version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1840 57.72 0 1980352..1981614 + 420 121604759 - Pnap_1857 - dihydrolipoamide acetyltransferase 1841 57.28 -1 1981645..1983114 + 489 121604760 - Pnap_1858 - dihydrolipoamide dehydrogenase 1842 55.53 -1 1983134..1984237 + 367 121604761 - Pnap_1859 - AFG1 family ATPase 1843 58.10 0 1984462..1984881 + 139 121604762 - Pnap_1860 - hypothetical protein 1844 51.52 -2 1984891..1985649 - 252 121604763 - Pnap_1861 - protein phosphatase 2C domain-containing protein 1845 52.94 -1 1985730..1985933 + 67 121604764 - Pnap_1862 - hypothetical protein 1846 56.30 -1 1985933..1987939 + 668 121604765 - Pnap_1863 - helicase c2 1847 55.15 -1 1987902..1988726 - 274 121604766 - Pnap_1864 - putative transmembrane protein 1848 58.74 0 1988744..1989778 + 344 121604767 - Pnap_1865 - RluA family pseudouridine synthase 1849 56.31 -1 1989882..1990547 + 221 121604768 - Pnap_1866 - putative transcriptional regulator 1850 62.12 0 1990586..1992169 + 527 121604769 - Pnap_1867 - pseudouridine synthase 1851 56.34 -1 1992298..1992723 + 141 121604770 - Pnap_1868 - nucleoside-diphosphate kinase 1852 58.05 0 1992803..1993951 + 382 121604771 - Pnap_1869 - radical SAM protein 1853 57.62 0 1993948..1994754 + 268 121604772 - Pnap_1870 - type IV pilus biogenesis/stability protein PilW 1854 57.96 0 1994765..1995694 + 309 121604773 - Pnap_1871 - hypothetical protein 1855 61.49 0 1995694..1996968 + 424 121604774 ispG Pnap_1872 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1856 61.56 0 1996974..1998344 + 456 121604775 - Pnap_1873 - histidyl-tRNA synthetase 1857 58.44 0 1998413..1999105 + 230 121604776 - Pnap_1874 - hypothetical protein 1858 62.04 0 1999102..2000247 + 381 121604777 - Pnap_1875 - Pyrrolo-quinoline quinone 1859 58.82 0 2000282..2001619 + 445 121604778 - Pnap_1876 - small GTP-binding protein 1860 48.15 -2 2001676..2001945 + 89 121604779 - Pnap_1877 - RNA chaperone Hfq 1861 57.38 -1 2001963..2003114 + 383 121604780 - Pnap_1878 - GTP-binding protein, HSR1-related 1862 60.17 0 2003180..2004595 + 471 121604781 - Pnap_1879 - HflK protein 1863 57.56 0 2004608..2005507 + 299 121604782 - Pnap_1880 - HflC protein 1864 58.73 0 2005520..2005708 + 62 121604783 - Pnap_1881 - hypothetical protein 1865 64.96 0 2005860..2007029 + 389 121604784 - Pnap_1882 - tRNA synthetase, class II (G, H, P and S) 1866 65.47 0 2007118..2008458 + 446 121604785 - Pnap_1883 - adenylosuccinate synthetase 1867 60.57 0 2008536..2009060 + 174 121604786 - Pnap_1884 - phosphoribosyltransferase 1868 65.83 0 2009191..2010384 + 397 121604787 - Pnap_1885 - cystathionine beta-lyase 1869 57.14 -1 2010453..2010641 + 62 121604788 - Pnap_1886 - hypothetical protein 1870 63.83 0 2010785..2011843 - 352 121604789 - Pnap_1887 - tRNA 2-selenouridine synthase 1871 64.89 0 2011840..2012457 - 205 121604790 - Pnap_1888 - GDSL family lipase 1872 63.32 0 2012582..2013298 + 238 121604791 - Pnap_1889 - ABC transporter related 1873 66.14 0 2013429..2014190 + 253 121604792 - Pnap_1890 - RNA methyltransferase 1874 50.19 -2 2014293..2014553 - 86 121604793 - Pnap_1891 - hypothetical protein 1875 63.05 0 2014716..2015102 + 128 121604794 - Pnap_1892 - cytochrome c, class I 1876 61.77 0 2015120..2015446 - 108 121604795 - Pnap_1893 - hypothetical protein 1877 63.67 0 2015745..2016677 - 310 121604796 - Pnap_1894 - Ku domain-containing protein 1878 65.20 0 2016680..2017294 - 204 121604797 - Pnap_1895 - PfpI family intracellular peptidase 1879 69.85 +1 2017502..2017972 + 156 121604798 - Pnap_1896 - CHRD domain-containing protein 1880 65.07 0 2018240..2020624 + 794 121604799 - Pnap_1897 - radical SAM domain-containing protein 1881 62.45 0 2020730..2021227 - 165 121604800 - Pnap_1898 - hypothetical protein 1882 61.26 0 2021584..2023119 - 511 121604801 - Pnap_1899 - filamentation induced by cAMP protein Fic 1883 67.78 0 2023210..2024109 - 299 121604802 - Pnap_1900 - L-carnitine dehydratase/bile acid-inducible protein F 1884 63.12 0 2024260..2025444 - 394 121604803 - Pnap_1901 - 4-hydroxybenzoate 3-monooxygenase 1885 65.94 0 2025605..2026426 + 273 121604804 - Pnap_1902 - beta-ketoadipate pathway transcription regulator 1886 64.76 0 2026438..2027172 - 244 121604805 - Pnap_1903 - ABC transporter related 1887 62.61 0 2027169..2027933 - 254 121604806 - Pnap_1904 - ABC transporter related 1888 62.93 0 2027926..2028942 - 338 121604807 - Pnap_1905 - inner-membrane translocator 1889 63.31 0 2028939..2029802 - 287 121604808 - Pnap_1906 - inner-membrane translocator 1890 62.54 0 2029847..2031034 - 395 121604809 - Pnap_1907 - extracellular ligand-binding receptor 1891 59.39 0 2031195..2031689 - 164 121604810 - Pnap_1908 - flavodoxin/nitric oxide synthase 1892 65.88 0 2032271..2032780 - 169 121604811 - Pnap_1909 - ISSod10, transposase OrfB 1893 61.61 0 2032809..2033342 - 177 121604812 - Pnap_1910 - transposase and inactivated derivative 1894 63.41 0 2033448..2034707 - 419 121604813 - Pnap_1911 - acyl-CoA dehydrogenase domain-containing protein 1895 62.27 0 2034775..2035866 - 363 121604814 - Pnap_1912 - aminoglycoside phosphotransferase 1896 63.91 0 2035897..2036622 - 241 121604815 - Pnap_1913 - CRP/FNR family transcriptional regulator 1897 66.41 0 2036977..2037756 - 259 121604816 - Pnap_1914 - enoyl-CoA hydratase 1898 64.94 0 2037758..2039320 - 520 121604817 - Pnap_1915 - 3-hydroxybutyryl-CoA dehydrogenase 1899 62.40 0 2039336..2040343 - 335 121604818 - Pnap_1916 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1900 61.19 0 2040436..2040855 - 139 121604819 - Pnap_1917 - hypothetical protein 1901 60.43 0 2040992..2041696 - 234 121604820 - Pnap_1918 - LexA repressor 1902 60.77 0 2041822..2042787 + 321 121604821 - Pnap_1919 - asparaginase 1903 57.84 0 2042834..2043490 - 218 121604822 adk Pnap_1920 - adenylate kinase 1904 63.60 0 2043646..2044428 - 260 121604823 - Pnap_1921 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 1905 59.56 0 2044436..2044618 - 60 121604824 - Pnap_1922 - hypothetical protein 1906 63.57 0 2044599..2045630 - 343 121604825 - Pnap_1923 - tetraacyldisaccharide 4'-kinase 1907 60.23 0 2045673..2046107 - 144 121604826 - Pnap_1924 - biopolymer transport protein ExbD/TolR 