version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1691 67.13 0 1810528..1811382 - 284 121604610 - Pnap_1705 - hypothetical protein 1692 69.53 +1 1811514..1812350 - 278 121604611 - Pnap_1706 - hypothetical protein 1693 63.64 0 1812389..1812718 - 109 121604612 - Pnap_1707 - hypothetical protein 1694 65.47 0 1812715..1813971 - 418 121604613 - Pnap_1708 - hypothetical protein 1695 64.25 0 1814007..1815704 + 565 121604614 - Pnap_1709 - NAD+ synthetase 1696 56.47 -1 1815733..1816134 + 133 121604615 - Pnap_1710 - nitrogen regulatory protein P-II 1697 63.07 0 1816141..1816752 - 203 121604616 - Pnap_1711 - hypothetical protein 1698 63.53 0 1816749..1817162 - 137 121604617 - Pnap_1712 - diacylglycerol kinase 1699 60.68 0 1817191..1817691 - 166 121604618 - Pnap_1713 - RDD domain-containing protein 1700 59.59 0 1817816..1818550 - 244 121604619 - Pnap_1714 - putative transmembrane protein 1701 56.38 -1 1818547..1818993 - 148 121604620 - Pnap_1715 - putative transmembrane protein 1702 52.56 -1 1818990..1819556 - 188 121604621 - Pnap_1716 - RNA polymerase factor sigma-70 1703 59.13 0 1819887..1821665 + 592 121604622 - Pnap_1717 - acetolactate synthase 3 catalytic subunit 1704 56.71 -1 1821774..1822265 + 163 121604623 ilvH Pnap_1718 - acetolactate synthase 3 regulatory subunit 1705 58.90 0 1822336..1823352 + 338 121604624 - Pnap_1719 - ketol-acid reductoisomerase 1706 56.46 -1 1823586..1824398 + 270 121604625 - Pnap_1720 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1707 56.21 -1 1824667..1826205 + 512 121604626 - Pnap_1721 - 2-isopropylmalate synthase 1708 54.85 -1 1826401..1827492 + 363 121604627 - Pnap_1722 - peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 1709 58.97 0 1827624..1828403 - 259 121604628 - Pnap_1723 - regulatory proteins, IclR 1710 58.79 0 1828494..1829255 - 253 121604629 - Pnap_1724 - arginyl-tRNA-protein transferase 1711 61.30 0 1829252..1830034 - 260 121604630 aat Pnap_1725 - leucyl/phenylalanyl-tRNA--protein transferase 1712 60.00 0 1830084..1830713 - 209 121604631 - Pnap_1726 - uracil phosphoribosyltransferase 1713 64.62 0 1830752..1832269 - 505 121604632 - Pnap_1727 - protein of unknown function DUF853, NPT hydrolase putative 1714 59.37 0 1832364..1833089 + 241 121604633 - Pnap_1728 - hypothetical protein 1715 62.57 0 1833128..1834420 + 430 121604634 - Pnap_1729 - phosphoribosylamine--glycine ligase 1716 57.90 0 1834430..1835353 + 307 121604635 - Pnap_1730 - coproporphyrinogen III oxidase 1717 57.24 -1 1835732..1836601 + 289 121604636 - Pnap_1732 - iojap-like protein 1718 59.40 0 1836598..1837065 + 155 121604637 - Pnap_1733 - hypothetical protein 1719 60.20 0 1837087..1837689 + 200 121604638 - Pnap_1734 - Maf-like protein 1720 53.13 -1 1837708..1839207 + 499 121604639 - Pnap_1735 - ribonuclease 1721 53.47 -1 1839227..1839976 + 249 121604640 - Pnap_1736 - polysaccharide deacetylase 1722 52.97 -1 1839973..1841184 + 403 121604641 - Pnap_1737 - glycosyl transferase, group 1 1723 60.20 0 1841281..1841481 + 66 121604642 - Pnap_1738 - hypothetical protein 1724 60.02 0 