version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1946 66.67 0 2087094..2087441 - 115 121604865 - Pnap_1964 - hydrogenase expression/synthesis, HypA 1947 68.20 +1 2087434..2088606 - 390 121604866 - Pnap_1965 - hypothetical protein 1948 66.11 0 2088599..2089141 - 180 121604867 - Pnap_1966 - hypothetical protein 1949 68.72 +1 2089145..2089387 - 80 121604868 - Pnap_1967 - rubredoxin-type Fe(Cys)4 protein 1950 65.17 0 2089384..2090250 - 288 121604869 - Pnap_1968 - HupH hydrogenase expression protein 1951 68.43 +1 2090268..2090777 - 169 121604870 - Pnap_1969 - hydrogenase-1 expression HyaE 1952 63.91 0 2090800..2091126 - 108 121604871 - Pnap_1970 - hydrogenase assembly chaperone hypC/hupF 1953 65.33 0 2091134..2091805 - 223 121604872 - Pnap_1971 - hydrogenase expression/formation protein 1954 62.89 0 2091892..2092632 - 246 121604873 - Pnap_1972 - Ni/Fe-hydrogenase, b-type cytochrome subunit 1955 71.57 +1 2092648..2093238 - 196 121604874 - Pnap_1973 - HupE/UreJ protein 1956 63.49 0 2093280..2095136 - 618 121604875 - Pnap_1974 - nickel-dependent hydrogenase, large subunit 1957 64.02 0 2095169..2096263 - 364 121604876 - Pnap_1975 - hydrogenase (NiFe) small subunit HydA 1958 70.80 +1 2096724..2099024 - 766 121604877 - Pnap_1976 - von Willebrand factor, type A 1959 67.04 0 2099036..2099833 - 265 121604878 - Pnap_1977 - CbbQ/NirQ/NorQ C-terminal domain-containing protein 1960 65.07 0 2099886..2101265 - 459 121604879 - Pnap_1978 - ribulose bisphosphate carboxylase 1961 64.27 0 2101392..2102309 - 305 121604880 - Pnap_1979 - LysR family transcriptional regulator 1962 68.24 +1 2102443..2103204 + 253 121604881 - Pnap_1980 - HAD family hydrolase 1963 68.21 +1 2103214..2103924 + 236 121604882 - Pnap_1981 - ribulose-phosphate 3-epimerase 1964 66.03 0 2103968..2105062 + 364 121604883 - Pnap_1982 - inositol phosphatase/fructose-1,6-bisphosphatase 1965 63.62 0 2105150..2106034 + 294 121604884 - Pnap_1983 - phosphoribulokinase 1966 68.35 +1 2106056..2108137 + 693 121604885 - Pnap_1984 - transketolase 1967 66.82 0 2108151..2108822 + 223 121604886 - Pnap_1985 - phosphoglycolate phosphatase 1968 63.42 0 2108893..2109909 + 338 121604887 - Pnap_1986 - glyceraldehyde-3-phosphate dehydrogenase, type I 1969 66.83 0 2109906..2111108 + 400 121604888 - Pnap_1987 - phosphoglycerate kinase 1970 64.80 0 2111190..2112206 + 338 121604889 - Pnap_1988 - fructose-1,6-bisphosphate aldolase 1971 60.14 0 2112300..2113694 - 464 121604890 - Pnap_1989 - integrase catalytic subunit 1972 53.65 -1 2113858..2114871 - 337 121604891 - Pnap_1990 - hypothetical protein 1973 58.77 0 2114995..2116071 + 358 121604892 - Pnap_1991 - phage integrase family protein 1974 50.11 -2 2116186..2117121 + 311 121604893 - Pnap_1992 - putative signal peptide protein 1975 54.61 -1 2117340..2119529 + 729 121604894 - Pnap_1993 - catalase 1976 57.07 -1 2119577..2120503 - 308 121604895 - Pnap_1994 - putative adenylate/guanylate cyclase 1977 54.09 -1 2120695..2121036 + 113 121604896 - Pnap_1995 - hypothetical protein 1978 56.77 -1 2121074..2122033 - 319 121604897 - Pnap_1996 - muramoyltetrapeptide