version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2505 55.50 -1 2664051..2665205 + 384 121605424 - Pnap_2529 - hypothetical protein 2506 55.54 -1 2665222..2667207 + 661 121605425 - Pnap_2530 - TRAG family protein 2507 53.71 -1 2667227..2667751 + 174 121605426 - Pnap_2531 - conjugal transfer protein TraF 2508 54.69 -1 2667794..2668369 - 191 121605427 - Pnap_2532 - hypothetical protein 2509 56.36 -1 2668994..2670973 - 659 121605428 - Pnap_2533 - relaxase/mobilization nuclease family protein 2510 51.48 -2 2671629..2671898 + 89 121605429 - Pnap_2534 - hypothetical protein 2511 55.56 -1 2671898..2672176 + 92 121605430 - Pnap_2535 - hypothetical protein 2512 52.36 -1 2673124..2673738 - 204 121605431 - Pnap_2536 - polyhydroxyalkonate synthesis repressor, PhaR 2513 61.78 0 2674053..2676323 - 756 121605432 - Pnap_2537 - (p)ppGpp synthetase I, SpoT/RelA 2514 66.23 0 2676354..2677274 - 306 121605433 - Pnap_2538 - alpha/beta hydrolase fold 2515 61.94 0 2677400..2678182 + 260 121605434 - Pnap_2539 - 3-hydroxybutyrate dehydrogenase 2516 64.30 0 2678219..2679064 - 281 121605435 - Pnap_2540 - N-formylglutamate amidohydrolase 2517 61.25 0 2679318..2679908 + 196 121605436 - Pnap_2541 - OmpA domain-containing protein 2518 62.22 0 2680164..2680613 + 149 121605437 - Pnap_2542 - transmembrane pair domain-containing protein 2519 67.28 0 2680622..2681437 - 271 121605438 - Pnap_2543 - metallophosphoesterase 2520 65.23 0 2681445..2682416 - 323 121605439 - Pnap_2544 - diacylglycerol kinase, catalytic region 2521 63.91 0 2682441..2683166 - 241 121605440 - Pnap_2545 - hypothetical protein 2522 63.55 0 2683542..2684279 + 245 121605441 ompR Pnap_2546 - osmolarity response regulator 2523 63.18 0 2684388..2685764 + 458 121605442 - Pnap_2547 - integral membrane sensor signal transduction histidine kinase 2524 68.26 +1 2685857..2686357 - 166 121605443 - Pnap_2548 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2525 67.35 0 2686391..2687119 - 242 121605444 - Pnap_2549 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2526 64.66 0 2687152..2690637 + 1161 121605445 - Pnap_2550 - transcription-repair coupling factor 2527 57.28 -1 2690686..2690994 + 102 121605446 - Pnap_2551 - virulence-associated protein VapB-like protein 2528 62.53 0 2690991..2691449 + 152 121605447 - Pnap_2552 - PilT domain-containing protein 2529 51.14 -2 2691446..2691709 + 87 121605448 - Pnap_2553 - hypothetical protein 2530 64.98 0 2691768..2692478 + 236 121605449 - Pnap_2554 - phosphoserine phosphatase SerB 2531 67.26 0 2692491..2693828 - 445 121605450 - Pnap_2555 - hypothetical protein 2532 66.04 0 2693915..2694235 - 106 121605451 - Pnap_2556 - HNH nuclease 2533 57.44 0 2694363..2694839 + 158 121605452 - Pnap_2557 - bacterioferritin 2534 58.87 0 2695115..2697397 + 760 121605453 - Pnap_2558 - TonB-dependent siderophore receptor 2535 64.47 0 2697480..2698163 + 227 121605454 - Pnap_2559 - putative hydroxylase 2536 70.70 +1 2698160..2699350 + 396 121605455 - Pnap_2560 - FMN-dependent alpha-hydroxy acid dehydrogenase 2537 64.34 0 2699606..2700808 + 400 