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Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 879 53.65 +1 1076278..1079004 + 908 34540759 ppdK PG1017 - pyruvate phosphate dikinase 880 41.42 -1 1079034..1079342 + 102 34540760 - PG1018 - hypothetical protein 881 48.22 0 1079355..1080536 + 393 34540761 - PG1019 - putative lipoprotein 882 49.63 0 1080708..1083518 + 936 34540762 - PG1020 - hypothetical protein 883 48.99 0 1083485..1083682 - 65 34540763 - PG1021 - hypothetical protein 884 52.36 0 1083677..1085158 + 493 34540764 - PG1022 - hypothetical protein 885 42.42 -1 1086838..1086936 + 32 34540765 - PG1024 - hypothetical protein 886 44.08 0 1087281..1088369 + 362 34540766 - PG1025 - hypothetical protein 887 41.80 -1 1088317..1089048 + 243 34540767 - PG1026 - hypothetical protein 888 45.27 0 1089287..1089529 - 80 34540768 - PG1027 - hypothetical protein 889 48.85 0 1089810..1091156 + 448 34540769 - PG1028 - TPR domain-containing protein 890 36.72 -2 1091220..1091396 + 58 34540770 - PG1029 - hypothetical protein 891 41.31 -1 1091540..1092880 + 446 34540771 - PG1030 - hypothetical protein 892 48.16 0 1093171..1094256 - 361 34540772 - PG1031 - ISPg1, transposase 893 40.75 -1 1094473..1095375 + 300 34540773 - PG1032 - ISPg3, transposase 894 46.85 0 1095538..1096284 + 248 34540774 - PG1033 - hypothetical protein 895 47.89 0 1096303..1097037 + 244 34540775 - PG1034 - ABC transporter, ATP-binding protein 896 48.56 0 1097015..1098505 + 496 34540776 - PG1035 - hypothetical protein 897 46.63 0 1098576..1101479 + 967 34540777 uvrA-1 PG1036 - excinuclease ABC, A subunit 898 47.10 0 1101505..1102884 + 459 34540778 - PG1037 - hypothetical protein 899 48.52 0 1102884..1105181 + 765 34540779 - PG1038 - ATP-dependent DNA helicase UvrD/PcrA/Rep family 900 47.51 0 1105415..1107142 - 575 34540780 - PG1039 - integral membrane protein 901 56.34 +1 1107575..1108039 - 154 34540781 - PG1040 - transcriptional regulator, putative 902 50.73 0 1108060..1109013 - 317 34540782 - PG1041 - K+-dependent Na+/Ca+ exchanger related-protein 903 54.83 +1 1109082..1110728 - 548 34540783 - PG1042 - glycogen synthase, putative 904 53.90 +1 1110765..1112942 - 725 34540784 feoB-1 PG1043 - ferrous iron transport protein B 905 53.38 0 1112976..1113908 - 310 34540785 - PG1044 - iron dependent repressor, putative 906 48.87 0 1115296..1116486 + 396 34540786 - PG1048 - N-acetylmuramoyl-L-alanine amidase 907 46.87 0 1116527..1117405 + 292 34540787 - PG1049 - hypothetical protein 908 48.38 0 1117412..1118308 + 298 34540788 - PG1050 - hypothetical protein 909 44.92 0 1118350..1119765 + 471 34540789 - PG1051 - hypothetical protein 910 48.18 0 1119830..1120186 + 118 34540790 - PG1052 - transcriptional regulator, putative 911 47.89 0 1120205..1120891 + 228 34540791 - PG1053 - transcriptional regulator, putative 912 44.05 0 1121292..1122737 - 481 34540792 tpr PG1055 - thiol protease 913 51.43 0 1123120..1123539 + 139 34540793 - PG1056 - hypothetical protein 914 49.16 0 1123559..1124152 + 197 34540794 - PG1057 - hypothetical protein 915 51.71 0 1124174..1126192 + 672 34540795 - PG1058 - OmpA family protein 916 49.00 0 1126286..1126585 - 99 34540796 - PG1059 - hypothetical protein 917 47.25 0 1126798..1128507 + 569 34540797 - PG1060 - carboxyl-terminal protease 918 43.16 -1 1128820..1129908 - 362 34540798 - PG1061 - ISPg6, transposase 919 45.58 0 1131196..1131636 + 146 34540799 - PG1063 - transcriptional regulator, putative 920 48.37 0 1131688..1132485 + 265 34540800 - PG1064 - dihydroorotate dehydrogenase, putative 921 46.75 0 1132467..1133390 + 307 34540801 pyrD PG1065 - dihydroorotate dehydrogenase 922 47.91 0 1133661..1134305 + 214 34540802 ctfA PG1066 - butyrate-acetoacetate CoA-transferase, subunit A 923 47.69 0 1134359..1134748 + 129 34540803 - PG1067 - hypothetical protein 924 47.93 0 1134776..1135597 + 273 34540804 - PG1068 - hypothetical protein 925 47.03 0 1135639..1136682 + 347 34540805 - PG1069 - alcohol dehydrogenase, zinc-containing, putative 926 46.92 0 1136769..1138019 + 416 34540806 kamA PG1070 - L-lysine 2,3-aminomutase 927 46.23 0 1138148..1139116 + 322 34540807 - PG1071 - hypothetical protein 928 43.82 -1 1139116..1140507 + 463 34540808 - PG1072 - MutS family protein 929 45.17 0 1140535..1142106 + 523 34540809 kamD PG1073 - D-lysine 5,6-aminomutase, alpha subunit 