1841486..1842523 - 345 121604643 - Pnap_1739 - ISXo7 transposase 1725 55.35 -1 1842594..1843079 + 161 121604644 - Pnap_1740 - putative transposase 1726 63.62 0 1845660..1846151 + 163 121604645 - Pnap_1743 - transposase 1727 61.73 0 1846260..1847615 - 451 121604646 - Pnap_1744 - putative transposase 1728 59.35 0 1847696..1847941 + 81 121604647 - Pnap_1745 - transposase 1729 64.10 0 1847997..1848971 + 324 121604648 - Pnap_1746 - insertion element protein 1730 64.75 0 1855409..1856449 - 346 121604649 - Pnap_1747 - transposase IS116/IS110/IS902 family protein 1731 59.08 0 1856821..1857888 - 355 121604650 - Pnap_1748 - transposase IS116/IS110/IS902 family protein 1732 63.70 0 1858093..1859373 - 426 121604651 - Pnap_1749 - transposase, IS4 family protein 1733 57.74 0 1859498..1860886 + 462 121604652 - Pnap_1750 - integrase catalytic subunit 1734 59.74 0 1861100..1862182 + 360 121604653 - Pnap_1751 - transposase IS116/IS110/IS902 family protein 1735 63.53 0 1862292..1863629 - 445 121604654 - Pnap_1752 - hypothetical protein 1736 55.46 -1 1863929..1864276 - 115 121604655 - Pnap_1753 - ISCc1, transposase OrfB 1737 58.96 0 1864249..1864728 - 159 121604656 - Pnap_1754 - transposase 1738 56.29 -1 1864794..1865381 - 195 121604657 - Pnap_1755 - peptidoglycan-binding LysM 1739 64.44 0 1865432..1866691 - 419 121604658 - Pnap_1756 - D-amino-acid dehydrogenase 1740 65.41 0 1866807..1868159 - 450 121604659 - Pnap_1757 - amidase 1741 56.71 -1 1868306..1869058 + 250 121604660 - Pnap_1758 - ribosomal protein S2 1742 59.61 0 1869188..1870108 + 306 121604661 - Pnap_1759 - translation elongation factor Ts 1743 58.23 0 1870170..1870880 + 236 121604662 pyrH Pnap_1760 - uridylate kinase 1744 57.58 0 1870953..1871513 + 186 121604663 - Pnap_1761 - ribosome recycling factor 1745 57.68 0 1871542..1872264 + 240 121604664 - Pnap_1762 - undecaprenyl diphosphate synthase 1746 62.82 0 1872282..1873112 + 276 121604665 - Pnap_1763 - phosphatidate cytidylyltransferase 1747 61.03 0 1873138..1874325 + 395 121604666 - Pnap_1764 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1748 61.58 0 1874327..1875703 + 458 121604667 - Pnap_1765 - putative membrane-associated zinc metalloprotease 1749 56.84 -1 1875718..1878018 + 766 121604668 - Pnap_1766 - surface antigen (D15) 1750 55.23 -1 1878018..1878524 + 168 121604669 - Pnap_1767 - outer membrane chaperone Skp (OmpH) 1751 62.83 0 1878572..1879639 + 355 121604670 - Pnap_1768 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1752 56.01 -1 1879636..1880076 + 146 121604671 - Pnap_1769 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1753 63.47 0 1880088..1880900 + 270 121604672 - Pnap_1770 - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase 1754 61.82 0 1880908..1882104 + 398 121604673 - Pnap_1771 - lipid-A-disaccharide synthase 1755 62.52 0 1882076..1882702 + 208 121604674 - Pnap_1772 - ribonuclease H 1756 61.54 0 1882699..1883478 + 259 121604675 - Pnap_1773 - tRNA/rRNA methyltransferase (SpoU) 1757 60.83 0 1883634..1884815 + 393 121604676 - Pnap_1774 - carbamoyl phosphate synthase small subunit 