121605456 - Pnap_2561 - putative iron-regulated protein 2538 68.28 +1 2700819..2702246 + 475 121605457 - Pnap_2562 - hypothetical protein 2539 70.90 +1 2702243..2703352 + 369 121605458 - Pnap_2563 - periplasmic lipoprotein-like protein 2540 69.95 +1 2703358..2704515 + 385 121605459 - Pnap_2564 - hypothetical protein 2541 51.03 -2 2704756..2704998 - 80 121605460 - Pnap_2565 - hypothetical protein 2542 61.48 0 2705159..2705428 + 89 121605461 - Pnap_2566 - hypothetical protein 2543 64.96 0 2705572..2705805 + 77 121605462 - Pnap_2567 - hypothetical protein 2544 67.96 0 2705873..2706643 + 256 121605463 - Pnap_2568 - TonB family protein 2545 65.43 0 2706666..2707394 + 242 121605464 - Pnap_2569 - MotA/TolQ/ExbB proton channel 2546 62.53 0 2707397..2707807 + 136 121605465 - Pnap_2570 - biopolymer transport protein ExbD/TolR 2547 62.25 0 2707819..2708022 + 67 121605466 - Pnap_2571 - hypothetical protein 2548 66.18 0 2708202..2708609 - 135 121605467 - Pnap_2572 - hypothetical protein 2549 63.35 0 2708817..2709509 + 230 121605468 - Pnap_2573 - hypothetical protein 2550 61.61 0 2709588..2710121 + 177 121605469 - Pnap_2574 - transposase and inactivated derivative 2551 64.79 0 2710126..2710659 + 177 121605470 - Pnap_2575 - ISSod10, transposase OrfB 2552 65.38 0 2710747..2712219 - 490 121605471 rumA Pnap_2576 - 23S rRNA 5-methyluridine methyltransferase 2553 64.13 0 2712352..2713257 - 301 121605472 - Pnap_2577 - peptidase M23B 2554 64.35 0 2713322..2714185 - 287 121605473 - Pnap_2578 - protein-L-isoaspartate O-methyltransferase 2555 64.12 0 2714200..2714985 - 261 121605474 - Pnap_2579 - stationary-phase survival protein SurE 2556 67.18 0 2715138..2716112 + 324 121605475 - Pnap_2580 - alcohol dehydrogenase 2557 68.21 +1 2716135..2716974 - 279 121605476 - Pnap_2581 - hypothetical protein 2558 65.55 0 2717087..2717443 - 118 121605477 - Pnap_2582 - hypothetical protein 2559 64.86 0 2717544..2718482 - 312 121605478 - Pnap_2583 - LysR family transcriptional regulator 2560 66.67 0 2718543..2719535 + 330 121605479 - Pnap_2584 - NAD-dependent epimerase/dehydratase 2561 67.88 0 2719578..2720318 - 246 121605480 - Pnap_2585 - NADPH-dependent FMN reductase 2562 63.66 0 2720305..2720736 - 143 121605481 - Pnap_2586 - arsenate reductase 2563 68.64 +1 2720818..2721171 + 117 121605482 - Pnap_2587 - regulatory protein, ArsR 2564 67.26 0 2721267..2721770 + 167 121605483 - Pnap_2588 - protein tyrosine phosphatase 2565 63.06 0 2721797..2722849 + 350 121605484 - Pnap_2589 - arsenical-resistance protein 2566 66.67 0 2722921..2723442 - 173 121605485 - Pnap_2590 - GCN5-related N-acetyltransferase 2567 70.69 +1 2723682..2725073 + 463 121605486 - Pnap_2591 - RND family efflux transporter MFP subunit 2568 66.43 0 2725070..2728396 + 1108 121605487 - Pnap_2592 - acriflavin resistance protein 2569 66.79 0 2729231..2732449 + 1072 121605488 - Pnap_2593 - acriflavin resistance protein 2570 70.64 +1 2732458..2733891 + 477 121605489 - Pnap_2594 - RND efflux system outer membrane lipoprotein 2571 65.65 0 2734486..2734878 + 130 121605490 - Pnap_2595 - hypothetical protein 2572 66.01 0 2734884..2735189 + 101 121605491 - Pnap_2596 - hypothetical protein 2573 64.16 0 2735254..2735811 - 185 121605492 - Pnap_2597 - rare lipoprotein A 2574 60.07 0 2735835..2736122 + 95 121605493 - Pnap_2598 - hypothetical protein 2575 56.54 -1 2736710..2737114 + 134 121605494 - Pnap_2600 - glyoxalase/bleomycin resistance protein/dioxygenase 2576 69.07 +1 2737166..2738164 - 332 121605495 - Pnap_2601 - ribokinase-like domain-containing protein 2577 63.96 0 2738295..2739293 + 332 121605496 - Pnap_2602 - periplasmic binding protein/LacI transcriptional regulator 2578 60.22 0 2739467..2740474 + 335 121605497 - Pnap_2603 - porin 2579 60.69 0 2740617..2741570 + 317 121605498 - Pnap_2604 - inner-membrane translocator 2580 62.75 0 2741570..2742361 + 263 121605499 - Pnap_2605 - ABC transporter related 2581 63.13 0 2742388..2742840 + 150 121605500 - Pnap_2606 - RbsD or FucU transport 2582 67.57 0 2742837..2744051 + 404 121605501 - Pnap_2607 - ROK family protein 2583 61.88 0 2744275..2745276 + 333 121605502 - Pnap_2608 - periplasmic binding protein/LacI transcriptional regulator 2584 64.56 0 2745429..2746760 - 443 121605503 - Pnap_2609 - phosphoglucosamine mutase 2585 65.14 0 2746904..2747755 - 283 121605504 - Pnap_2610 - dihydropteroate synthase 2586 61.79 0 2747862..2749790 - 642 121605505 - Pnap_2611 - ATP-dependent metalloprotease FtsH 2587 59.62 0 2749940..2750677 - 245 121605506 - Pnap_2612 - ribosomal RNA methyltransferase RrmJ/FtsJ 2588 62.05 0 2750719..2751195 + 158 121605507 - Pnap_2613 - hypothetical protein 2589 64.48 0 2751305..2753362 + 685 121605508 - Pnap_2614 - oligopeptidase A 2590 65.65 0 2753386..2754075 + 229 121605509 - Pnap_2615 - glutaredoxin 2591 63.07 0 2754113..2754862 - 249 121605510 - Pnap_2616 - ribose-5-phosphate isomerase A 2592 66.38 0 2754928..2755980 + 350 121605511 - Pnap_2617 - dihydroorotate dehydrogenase 2 2593 65.02 0 2756243..2757214 + 323 121605512 - Pnap_2618 - hypothetical protein 2594 69.10 +1 2757211..2757990 + 259 121605513 - Pnap_2619 - hypothetical protein 2595 58.53 0 2758057..2758314 - 85 121605514 - Pnap_2620 - hypothetical protein 2596 64.82 0 2758394..2758990 + 198 121605515 - Pnap_2621 - 3'-5' exonuclease 2597 64.63 0 2759051..2759689 - 212 121605516 - Pnap_2622 - hypothetical protein 2598 63.16 0 2759782..2761035 + 417 121605517 - Pnap_2623 - hypothetical protein 2599 64.56 0 2761157..2762200 - 347 121605518 - Pnap_2624 - helix-turn-helix domain-containing protein 2600 61.93 0 2762407..2763798 + 463 121605519 - Pnap_2625 - ethanolamine transproter 2601 64.88 0 2763806..2765203 + 465 121605520 - Pnap_2626 - ethanolamine ammonia lyase large subunit 2602 65.74 0 2765226..2766086 + 286 121605521 - Pnap_2627 - ethanolamine ammonia-lyase small subunit 2603 63.89 0 2766092..2768716 - 874 121605522 - Pnap_2628 - alanyl-tRNA synthetase 2604 64.80 0 2768789..2770180 - 463 121605523 - Pnap_2629 - GntR family transcriptional regulator 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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