carboxypeptidase 1979 60.19 0 2122054..2123289 - 411 121604898 - Pnap_1997 - CMP/dCMP deaminase, zinc-binding 1980 59.44 0 2123355..2123603 - 82 121604899 - Pnap_1998 - hypothetical protein 1981 63.26 0 2123759..2124169 + 136 121604900 - Pnap_1999 - hypothetical protein 1982 61.18 0 2124230..2125852 - 540 121604901 guaA Pnap_2000 - bifunctional GMP synthase/glutamine amidotransferase protein 1983 63.67 0 2125933..2127402 - 489 121604902 - Pnap_2001 - inosine-5'-monophosphate dehydrogenase 1984 59.26 0 2127467..2128087 + 206 121604903 - Pnap_2002 - hypothetical protein 1985 59.02 0 2128109..2128474 - 121 121604904 - Pnap_2003 - hypothetical protein 1986 53.69 -1 2128461..2128907 - 148 121604905 - Pnap_2004 - cyclase/dehydrase 1987 59.32 0 2128979..2129536 + 185 121604906 smpB Pnap_2005 - SsrA-binding protein 1988 62.85 0 2129568..2130695 - 375 121604907 - Pnap_2006 - enoyl-CoA hydratase 1989 64.73 0 2130692..2131567 - 291 121604908 - Pnap_2007 - hypothetical protein 1990 61.07 0 2131667..2133490 - 607 121604909 - Pnap_2008 - GTP-binding protein TypA 1991 62.16 0 2133526..2134569 - 347 121604910 - Pnap_2009 - tRNA pseudouridine synthase B 1992 59.62 0 2134657..2135025 - 122 121604911 - Pnap_2010 - ribosome-binding factor A 1993 61.20 0 2135105..2138083 - 992 121604912 - Pnap_2011 - translation initiation factor IF-2 1994 60.03 0 2138112..2139632 - 506 121604913 - Pnap_2012 - NusA antitermination factor 1995 59.77 0 2139655..2140263 - 202 121604914 - Pnap_2013 - hypothetical protein 1996 64.67 0 2140465..2142069 - 534 121604915 - Pnap_2014 - ABC transporter related 1997 62.22 0 2142066..2143121 - 351 121604916 - Pnap_2015 - binding-protein-dependent transport systems inner membrane component 1998 62.32 0 2143124..2144158 - 344 121604917 - Pnap_2016 - binding-protein-dependent transport systems inner membrane component 1999 62.75 0 2144171..2145985 - 604 121604918 - Pnap_2017 - extracellular solute-binding protein 2000 63.53 0 2146098..2146895 + 265 121604919 - Pnap_2018 - short-chain dehydrogenase/reductase SDR 2001 65.32 0 2146979..2147866 + 295 121604920 - Pnap_2019 - DNA ligase 2002 60.54 0 2147972..2150305 - 777 121604921 - Pnap_2020 - lysine decarboxylase 2003 65.50 0 2150579..2151007 + 142 121604922 - Pnap_2021 - hypothetical protein 2004 62.06 0 2151078..2151989 + 303 121604923 - Pnap_2022 - band 7 protein 2005 62.67 0 2152025..2152399 + 124 121604924 - Pnap_2023 - hypothetical protein 2006 43.30 -2 2152558..2152818 + 86 121604925 - Pnap_2024 - hypothetical protein 2007 66.37 0 2152815..2153819 - 334 121604926 - Pnap_2025 - aldo/keto reductase 2008 63.24 0 2153952..2154914 - 320 121604927 - Pnap_2026 - oxidoreductase domain-containing protein 2009 62.75 0 2154915..2155832 - 305 121604928 - Pnap_2027 - protocatechuate 4,5-dioxygenase subunit beta 2010 62.91 0 2155833..2156285 - 150 121604929 - Pnap_2028 - protocatechuate 4,5-dioxygenase subunit alpha 2011 64.86 0 2156289..2157227 - 312 121604930 - Pnap_2029 - amidohydrolase 2 2012 65.27 0 2157237..2158235 - 332 121604931 - Pnap_2030 - hypothetical protein 2013 64.35 0 2158269..2158958 - 229 