version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2390 62.21 0 2545878..2549153 + 1091 121605309 - Pnap_2410 - NHL repeat-containing protein 2391 60.19 0 2549257..2549565 - 102 121605310 - Pnap_2411 - hypothetical protein 2392 62.66 0 2549679..2550227 - 182 121605311 - Pnap_2412 - DSBA oxidoreductase 2393 64.32 0 2550396..2550608 + 70 121605312 - Pnap_2413 - hypothetical protein 2394 61.64 0 2550642..2551019 - 125 121605313 - Pnap_2414 - hypothetical protein 2395 57.78 0 2551442..2551666 - 74 121605314 - Pnap_2415 - TOBE domain-containing protein 2396 69.25 +1 2551777..2552589 - 270 121605315 - Pnap_2416 - ABC transporter related 2397 65.45 0 2552599..2553501 - 300 121605316 - Pnap_2417 - binding-protein-dependent transport systems inner membrane component 2398 66.41 0 2553523..2554686 - 387 121605317 - Pnap_2418 - alkanesulfonate monooxygenase 2399 65.81 0 2554706..2555755 - 349 121605318 - Pnap_2419 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 2400 63.64 0 2555781..2556803 - 340 121605319 - Pnap_2420 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 2401 67.67 0 2556926..2557525 - 199 121605320 - Pnap_2421 - NADPH-dependent FMN reductase 2402 63.47 0 2557586..2558617 - 343 121605321 - Pnap_2422 - sulfate ABC transporter, periplasmic sulfate-binding protein 2403 62.77 0 2558764..2559045 + 93 121605322 - Pnap_2423 - hypothetical protein 2404 69.02 +1 2559055..2560968 + 637 121605323 - Pnap_2424 - hypothetical protein 2405 62.30 0 2561038..2562273 - 411 121605324 - Pnap_2425 - extracellular ligand-binding receptor 2406 66.41 0 2562506..2563297 + 263 121605325 - Pnap_2426 - hypothetical protein 2407 66.72 0 2563389..2565197 + 602 121605326 - Pnap_2427 - nitrite/sulfite reductase hemoprotein beta subunit 2408 61.69 0 2565236..2565637 + 133 121605327 - Pnap_2428 - hypothetical protein 2409 64.40 0 2565649..2566443 + 264 121605328 - Pnap_2429 - phosphoadenylyl-sulfate reductase (thioredoxin) 2410 63.52 0 2566440..2567393 + 317 121605329 - Pnap_2430 - sulfate adenylyltransferase subunit 2 2411 65.30 0 2567393..2568709 + 438 121605330 - Pnap_2431 - sulfate adenylyltransferase, large subunit 2412 59.70 0 2568881..2569210 + 109 121605331 - Pnap_2432 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2413 57.49 0 2569288..2570388 + 366 121605332 - Pnap_2433 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2414 64.14 0 2570465..2571769 + 434 121605333 - Pnap_2434 - permease for cytosine/purines, uracil, thiamine, allantoin 2415 62.35 0 2571753..2572610 - 285 121605334 - Pnap_2435 - phosphomethylpyrimidine kinase 2416 64.48 0 2573052..2574605 + 517 121605335 - Pnap_2436 - carbohydrate kinase, YjeF related protein 2417 62.28 0 2574602..2575171 - 189 121605336 - Pnap_2437 - protein of unknown function YGGT 2418 62.82 0 2575213..2577372 - 719 121605337 - Pnap_2438 - ribonuclease R 2419 57.65 0 2578044..2579429 - 461 121605338 - Pnap_2439 - MiaB-like tRNA modifying enzyme YliG 2420 62.17 0 2579464..2581086 + 540 121605339 - Pnap_2440 - recombinase 2421 62.22 0 2581460..2581774 + 104 121605340 - Pnap_2441 - hypothetical protein 2422 55.70 -1 2581894..2583060 + 388 121605341 - Pnap_2442 - ATPase