1908 61.38 0 2046104..2046727 - 207 121604827 - Pnap_1925 - MotA/TolQ/ExbB proton channel 1909 64.70 0 2047068..2048387 + 439 121604828 - Pnap_1926 - exodeoxyribonuclease VII, large subunit 1910 57.04 -1 2048446..2049027 + 193 121604829 - Pnap_1927 - superoxide dismutase 1911 59.60 0 2049097..2049591 - 164 121604830 - Pnap_1928 - hypothetical protein 1912 60.46 0 2049705..2050010 - 101 121604831 - Pnap_1929 - TolA protein 1913 55.98 -1 2050235..2051488 + 417 121604832 - Pnap_1930 - isocitrate dehydrogenase 1914 56.44 -1 2051660..2051962 + 100 121604833 - Pnap_1931 - hypothetical protein 1915 61.65 0 2052100..2052498 + 132 121604834 - Pnap_1932 - RNP-1 like RNA-binding protein 1916 53.65 -1 2052978..2053415 + 145 121604835 - Pnap_1933 - ATP-dependent Clp protease adaptor protein ClpS 1917 61.15 0 2053496..2055832 + 778 121604836 - Pnap_1934 - ATP-dependent Clp protease, ATP-binding subunit clpA 1918 64.60 0 2056001..2057449 + 482 121604837 sbcB Pnap_1935 - exonuclease I 1919 67.51 0 2057497..2058675 - 392 121604838 - Pnap_1936 - saccharopine dehydrogenase 1920 66.44 0 2058816..2059247 + 143 121604839 - Pnap_1937 - AsnC family transcriptional regulator 1921 67.39 0 2059251..2059937 - 228 121604840 - Pnap_1938 - glutathione S-transferase domain-containing protein 1922 63.83 0 2059939..2060889 - 316 121604841 - Pnap_1939 - rhodanese domain-containing protein 1923 65.67 0 2061041..2062342 + 433 121604842 - Pnap_1940 - PHB depolymerase family esterase 1924 61.88 0 2062453..2062974 - 173 121604843 - Pnap_1941 - hypothetical protein 1925 65.94 0 2063159..2065495 + 778 121604844 - Pnap_1942 - RNA-binding S1 domain-containing protein 1926 67.11 0 2065635..2066771 - 378 121604845 - Pnap_1943 - iron-containing alcohol dehydrogenase 1927 67.18 0 2066942..2067907 + 321 121604846 - Pnap_1944 - alpha/beta hydrolase domain-containing protein 1928 60.69 0 2068883..2069836 - 317 121604847 - Pnap_1946 - glycine cleavage T protein (aminomethyl transferase) 1929 61.41 0 2069925..2070932 + 335 121604848 - Pnap_1947 - aminodeoxychorismate lyase 1930 67.18 0 2070935..2071717 + 260 121604849 - Pnap_1948 - dTMP kinase 1931 64.44 0 2071714..2072835 + 373 121604850 - Pnap_1949 - DNA-directed DNA polymerase 1932 54.07 -1 2072859..2073239 + 126 121604851 - Pnap_1950 - type IV pilus assembly PilZ 1933 53.01 -1 2073271..2074068 + 265 121604852 - Pnap_1951 - TatD family hydrolase 1934 53.72 -1 2074065..2074736 + 223 121604853 - Pnap_1952 - ankyrin 1935 62.60 0 2074750..2076126 - 458 121604854 - Pnap_1953 - PAS/PAC sensor signal transduction histidine kinase 1936 67.63 0 2076136..2077593 - 485 121604855 - Pnap_1954 - nickel-dependent hydrogenase, large subunit 1937 66.77 0 2077590..2078600 - 336 121604856 - Pnap_1955 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1938 66.87 0 2078603..2080063 - 486 121604857 - Pnap_1956 - two component, sigma54 specific, Fis family transcriptional regulator 1939 64.29 0 2080060..2081868 - 602 121604858 - Pnap_1957 - formyl transferase domain-containing protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.