version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2436 58.83 0 2599246..2599998 - 250 121605355 - Pnap_2457 - ABC transporter related 2437 58.52 0 2599995..2600951 - 318 121605356 - Pnap_2458 - inner-membrane translocator 2438 59.44 0 2600948..2601874 - 308 121605357 - Pnap_2459 - inner-membrane translocator 2439 57.80 0 2601874..2603046 - 390 121605358 - Pnap_2460 - extracellular ligand-binding receptor 2440 55.87 -1 2603082..2603396 - 104 121605359 - Pnap_2461 - Rieske (2Fe-2S) domain-containing protein 2441 51.52 -2 2603406..2603735 - 109 121605360 - Pnap_2462 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2442 60.68 0 2604381..2605148 + 255 121605361 - Pnap_2464 - IstB ATP binding domain-containing protein 2443 53.65 -1 2605625..2606584 - 319 121605362 - Pnap_2465 - proline dehydrogenase 2444 51.71 -2 2606589..2607230 - 213 121605363 - Pnap_2466 - GntR family transcriptional regulator 2445 61.73 0 2607554..2608363 - 269 121605364 - Pnap_2467 - IstB ATP binding domain-containing protein 2446 62.07 0 2608360..2609904 - 514 121605365 - Pnap_2468 - integrase catalytic subunit 2447 63.78 0 2609888..2610199 - 103 121605366 - Pnap_2469 - hypothetical protein 2448 57.10 -1 2610519..2610821 - 100 121605367 - Pnap_2470 - recombinase 2449 58.27 0 2610961..2611353 - 130 121605368 - Pnap_2471 - transposase IS3/IS911 family protein 2450 53.82 -1 2611702..2612736 - 344 121605369 - Pnap_2472 - transposase IS116/IS110/IS902 family protein 2451 58.78 0 2612897..2613175 + 92 121605370 - Pnap_2473 - hypothetical protein 2452 60.92 0 2613247..2614116 - 289 121605371 - Pnap_2474 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2453 68.36 +1 2614388..2615392 - 334 121605372 - Pnap_2476 - cupin 2 domain-containing protein 2454 55.94 -1 2615493..2616098 - 201 121605373 - Pnap_2477 - glutathione S-transferase domain-containing protein 2455 52.69 -1 2616304..2616897 - 197 121605374 - Pnap_2478 - DSBA oxidoreductase 2456 56.26 -1 2617087..2618124 - 345 121605375 - Pnap_2479 - dihydrodipicolinate synthetase 2457 55.66 -1 2618182..2618817 - 211 121605376 - Pnap_2480 - OmpW family protein 2458 55.56 -1 2618892..2619800 - 302 121605377 - Pnap_2481 - glyoxalase/bleomycin resistance protein/dioxygenase 2459 59.78 0 2619826..2621277 - 483 121605378 - Pnap_2482 - aldehyde dehydrogenase 2460 56.28 -1 2621326..2622105 - 259 121605379 - Pnap_2483 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2461 52.99 -1 2622169..2622753 - 194 121605380 - Pnap_2484 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2462 54.76 -1 2622768..2624111 - 447 121605381 - Pnap_2485 - ring hydroxylating dioxygenase, alpha subunit 2463 56.64 -1 2624176..2624514 - 112 121605382 - Pnap_2486 - Rieske (2Fe-2S) domain-containing protein 2464 51.65 -2 2624524..2625009 - 161 121605383 - Pnap_2487 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2465 55.58 -1 2625012..2626274 - 420 121605384 - Pnap_2488 - Rieske (2Fe-2S) domain-containing protein 2466 57.55 0 2626320..2627306 - 328 121605385 - Pnap_2489 - oxidoreductase FAD-binding subunit 2467 54.23 -1 2627423..2628379 + 318 121605386 - Pnap_2490 - LysR family transcriptional