central domain-containing protein 2423 58.33 0 2583057..2585276 + 739 121605342 - Pnap_2443 - hypothetical protein 2424 49.24 -2 2585330..2586121 + 263 121605343 - Pnap_2444 - ECF subfamily RNA polymerase sigma-24 factor 2425 52.69 -1 2586118..2586711 + 197 121605344 - Pnap_2445 - hypothetical protein 2426 59.02 0 2586714..2590139 + 1141 121605345 - Pnap_2446 - UvrD/REP helicase 2427 59.35 0 2590232..2591161 + 309 121605346 - Pnap_2447 - hypothetical protein 2428 60.71 0 2591158..2592567 + 469 121605347 - Pnap_2448 - UBA/THIF-type NAD/FAD binding protein 2429 53.76 -1 2592632..2592910 + 92 121605348 - Pnap_2449 - hypothetical protein 2430 53.43 -1 2594155..2594577 - 140 121605349 - Pnap_2450 - hypothetical protein 2431 61.82 0 2595386..2596024 - 212 121605350 - Pnap_2452 - maleylacetoacetate isomerase 2432 58.83 0 2596034..2596735 - 233 121605351 - Pnap_2453 - fumarylacetoacetate (FAA) hydrolase 2433 60.98 0 2596829..2597884 - 351 121605352 - Pnap_2454 - cupin 2 domain-containing protein 2434 57.19 -1 2597903..2598493 - 196 121605353 - Pnap_2455 - hemerythrin HHE cation binding region 2435 57.42 0 2598530..2599243 - 237 121605354 - Pnap_2456 - ABC transporter related 2436 58.83 0 2599246..2599998 - 250 121605355 - Pnap_2457 - ABC transporter related 2437 58.52 0 2599995..2600951 - 318 121605356 - Pnap_2458 - inner-membrane translocator 2438 59.44 0 2600948..2601874 - 308 121605357 - Pnap_2459 - inner-membrane translocator 2439 57.80 0 2601874..2603046 - 390 121605358 - Pnap_2460 - extracellular ligand-binding receptor 2440 55.87 -1 2603082..2603396 - 104 121605359 - Pnap_2461 - Rieske (2Fe-2S) domain-containing protein 2441 51.52 -2 2603406..2603735 - 109 121605360 - Pnap_2462 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2442 60.68 0 2604381..2605148 + 255 121605361 - Pnap_2464 - IstB ATP binding domain-containing protein 2443 53.65 -1 2605625..2606584 - 319 121605362 - Pnap_2465 - proline dehydrogenase 2444 51.71 -2 2606589..2607230 - 213 121605363 - Pnap_2466 - GntR family transcriptional regulator 2445 61.73 0 2607554..2608363 - 269 121605364 - Pnap_2467 - IstB ATP binding domain-containing protein 2446 62.07 0 2608360..2609904 - 514 121605365 - Pnap_2468 - integrase catalytic subunit 2447 63.78 0 2609888..2610199 - 103 121605366 - Pnap_2469 - hypothetical protein 2448 57.10 -1 2610519..2610821 - 100 121605367 - Pnap_2470 - recombinase 2449 58.27 0 2610961..2611353 - 130 121605368 - Pnap_2471 - transposase IS3/IS911 family protein 2450 53.82 -1 2611702..2612736 - 344 121605369 - Pnap_2472 - transposase IS116/IS110/IS902 family protein 2451 58.78 0 2612897..2613175 + 92 121605370 - Pnap_2473 - hypothetical protein 2452 60.92 0 2613247..2614116 - 289 121605371 - Pnap_2474 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2453 68.36 +1 2614388..2615392 - 334 121605372 - Pnap_2476 - cupin 2 domain-containing protein 2454 55.94 -1 2615493..2616098 - 201 121605373 - Pnap_2477 - glutathione S-transferase domain-containing protein 2455 52.69 -1 2616304..2616897 - 197 121605374 - Pnap_2478 - DSBA oxidoreductase 2456 56.26 -1 2617087..2618124 - 345 121605375 - Pnap_2479 - dihydrodipicolinate synthetase 2457 