121604932 - Pnap_2031 - hypothetical protein 2014 59.86 0 2158962..2159990 - 342 121604933 - Pnap_2032 - amidohydrolase 2 2015 67.35 0 2160000..2161169 - 389 121604934 - Pnap_2033 - hypothetical protein 2016 68.53 +1 2161304..2162215 + 303 121604935 - Pnap_2034 - LysR family transcriptional regulator 2017 63.21 0 2162616..2163020 + 134 121604936 - Pnap_2035 - hypothetical protein 2018 65.70 0 2163047..2163877 + 276 121604937 - Pnap_2036 - ModE family transcriptional regulator 2019 63.48 0 2163910..2164662 + 250 121604938 - Pnap_2037 - molybdenum ABC transporter, periplasmic molybdate-binding protein 2020 66.20 0 2164677..2165108 + 143 121604939 - Pnap_2038 - hypothetical protein 2021 70.36 +1 2165127..2165966 + 279 121604940 - Pnap_2039 - modD protein 2022 63.44 0 2166052..2166732 + 226 121604941 - Pnap_2040 - molybdate ABC transporter, inner membrane subunit 2023 68.25 +1 2166734..2167804 + 356 121604942 - Pnap_2041 - molybdate ABC transporter, ATPase subunit 2024 64.17 0 2167904..2168503 - 199 121604943 - Pnap_2042 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 2025 71.25 +1 2168976..2170808 - 610 121604944 - Pnap_2043 - hypothetical protein 2026 58.23 0 2171048..2171296 - 82 121604945 - Pnap_2044 - hypothetical protein 2027 65.38 0 2171388..2171699 - 103 121604946 - Pnap_2045 - Rieske (2Fe-2S) domain-containing protein 2028 72.37 +1 2171719..2173296 - 525 121604947 - Pnap_2046 - hypothetical protein 2029 56.59 -1 2173749..2174582 - 277 121604948 - Pnap_2047 - UBA/THIF-type NAD/FAD binding protein 2030 52.89 -1 2174666..2175427 - 253 121604949 - Pnap_2048 - TPR repeat-containing protein 2031 57.96 0 2175443..2175982 - 179 121604950 - Pnap_2049 - OmpA domain-containing protein 2032 57.67 0 2176027..2177316 - 429 121604951 - Pnap_2050 - TolB domain-containing protein 2033 52.43 -1 2177331..2178173 - 280 121604952 - Pnap_2051 - glycosyl transferase family protein 2034 52.47 -1 2178173..2178940 - 255 121604953 - Pnap_2052 - glycosyl transferase family protein 2035 58.54 0 2179137..2180354 + 405 121604954 - Pnap_2053 - O-antigen polymerase 2036 61.11 0 2180351..2182132 + 593 121604955 - Pnap_2054 - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 2037 60.83 0 2182134..2182733 - 199 121604956 - Pnap_2055 - hypothetical protein 2038 62.37 0 2183274..2184041 + 255 121604957 - Pnap_2056 - polar amino acid ABC transporter, inner membrane subunit 2039 62.30 0 2184019..2184750 + 243 121604958 - Pnap_2057 - ABC transporter related 2040 61.03 0 2184867..2185079 - 70 121604959 - Pnap_2058 - hypothetical protein 2041 64.74 0 2185082..2185444 - 120 121604960 - Pnap_2059 - translation initiation factor SUI1 2042 57.41 -1 2185487..2185918 - 143 121604961 - Pnap_2060 - hypothetical protein 2043 65.84 0 2186115..2188547 - 810 121604962 - Pnap_2061 - glycosyl transferase family protein 2044 65.11 0 2188620..2189198 - 192 121604963 - Pnap_2062 - hypothetical protein 2045 68.19 +1 2189265..2191829 + 854 121604964 - Pnap_2063 - hypothetical protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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