regulator 2468 52.71 -1 2628931..2629539 + 202 121605387 - Pnap_2491 - hypothetical protein 2469 53.36 -1 2629576..2630334 + 252 121605388 - Pnap_2492 - hypothetical protein 2470 59.97 0 2630331..2630942 + 203 121605389 - Pnap_2493 - hypothetical protein 2471 59.66 0 2630954..2631538 + 194 121605390 - Pnap_2494 - lytic transglycosylase, catalytic 2472 51.89 -2 2631468..2632022 - 184 121605391 - Pnap_2495 - hypothetical protein 2473 45.94 -2 2632055..2632411 - 118 121605392 - Pnap_2496 - hypothetical protein 2474 52.48 -1 2632633..2633598 + 321 121605393 - Pnap_2497 - type II secretion system protein E 2475 56.47 -1 2633963..2634217 + 84 121605394 - Pnap_2498 - hypothetical protein 2476 55.67 -1 2634497..2635378 + 293 121605395 - Pnap_2499 - hypothetical protein 2477 63.19 0 2635393..2635536 - 47 121605396 - Pnap_2500 - hypothetical protein 2478 59.65 0 2635951..2636292 + 113 121605397 - Pnap_2501 - conjugal transfer protein TrbC 2479 56.48 -1 2636319..2636642 + 107 121605398 - Pnap_2502 - conjugal transfer TrbD family protein 2480 57.59 0 2636646..2639090 + 814 121605399 - Pnap_2503 - CagE, TrbE, VirB component of type IV transporter system 2481 52.14 -1 2639249..2639950 + 233 121605400 - Pnap_2504 - conjugal transfer protein TrbJ 2482 57.50 0 2639965..2641590 + 541 121605401 - Pnap_2505 - Type IV secretory pathway TrbL components-like protein 2483 56.93 -1 2641600..2643099 + 499 121605402 - Pnap_2506 - hypothetical protein 2484 57.68 0 2643196..2644107 - 303 121605403 - Pnap_2507 - hypothetical protein 2485 56.45 -1 2644104..2645297 - 397 121605404 - Pnap_2508 - hypothetical protein 2486 57.34 -1 2645366..2646019 + 217 121605405 - Pnap_2509 - conjugal transfer protein 2487 54.92 -1 2646379..2647161 + 260 121605406 - Pnap_2510 - conjugal transfer protein TrbG/VirB9/CagX 2488 56.42 -1 2647158..2648630 + 490 121605407 - Pnap_2511 - conjugation TrbI family protein 2489 57.28 -1 2648780..2649514 - 244 121605408 - Pnap_2512 - cytochrome c biogenesis protein, transmembrane region 2490 53.28 -1 2649527..2649907 - 126 121605409 - Pnap_2513 - thioredoxin domain-containing protein 2491 54.31 -1 2650031..2650564 + 177 121605410 - Pnap_2514 - hypothetical protein 2492 56.16 -1 2650603..2651211 + 202 121605411 - Pnap_2515 - TetR family transcriptional regulator 2493 60.88 0 2651284..2651871 + 195 121605412 - Pnap_2516 - late embryogenesis abundant protein 2494 58.61 0 2651981..2652427 + 148 121605413 - Pnap_2517 - hypothetical protein 2495 59.68 0 2652625..2653311 + 228 121605414 - Pnap_2518 - hypothetical protein 2496 62.55 0 2653326..2655074 + 582 121605415 - Pnap_2519 - hypothetical protein 2497 65.86 0 2655495..2657105 - 536 121605416 - Pnap_2521 - transposase IS66 2498 64.97 0 2657188..2657541 - 117 121605417 - Pnap_2522 - IS66 Orf2 family protein 2499 64.16 0 2657529..2657966 - 145 121605418 - Pnap_2523 - transposase IS3/IS911 family protein 2500 59.59 0 2659689..2660465 + 258 121605419 phnP Pnap_2524 - carbon-phosphorus lyase complex accessory protein 2501 59.00 0 2660462..2661322 + 286 121605420 - Pnap_2525 - hypothetical protein 2502 51.67 -2 2661429..2661728 - 99 121605421 - Pnap_2526 - hypothetical protein 2503 56.47 -1 2661836..2662453 + 205 121605422 - Pnap_2527 - hypothetical protein 2504 55.05 -1 2662475..2663851 + 458 121605423 - Pnap_2528 - hypothetical protein 2505 55.50 -1 2664051..2665205 + 384 121605424 - Pnap_2529 - hypothetical protein 2506 55.54 -1 2665222..2667207 + 661 121605425 - Pnap_2530 - TRAG family protein 2507 53.71 -1 2667227..2667751 + 174 121605426 - Pnap_2531 - conjugal transfer protein TraF 2508 54.69 -1 2667794..2668369 - 191 121605427 - Pnap_2532 - hypothetical protein 2509 56.36 -1 2668994..2670973 - 659 121605428 - Pnap_2533 - relaxase/mobilization nuclease family protein 2510 51.48 -2 2671629..2671898 + 89 121605429 - Pnap_2534 - hypothetical protein 2511 55.56 -1 2671898..2672176 + 92 121605430 - Pnap_2535 - hypothetical protein 2512 52.36 -1 2673124..2673738 - 204 121605431 - Pnap_2536 - polyhydroxyalkonate synthesis repressor, PhaR 2513 61.78 0 2674053..2676323 - 756 121605432 - Pnap_2537 - (p)ppGpp synthetase I, SpoT/RelA 2514 66.23 0 2676354..2677274 - 306 121605433 - Pnap_2538 - alpha/beta hydrolase fold 2515 61.94 0 2677400..2678182 + 260 121605434 - Pnap_2539 - 3-hydroxybutyrate dehydrogenase 2516 64.30 0 2678219..2679064 - 281 121605435 - Pnap_2540 - N-formylglutamate amidohydrolase 2517 61.25 0 2679318..2679908 + 196 121605436 - Pnap_2541 - OmpA domain-containing protein 2518 62.22 0 2680164..2680613 + 149 121605437 - Pnap_2542 - transmembrane pair domain-containing protein 2519 67.28 0 2680622..2681437 - 271 121605438 - Pnap_2543 - metallophosphoesterase 2520 65.23 0 2681445..2682416 - 323 121605439 - Pnap_2544 - diacylglycerol kinase, catalytic region 2521 63.91 0 2682441..2683166 - 241 121605440 - Pnap_2545 - hypothetical protein 2522 63.55 0 2683542..2684279 + 245 121605441 ompR Pnap_2546 - osmolarity response regulator 2523 63.18 0 2684388..2685764 + 458 121605442 - Pnap_2547 - integral membrane sensor signal transduction histidine kinase 2524 68.26 +1 2685857..2686357 - 166 121605443 - Pnap_2548 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2525 67.35 0 2686391..2687119 - 242 121605444 - Pnap_2549 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2526 64.66 0 2687152..2690637 + 1161 121605445 - Pnap_2550 - transcription-repair coupling factor 2527 57.28 -1 2690686..2690994 + 102 121605446 - Pnap_2551 - virulence-associated protein VapB-like protein 2528 62.53 0 2690991..2691449 + 152 121605447 - Pnap_2552 - PilT domain-containing protein 2529 51.14 -2 2691446..2691709 + 87 121605448 - Pnap_2553 - hypothetical protein 2530 64.98 0 2691768..2692478 + 236 121605449 - Pnap_2554 - phosphoserine phosphatase SerB 2531 67.26 0 2692491..2693828 - 445 121605450 - Pnap_2555 - hypothetical protein 2532 66.04 0 2693915..2694235 - 106 121605451 - Pnap_2556 - HNH nuclease 2533 57.44 0 2694363..2694839 + 158 121605452 - Pnap_2557 - bacterioferritin 2534 58.87 0 2695115..2697397 + 760 121605453 - Pnap_2558 - TonB-dependent siderophore receptor 2535 64.47 0 2697480..2698163 + 227 121605454 - Pnap_2559 - putative hydroxylase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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