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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1879 69.85 +1 2017502..2017972 + 156 121604798 - Pnap_1896 - CHRD domain-containing protein 1880 65.07 0 2018240..2020624 + 794 121604799 - Pnap_1897 - radical SAM domain-containing protein 1881 62.45 0 2020730..2021227 - 165 121604800 - Pnap_1898 - hypothetical protein 1882 61.26 0 2021584..2023119 - 511 121604801 - Pnap_1899 - filamentation induced by cAMP protein Fic 1883 67.78 0 2023210..2024109 - 299 121604802 - Pnap_1900 - L-carnitine dehydratase/bile acid-inducible protein F 1884 63.12 0 2024260..2025444 - 394 121604803 - Pnap_1901 - 4-hydroxybenzoate 3-monooxygenase 1885 65.94 0 2025605..2026426 + 273 121604804 - Pnap_1902 - beta-ketoadipate pathway transcription regulator 1886 64.76 0 2026438..2027172 - 244 121604805 - Pnap_1903 - ABC transporter related 1887 62.61 0 2027169..2027933 - 254 121604806 - Pnap_1904 - ABC transporter related 1888 62.93 0 2027926..2028942 - 338 121604807 - Pnap_1905 - inner-membrane translocator 1889 63.31 0 2028939..2029802 - 287 121604808 - Pnap_1906 - inner-membrane translocator 1890 62.54 0 2029847..2031034 - 395 121604809 - Pnap_1907 - extracellular ligand-binding receptor 1891 59.39 0 2031195..2031689 - 164 121604810 - Pnap_1908 - flavodoxin/nitric oxide synthase 1892 65.88 0 2032271..2032780 - 169 121604811 - Pnap_1909 - ISSod10, transposase OrfB 1893 61.61 0 2032809..2033342 - 177 121604812 - Pnap_1910 - transposase and inactivated derivative 1894 63.41 0 2033448..2034707 - 419 121604813 - Pnap_1911 - acyl-CoA dehydrogenase domain-containing protein 1895 62.27 0 2034775..2035866 - 363 121604814 - Pnap_1912 - aminoglycoside phosphotransferase 1896 63.91 0 2035897..2036622 - 241 121604815 - Pnap_1913 - CRP/FNR family transcriptional regulator 1897 66.41 0 2036977..2037756 - 259 121604816 - Pnap_1914 - enoyl-CoA hydratase 1898 64.94 0 2037758..2039320 - 520 121604817 - Pnap_1915 - 3-hydroxybutyryl-CoA dehydrogenase 1899 62.40 0 2039336..2040343 - 335 121604818 - Pnap_1916 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1900 61.19 0 2040436..2040855 - 139 121604819 - Pnap_1917 - hypothetical protein 1901 60.43 0 2040992..2041696 - 234 121604820 - Pnap_1918 - LexA repressor 1902 60.77 0 2041822..2042787 + 321 121604821 - Pnap_1919 - asparaginase 1903 57.84 0 2042834..2043490 - 218 121604822 adk Pnap_1920 - adenylate kinase 1904 63.60 0 2043646..2044428 - 260 121604823 - Pnap_1921 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 1905 59.56 0 2044436..2044618 - 60 121604824 - Pnap_1922 - hypothetical protein 1906 63.57 0 2044599..2045630 - 343 121604825 - Pnap_1923 - tetraacyldisaccharide 4'-kinase 1907 60.23 0 2045673..2046107 - 144 121604826 - Pnap_1924 - biopolymer transport protein ExbD/TolR 1908 61.38 0 2046104..2046727 - 207 121604827 - Pnap_1925 - MotA/TolQ/ExbB proton channel 1909 64.70 0 2047068..2048387 + 439 121604828 - Pnap_1926 - exodeoxyribonuclease VII, large subunit 1910 57.04 -1 2048446..2049027 + 193 121604829 - Pnap_1927 - superoxide dismutase 1911 59.60 0 2049097..2049591 - 164 121604830 - Pnap_1928 - hypothetical protein 1912 60.46 0 2049705..2050010 - 