55.66 -1 2618182..2618817 - 211 121605376 - Pnap_2480 - OmpW family protein 2458 55.56 -1 2618892..2619800 - 302 121605377 - Pnap_2481 - glyoxalase/bleomycin resistance protein/dioxygenase 2459 59.78 0 2619826..2621277 - 483 121605378 - Pnap_2482 - aldehyde dehydrogenase 2460 56.28 -1 2621326..2622105 - 259 121605379 - Pnap_2483 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2461 52.99 -1 2622169..2622753 - 194 121605380 - Pnap_2484 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2462 54.76 -1 2622768..2624111 - 447 121605381 - Pnap_2485 - ring hydroxylating dioxygenase, alpha subunit 2463 56.64 -1 2624176..2624514 - 112 121605382 - Pnap_2486 - Rieske (2Fe-2S) domain-containing protein 2464 51.65 -2 2624524..2625009 - 161 121605383 - Pnap_2487 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2465 55.58 -1 2625012..2626274 - 420 121605384 - Pnap_2488 - Rieske (2Fe-2S) domain-containing protein 2466 57.55 0 2626320..2627306 - 328 121605385 - Pnap_2489 - oxidoreductase FAD-binding subunit 2467 54.23 -1 2627423..2628379 + 318 121605386 - Pnap_2490 - LysR family transcriptional regulator 2468 52.71 -1 2628931..2629539 + 202 121605387 - Pnap_2491 - hypothetical protein 2469 53.36 -1 2629576..2630334 + 252 121605388 - Pnap_2492 - hypothetical protein 2470 59.97 0 2630331..2630942 + 203 121605389 - Pnap_2493 - hypothetical protein 2471 59.66 0 2630954..2631538 + 194 121605390 - Pnap_2494 - lytic transglycosylase, catalytic 2472 51.89 -2 2631468..2632022 - 184 121605391 - Pnap_2495 - hypothetical protein 2473 45.94 -2 2632055..2632411 - 118 121605392 - Pnap_2496 - hypothetical protein 2474 52.48 -1 2632633..2633598 + 321 121605393 - Pnap_2497 - type II secretion system protein E 2475 56.47 -1 2633963..2634217 + 84 121605394 - Pnap_2498 - hypothetical protein 2476 55.67 -1 2634497..2635378 + 293 121605395 - Pnap_2499 - hypothetical protein 2477 63.19 0 2635393..2635536 - 47 121605396 - Pnap_2500 - hypothetical protein 2478 59.65 0 2635951..2636292 + 113 121605397 - Pnap_2501 - conjugal transfer protein TrbC 2479 56.48 -1 2636319..2636642 + 107 121605398 - Pnap_2502 - conjugal transfer TrbD family protein 2480 57.59 0 2636646..2639090 + 814 121605399 - Pnap_2503 - CagE, TrbE, VirB component of type IV transporter system 2481 52.14 -1 2639249..2639950 + 233 121605400 - Pnap_2504 - conjugal transfer protein TrbJ 2482 57.50 0 2639965..2641590 + 541 121605401 - Pnap_2505 - Type IV secretory pathway TrbL components-like protein 2483 56.93 -1 2641600..2643099 + 499 121605402 - Pnap_2506 - hypothetical protein 2484 57.68 0 2643196..2644107 - 303 121605403 - Pnap_2507 - hypothetical protein 2485 56.45 -1 2644104..2645297 - 397 121605404 - Pnap_2508 - hypothetical protein 2486 57.34 -1 2645366..2646019 + 217 121605405 - Pnap_2509 - conjugal transfer protein 2487 54.92 -1 2646379..2647161 + 260 121605406 - Pnap_2510 - conjugal transfer protein TrbG/VirB9/CagX 2488 56.42 -1 2647158..2648630 + 490 121605407 - Pnap_2511 - conjugation TrbI family protein 2489 57.28 -1 2648780..2649514 - 244 121605408 - Pnap_2512 - cytochrome c biogenesis protein, transmembrane region 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0