehydrogenase/reductase SDR 2990 65.77 0 3185135..3185806 + 223 121605909 - Pnap_3018 - cyclase family protein 2991 69.64 +1 3185827..3187104 + 425 121605910 - Pnap_3019 - kynureninase 2992 63.13 0 3187106..3187954 + 282 121605911 - Pnap_3020 - tryptophan 2,3-dioxygenase 2993 59.74 0 3188242..3188862 + 206 121605912 - Pnap_3021 - hypothetical protein 2994 58.44 0 3188888..3190600 + 570 121605913 - Pnap_3022 - band 7 protein 2995 71.13 +1 3190704..3191981 - 425 121605914 - Pnap_3023 - monooxygenase, FAD-binding 2996 64.71 0 3192052..3195021 - 989 121605915 - Pnap_3024 - aconitate hydratase 2997 62.85 0 3195100..3196515 + 471 121605916 - Pnap_3025 - peptidase U32 2998 61.47 0 3196512..3196742 + 76 121605917 - Pnap_3026 - hypothetical protein 2999 62.73 0 3196850..3199465 - 871 121605918 - Pnap_3027 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 3000 59.67 0 3199540..3200211 - 223 121605919 - Pnap_3028 - hypothetical protein 3001 59.29 0 3200241..3201230 - 329 121605920 - Pnap_3029 - HpcH/HpaI aldolase 3002 61.09 0 3201325..3202311 - 328 121605921 - Pnap_3030 - malate dehydrogenase 3003 61.21 0 3202526..3203386 + 286 121605922 - Pnap_3031 - UbiC transcription regulator-associated domain-containing protein 3004 59.06 0 3203516..3203962 + 148 121605923 - Pnap_3032 - succinate dehydrogenase, cytochrome b subunit 3005 56.83 -1 3204039..3204404 + 121 121605924 - Pnap_3033 - succinate dehydrogenase, cytochrome b subunit 3006 61.76 0 3204466..3206259 + 597 121605925 - Pnap_3034 - succinate dehydrogenase, flavoprotein subunit 3007 59.01 0 3206303..3207007 + 234 121605926 - Pnap_3035 - succinate dehydrogenase and fumarate reductase iron-sulfur protein 3008 53.72 -1 3207030..3207338 + 102 121605927 - Pnap_3036 - hypothetical protein 3009 59.34 0 3207373..3208683 + 436 121605928 gltA Pnap_3037 - type II citrate synthase 3010 60.46 0 3208913..3209878 + 321 121605929 - Pnap_3038 - LysR family transcriptional regulator 3011 64.19 0 3209909..3211360 + 483 121605930 - Pnap_3039 - isopropylmalate isomerase large subunit 3012 59.91 0 3211375..3212025 + 216 121605931 leuD Pnap_3040 - isopropylmalate isomerase small subunit 3013 64.33 0 3212099..3213169 + 356 121605932 - Pnap_3041 - 3-isopropylmalate dehydrogenase 3014 62.11 0 3213429..3214568 + 379 121605933 - Pnap_3042 - aspartate-semialdehyde dehydrogenase 3015 60.43 0 3214820..3217432 + 870 121605934 - Pnap_3043 - putative transmembrane protein 3016 62.14 0 3217475..3218269 + 264 121605935 - Pnap_3044 - tRNA pseudouridine synthase A 3017 57.85 0 3218266..3218991 + 241 121605936 - Pnap_3045 - phosphoribosylanthranilate isomerase 3018 62.53 0 3218969..3220273 + 434 121605937 - Pnap_3046 - tryptophan synthase subunit beta 3019 61.66 0 3220270..3221088 + 272 121605938 - Pnap_3047 - tryptophan synthase subunit alpha 3020 61.97 0 3221248..3222120 + 290 121605939 - Pnap_3048 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3021 59.43 0 3222216..3222920 + 234 121605940 - Pnap_3049 - peptidase S16, lon domain-containing protein 3022 61.69 0 3223068..3224633 + 521 121605941 - Pnap_3050 - lysyl-tRNA synthetase 3023 55.66 -1 3224962..3225579 + 205 121605942 - Pnap_3051 - hypothetical protein 3024 