101 121604831 - Pnap_1929 - TolA protein 1913 55.98 -1 2050235..2051488 + 417 121604832 - Pnap_1930 - isocitrate dehydrogenase 1914 56.44 -1 2051660..2051962 + 100 121604833 - Pnap_1931 - hypothetical protein 1915 61.65 0 2052100..2052498 + 132 121604834 - Pnap_1932 - RNP-1 like RNA-binding protein 1916 53.65 -1 2052978..2053415 + 145 121604835 - Pnap_1933 - ATP-dependent Clp protease adaptor protein ClpS 1917 61.15 0 2053496..2055832 + 778 121604836 - Pnap_1934 - ATP-dependent Clp protease, ATP-binding subunit clpA 1918 64.60 0 2056001..2057449 + 482 121604837 sbcB Pnap_1935 - exonuclease I 1919 67.51 0 2057497..2058675 - 392 121604838 - Pnap_1936 - saccharopine dehydrogenase 1920 66.44 0 2058816..2059247 + 143 121604839 - Pnap_1937 - AsnC family transcriptional regulator 1921 67.39 0 2059251..2059937 - 228 121604840 - Pnap_1938 - glutathione S-transferase domain-containing protein 1922 63.83 0 2059939..2060889 - 316 121604841 - Pnap_1939 - rhodanese domain-containing protein 1923 65.67 0 2061041..2062342 + 433 121604842 - Pnap_1940 - PHB depolymerase family esterase 1924 61.88 0 2062453..2062974 - 173 121604843 - Pnap_1941 - hypothetical protein 1925 65.94 0 2063159..2065495 + 778 121604844 - Pnap_1942 - RNA-binding S1 domain-containing protein 1926 67.11 0 2065635..2066771 - 378 121604845 - Pnap_1943 - iron-containing alcohol dehydrogenase 1927 67.18 0 2066942..2067907 + 321 121604846 - Pnap_1944 - alpha/beta hydrolase domain-containing protein 1928 60.69 0 2068883..2069836 - 317 121604847 - Pnap_1946 - glycine cleavage T protein (aminomethyl transferase) 1929 61.41 0 2069925..2070932 + 335 121604848 - Pnap_1947 - aminodeoxychorismate lyase 1930 67.18 0 2070935..2071717 + 260 121604849 - Pnap_1948 - dTMP kinase 1931 64.44 0 2071714..2072835 + 373 121604850 - Pnap_1949 - DNA-directed DNA polymerase 1932 54.07 -1 2072859..2073239 + 126 121604851 - Pnap_1950 - type IV pilus assembly PilZ 1933 53.01 -1 2073271..2074068 + 265 121604852 - Pnap_1951 - TatD family hydrolase 1934 53.72 -1 2074065..2074736 + 223 121604853 - Pnap_1952 - ankyrin 1935 62.60 0 2074750..2076126 - 458 121604854 - Pnap_1953 - PAS/PAC sensor signal transduction histidine kinase 1936 67.63 0 2076136..2077593 - 485 121604855 - Pnap_1954 - nickel-dependent hydrogenase, large subunit 1937 66.77 0 2077590..2078600 - 336 121604856 - Pnap_1955 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1938 66.87 0 2078603..2080063 - 486 121604857 - Pnap_1956 - two component, sigma54 specific, Fis family transcriptional regulator 1939 64.29 0 2080060..2081868 - 602 121604858 - Pnap_1957 - formyl transferase domain-containing protein 1940 61.42 0 2081865..2082398 - 177 121604859 - Pnap_1958 - hypothetical protein 1941 67.89 0 2082421..2083485 - 354 121604860 - Pnap_1959 - hydrogenase expression/formation protein HypE 1942 62.83 0 2083482..2084627 - 381 121604861 - Pnap_1960 - hydrogenase expression/formation protein HypD 1943 63.57 0 2084624..2084881 - 85 121604862 - Pnap_1961 - hydrogenase assembly chaperone hypC/hupF 1944 70.94 +1 2084872..2086089 - 405 121604863 - Pnap_1962 - hydrogenase maturation protein HypF 1945 66.46 0 2086095..2087081 - 328 121604864 - Pnap_1963 - hydrogenase accessory protein HypB 1946 66.67 0 2087094..2087441 - 115 121604865 - Pnap_1964 - hydrogenase expression/synthesis, HypA 1947 68.20 +1 2087434..2088606 - 390 121604866 - Pnap_1965 - hypothetical protein 1948 66.11 0 2088599..2089141 - 180 121604867 - Pnap_1966 - hypothetical protein 1949 68.72 +1 2089145..2089387 - 80 121604868 - Pnap_1967 - rubredoxin-type Fe(Cys)4 protein 1950 65.17 0 2089384..2090250 - 288 121604869 - Pnap_1968 - HupH hydrogenase expression protein 1951 68.43 +1 2090268..2090777 - 169 121604870 - Pnap_1969 - hydrogenase-1 expression HyaE 1952 63.91 0 2090800..2091126 - 108 121604871 - Pnap_1970 - hydrogenase assembly chaperone hypC/hupF 1953 65.33 0 2091134..2091805 - 223 121604872 - Pnap_1971 - hydrogenase expression/formation protein 1954 62.89 0 2091892..2092632 - 246 121604873 - Pnap_1972 - Ni/Fe-hydrogenase, b-type cytochrome subunit 1955 71.57 +1 2092648..2093238 - 196 121604874 - Pnap_1973 - HupE/UreJ protein 1956 63.49 0 2093280..2095136 - 618 121604875 - Pnap_1974 - nickel-dependent hydrogenase, large subunit 1957 64.02 0 2095169..2096263 - 364 121604876 - Pnap_1975 - hydrogenase (NiFe) small subunit HydA 1958 70.80 +1 2096724..2099024 - 766 121604877 - Pnap_1976 - von Willebrand factor, type A 1959 67.04 0 2099036..2099833 - 265 121604878 - Pnap_1977 - CbbQ/NirQ/NorQ C-terminal domain-containing protein 1960 65.07 0 2099886..2101265 - 459 121604879 - Pnap_1978 - ribulose bisphosphate carboxylase 1961 64.27 0 2101392..2102309 - 305 121604880 - Pnap_1979 - LysR family transcriptional regulator 1962 68.24 +1 2102443..2103204 + 253 121604881 - Pnap_1980 - HAD family hydrolase 1963 68.21 +1 2103214..2103924 + 236 121604882 - Pnap_1981 - ribulose-phosphate 3-epimerase 1964 66.03 0 2103968..2105062 + 364 121604883 - Pnap_1982 - inositol phosphatase/fructose-1,6-bisphosphatase 1965 63.62 0 2105150..2106034 + 294 121604884 - Pnap_1983 - phosphoribulokinase 1966 68.35 +1 2106056..2108137 + 693 121604885 - Pnap_1984 - transketolase 1967 66.82 0 2108151..2108822 + 223 121604886 - Pnap_1985 - phosphoglycolate phosphatase 1968 63.42 0 2108893..2109909 + 338 121604887 - Pnap_1986 - glyceraldehyde-3-phosphate dehydrogenase, type I 1969 66.83 0 2109906..2111108 + 400 121604888 - Pnap_1987 - phosphoglycerate kinase 1970 64.80 0 2111190..2112206 + 338 121604889 - Pnap_1988 - fructose-1,6-bisphosphate aldolase 1971 60.14 0 2112300..2113694 - 464 121604890 - Pnap_1989 - integrase catalytic subunit 1972 53.65 -1 2113858..2114871 - 337 121604891 - Pnap_1990 - hypothetical protein 1973 58.77 0 2114995..2116071 + 358 121604892 - Pnap_1991 - phage integrase family protein 1974 50.11 -2 2116186..2117121 + 311 121604893 - Pnap_1992 - putative signal peptide protein 1975 54.61 -1 2117340..2119529 + 729 121604894 - Pnap_1993 - catalase 1976 57.07 -1 2119577..2120503 - 308 121604895 - Pnap_1994 - putative adenylate/guanylate cyclase 1977 54.09 -1 2120695..2121036 + 113 121604896 - Pnap_1995 - hypothetical protein 1978 56.77 -1 2121074..2122033 - 319 121604897 - Pnap_1996 - muramoyltetrapeptide carboxypeptidase 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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