930 44.57 0 1142103..1142894 + 263 34540810 kamE PG1074 - D-lysine 5,6-aminomutase, beta subunit 931 46.76 0 1142918..1143580 + 220 34540811 - PG1075 - coenzyme A transferase, beta subunit 932 47.72 0 1143625..1144764 + 379 34540812 acdA PG1076 - acyl-CoA dehydrogenase, short-chain specific 933 49.36 0 1144779..1145564 + 261 34540813 etfB-2 PG1077 - electron transfer flavoprotein, beta subunit 934 50.99 0 1145578..1146585 + 335 34540814 etfA-2 PG1078 - electron transfer flavoprotein, alpha subunit 935 51.10 0 1146689..1147459 + 256 34540815 - PG1079 - enoyl-CoA hydratase/isomerase family protein 936 49.29 0 1147506..1148351 + 281 34540816 - PG1080 - 3-hydroxyacyl-CoA dehydrogenase family protein 937 47.54 0 1148521..1149717 - 398 34540817 ackA PG1081 - acetate kinase 938 49.65 0 1149763..1150773 - 336 34540818 pta PG1082 - phosphotransacetylase 939 42.89 -1 1150983..1151924 - 313 34540819 - PG1083 - hypothetical protein 940 44.85 0 1151972..1153048 - 358 34540820 - PG1084 - thioredoxin family protein 941 41.77 -1 1153343..1153591 + 82 34540821 - PG1085 - hypothetical protein 942 49.79 0 1153945..1154880 + 311 34540822 - PG1087 - radical SAM family protein 943 46.67 0 1154932..1155516 - 194 34540823 - PG1088 - acetyltransferase 944 43.50 -1 1155613..1156350 - 245 34540824 rprY PG1089 - DNA-binding response regulator RprY 945 51.61 0 1157157..1158152 + 331 34540825 - PG1091 - DHH subfamily 1 protein 946 47.32 0 1158261..1158839 + 192 34540826 - PG1093 - hypothetical protein 947 52.84 0 1158893..1160281 + 462 34540827 pgm PG1094 - phosphomannomutase 948 53.72 +1 1160365..1161762 + 465 34540828 - PG1095 - RNA methyltransferase 949 47.00 0 1161979..1163061 + 360 34540829 - PG1096 - hypothetical protein 950 47.49 0 1163097..1165568 + 823 34540830 - PG1097 - putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase 951 48.61 0 1165876..1167099 - 407 34540831 - PG1098 - hypothetical protein 952 55.27 +1 1167434..1168258 - 274 34540832 murQ PG1099 - N-acetylmuramic acid-6-phosphate etherase 953 52.82 0 1168251..1169102 - 283 34540833 - PG1100 - hypothetical protein 954 52.98 0 1169099..1170559 - 486 34540834 - PG1101 - sodium:solute symporter family protein 955 50.32 0 1170950..1173727 - 925 34540835 - PG1102 - hypothetical protein 956 53.33 0 1173745..1175049 + 434 34540836 - PG1103 - recombination factor protein RarA 957 53.12 0 1175075..1175842 + 255 34540837 - PG1104 - hypothetical protein 958 50.34 0 1175806..1177263 - 485 34540838 rpoN PG1105 - RNA polymerase sigma-54 factor 959 50.99 0 1177257..1178519 - 420 34540839 murF PG1106 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 960 29.57 -2 1178900..1180309 + 469 34540840 - PG1107 - hypothetical protein 961 40.30 -1 1180797..1181198 - 133 34540841 - PG1108 - hypothetical protein 962 53.29 0 1181515..1182882 - 455 34540842 - PG1109 - mobilization protein 963 48.92 0 1182881..1183297 + 138 34540843 - PG1110 - hypothetical protein 964 49.69 0 1185143..1185631 + 162 34540844 - PG1112 - hypothetical protein 965 53.51 0 1185613..1186836 - 407 34540845 - PG1113 - integrase 966 49.02 0 1187177..1187533 + 118 34540846 panD PG1114 - aspartate alpha-decarboxylase 967 53.14 0 1187610..1188947 + 445 34540847 ffh PG1115 - signal recognition particle protein 968 54.10 +1 1189071..1189961 + 296 34540848 folD PG1116 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 969 56.89 +1 1190150..1191601 + 483 34540849 - PG1117 - MATE efflux family protein 970 56.87 +1 1192173..1194764 - 863 34540850 clpB PG1118 - clpB protein 971 50.98 0 1194983..1195543 + 186 34540851 - PG1119 - flavodoxin, putative 972 48.16 0 1196236..1197645 - 469 34540852 asnC PG1121 - asparaginyl-tRNA synthetase 973 48.21 0 1199097..1200440 - 447 34540853 purB PG1123 - adenylosuccinate lyase 974 50.91 0 1200575..1201126 - 183 34540854 - PG1124 - ATP:cob(I)alamin adenosyltransferase, putative 975 50.08 0 1201161..1201817 - 218 34540855 - PG1125 - hypothetical protein 976 50.08 0 1201836..1203023 - 395 34540856 uraA PG1126 - uracil permease 977 48.29 0 1203363..1203830 + 155 34540857 - PG1127 - AsnC family transcriptional regulator 978 53.58 +1 1203877..1205259 + 460 34540858 xseA PG1128 - exodeoxyribonuclease VII large subunit 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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