62.19 0 3225668..3226852 - 394 121605943 - Pnap_3052 - patatin 3025 67.18 0 3226937..3228868 - 643 121605944 - Pnap_3053 - hypothetical protein 3026 53.21 -1 3228912..3229223 + 103 121605945 - Pnap_3054 - hypothetical protein 3027 56.67 -1 3229220..3229729 + 169 121605946 - Pnap_3055 - hypothetical protein 3028 64.97 0 3229752..3230810 - 352 121605947 - Pnap_3056 - glycoside hydrolase family 3 protein 3029 63.36 0 3230876..3231268 - 130 121605948 acpS Pnap_3057 - 4'-phosphopantetheinyl transferase 3030 63.54 0 3231268..3232098 - 276 121605949 - Pnap_3058 - pyridoxal phosphate biosynthetic protein PdxJ 3031 63.07 0 3232123..3232872 - 249 121605950 - Pnap_3059 - DNA repair protein RecO 3032 62.66 0 3232921..3233994 - 357 121605951 - Pnap_3060 - GTP-binding protein Era 3033 61.25 0 3234050..3234751 - 233 121605952 - Pnap_3061 - ribonuclease III 3034 56.14 -1 3234752..3235093 - 113 121605953 - Pnap_3062 - putative transmembrane protein 3035 57.16 -1 3235163..3236140 - 325 121605954 - Pnap_3063 - signal peptidase I 3036 60.21 0 3236140..3237951 - 603 121605955 - Pnap_3064 - GTP-binding protein LepA 3037 62.67 0 3238292..3239767 - 491 121605956 - Pnap_3065 - protease Do 3038 59.10 0 3239890..3240933 - 347 121605957 - Pnap_3066 - putative sigma E regulatory protein, MucB/RseB 3039 63.71 0 3240935..3241576 - 213 121605958 - Pnap_3067 - anti sigma-E protein, RseA 3040 57.55 0 3241659..3242294 - 211 121605959 - Pnap_3068 - RNA polymerase sigma factor RpoE 3041 64.43 0 3242291..3242827 - 178 121605960 - Pnap_3069 - hypothetical protein 3042 59.84 0 3242874..3244118 - 414 121605961 - Pnap_3070 - beta-ketoacyl synthase 3043 50.42 -2 3244195..3244434 - 79 121605962 - Pnap_3071 - acyl carrier protein 3044 63.05 0 3244600..3245346 - 248 121605963 - Pnap_3072 - 3-oxoacyl-(acyl-carrier-protein) reductase 3045 62.36 0 3245343..3246293 - 316 121605964 - Pnap_3073 - malonyl CoA-acyl carrier protein transacylase 3046 65.12 0 3246384..3247028 - 214 121605965 - Pnap_3074 - hypothetical protein 3047 61.18 0 3247006..3248391 - 461 121605966 - Pnap_3075 - BNR/Asp-box repeat-containing protein 3048 61.55 0 3248444..3249421 - 325 121605967 - Pnap_3076 - 3-oxoacyl-(acyl carrier protein) synthase III 3049 60.56 0 3249426..3250538 - 370 121605968 - Pnap_3077 - fatty acid/phospholipid synthesis protein PlsX 3050 55.19 -1 3250623..3250805 - 60 121605969 rpmF Pnap_3078 - 50S ribosomal protein L32 3051 60.36 0 3251028..3251582 - 184 121605970 - Pnap_3079 - hypothetical protein 3052 65.48 0 3251608..3252279 + 223 121605971 - Pnap_3080 - maf protein 3053 64.97 0 3252276..3253040 + 254 121605972 - Pnap_3081 - putative transmembrane protein 3054 59.28 0 3253111..3254193 - 360 121605973 - Pnap_3082 - peptidase S49 3055 62.30 0 3254215..3254580 - 121 121605974 - Pnap_3083 - Rieske (2Fe-2S) domain-containing protein 3056 64.39 0 3254596..3255255 - 219 121605975 - Pnap_3084 - HAD family hydrolase 3057 64.24 0 3255310..3256506 - 398 121605976 - Pnap_3085 - RluA family pseudouridine synthase 3058 66.76 0 3257099..3260329 + 1076 121605977 - Pnap_3086 - ribonuclease 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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