1758 62.90 0 1884808..1888050 + 1080 121604677 - Pnap_1775 - carbamoyl-phosphate synthase, large subunit 1759 62.47 0 1888171..1888647 + 158 121604678 - Pnap_1776 - transcription elongation factor GreA 1760 63.72 0 1888647..1889087 + 146 121604679 - Pnap_1777 - putative transmembrane protein 1761 64.54 0 1889136..1889981 - 281 121604680 - Pnap_1778 - methenyltetrahydrofolate cyclohydrolase 1762 60.61 0 1890068..1890694 - 208 121604681 - Pnap_1779 - response regulator receiver protein 1763 62.89 0 1890741..1893311 - 856 121604682 - Pnap_1780 - multi-sensor signal transduction histidine kinase 1764 61.79 0 1893611..1896340 + 909 121604683 aceE Pnap_1781 - pyruvate dehydrogenase subunit E1 1765 64.03 0 1896383..1898089 + 568 121604684 - Pnap_1782 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1766 59.90 0 1898086..1898676 + 196 121604685 - Pnap_1783 - 20S proteasome, A and B subunits 1767 65.81 0 1898673..1900538 + 621 121604686 - Pnap_1784 - dihydrolipoamide dehydrogenase 1768 55.56 -1 1900715..1901245 - 176 121604687 - Pnap_1785 - hypothetical protein 1769 58.39 0 1901287..1901733 + 148 121604688 - Pnap_1786 - pyridine nucleotide-disulphide oxidoreductase dimerisation region 1770 56.98 -1 1901835..1902443 - 202 121604689 - Pnap_1787 - NLP/P60 protein 1771 63.69 0 1902654..1903829 + 391 121604690 - Pnap_1788 - glucose sorbosone dehydrogenase 1772 63.31 0 1903901..1904704 + 267 121604691 - Pnap_1789 - ABC-type transport system ipermease component 1773 65.89 0 1904723..1905754 + 343 121604692 - Pnap_1790 - hypothetical protein 1774 67.79 0 1905751..1906464 + 237 121604693 - Pnap_1791 - hypothetical protein 1775 64.69 0 1906461..1906763 + 100 121604694 - Pnap_1792 - hypothetical protein 1776 63.01 0 1906803..1907021 - 72 121604695 - Pnap_1793 - hypothetical protein 1777 64.76 0 1907260..1907784 + 174 121604696 - Pnap_1794 - hypothetical protein 1778 66.43 0 1907781..1909058 + 425 121604697 - Pnap_1795 - putative heat shock protein 1779 58.85 0 1909102..1909881 - 259 121604698 - Pnap_1796 - glutaredoxin family protein 1780 58.38 0 1910038..1910532 + 164 121604699 - Pnap_1797 - hypothetical protein 1781 59.42 0 1910653..1911135 + 160 121604700 - Pnap_1798 - hypothetical protein 1782 61.47 0 1911362..1911958 + 198 121604701 - Pnap_1799 - hypothetical protein 1783 64.90 0 1912039..1912662 + 207 121604702 - Pnap_1800 - isochorismatase hydrolase 1784 62.44 0 1912698..1913099 - 133 121604703 - Pnap_1801 - glyoxalase/bleomycin resistance protein/dioxygenase 1785 60.56 0 1913168..1913593 - 141 121604704 - Pnap_1802 - hypothetical protein 1786 65.16 0 1913691..1915421 - 576 121604705 - Pnap_1803 - ABC transporter 1787 64.21 0 1915717..1917630 + 637 121604706 - Pnap_1804 - propionyl-CoA synthetase 1788 64.51 0 1917738..1918247 - 169 121604707 - Pnap_1805 - ISSod10, transposase OrfB 1789 61.02 0 1918276..1918647 - 123 121604708 - Pnap_1806 - transposase and inactivated derivative 1790 63.98 0 1918679..1919200 - 173 121604709 - Pnap_1807 - hypothetical protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0