version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 5 51.69 0 3887..5041 - 384 34539885 - PG0005 - hypothetical protein 6 51.84 0 5094..6422 - 442 34539886 - PG0006 - MATE efflux family protein 7 48.43 0 6845..7003 - 52 34539887 - PG0007 - hypothetical protein 8 49.73 0 7175..8113 - 312 34539888 - PG0008 - ISPg5 transposase Orf2 9 45.38 0 8167..8556 - 129 34539889 - PG0009 - ISPg5 transposase Orf1 10 55.08 +1 8915..11494 + 859 34539890 clpC PG0010 - ATP-dependent Clp protease, ATP-binding subunit ClpC 11 53.22 0 11634..14645 + 1003 34539891 - PG0011 - glycosy hydrolase family protein 12 49.27 0 14693..15721 + 342 34539892 - PG0012 - L-threonine-O-3-phosphate decarboxylase, putative 13 52.53 0 15731..16501 + 256 34539893 - PG0013 - hypothetical protein 14 53.04 0 17087..18436 + 449 34539894 - PG0016 - sigma-54 dependent DNA-binding response regulator 15 50.45 0 18447..19784 + 445 34539895 - PG0017 - sensor histidine kinase 16 49.35 0 19788..22034 + 748 34539896 - PG0018 - hypothetical protein 17 45.51 0 22180..23337 + 385 34539897 - PG0019 - ISPg4 transposase 18 50.35 0 23522..24226 + 234 34539898 - PG0020 - MarR family transcriptional regulator 19 52.99 0 24212..25213 - 333 34539899 - PG0021 - NifR3 family TIM-barrel protein 20 52.24 0 25210..26886 - 558 34539900 - PG0022 - sulfate permease family protein 21 53.88 +1 27872..28528 + 218 34539901 - PG0024 - redox-sensing transcriptional repressor Rex 22 53.64 +1 28597..29256 + 219 34539902 - PG0025 - fumarylacetoacetate hydrolase family protein 23 51.13 0 29374..32745 + 1123 34539903 - PG0026 - hypothetical protein 24 47.45 0 32821..33996 + 391 34539904 - PG0027 - hypothetical protein 25 50.31 0 34003..34491 + 162 34539905 ispF PG0028 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 26 56.18 +1 35986..36462 + 158 34539906 - PG0030 - cytidine deaminase 27 49.78 0 36995..37669 - 224 34539907 - PG0031 - hypothetical protein 28 54.02 +1 37717..40302 - 861 34539908 - PG0032 - beta-mannosidase, putative 29 53.43 0 40332..41630 - 432 34539909 - PG0033 - RmuC domain-containing protein 30 48.25 0 42325..42639 - 104 34539910 trx PG0034 - thioredoxin 31 49.28 0 42688..46374 - 1228 34539911 dnaE PG0035 - DNA polymerase III, alpha subunit 32 44.81 0 46659..47024 + 121 34539912 rplS PG0037 - 50S ribosomal protein L19 33 42.50 -1 47777..47896 + 39 34539913 - PG0039 - hypothetical protein 34 45.13 0 48074..48463 + 129 34539914 - PG0040 - ISPg5 transposase Orf1 35 50.27 0 48517..49455 + 312 34539915 - PG0041 - ISPg5 transposase Orf2 36 52.54 0 49769..51049 + 426 34539916 glyA PG0042 - serine hydroxymethyltransferase 37 50.81 0 51206..53539 + 777 34539917 nahA PG0043 - beta-hexosaminidase 38 51.82 0 54199..56253 + 684 34539918 htpG PG0045 - heat shock protein 90 39 51.11 0 56436..57290 - 284 34539919 cdsA PG0046 - phosphatidate cytidylyltransferase 40 51.83 0 57319..59340 - 673 34539920 - PG0047 - cell division protein FtsH, putative 41 49.73 0 59544..60647 - 367 34539921 - PG0048 - translation-associated GTPase 42 42.42 -1 60666..60830 - 54 34539922 - PG0049 - hypothetical protein 43 45.34 0 61056..62213 + 385 34539923 - PG0050 - ISPg4, transposase 44 49.83 0 63559..64746 + 395 34539924 - PG0052 - sensor histidine kinase 45 46.67 0 65057..65176 - 39 34539925 - PG0053 - hypothetical protein 46 49.74 0 65205..66959 + 584 34539926 recJ PG0054 - single-stranded-DNA-specific exonuclease RecJ 47 48.20 0 66956..68011 + 351 34539927 - PG0055 - hypothetical protein 48 42.15 -1 68142..69842 + 566 34539928 - PG0056 - hypothetical protein 49 48.27 0 69875..71059 + 394 34539929 pncB PG0057 - nicotinate phosphoribosyltransferase 50 50.00 0 71059..71652 + 197 34539930 nadD PG0058 - nicotinic acid mononucleotide adenylyltransferase 51 51.56 0 71666..72049 + 127 34539931 - PG0059 - hypothetical protein 52 45.36 0 72056..72238 + 60 34539932 - PG0060 - hypothetical protein 53 51.85 0 72285..73823 + 512 34539933 yngK-1 PG0061 - yngK protein 54 53.01 0 73828..75870 + 680 34539934 - PG0062 - TPR domain-containing protein 55 52.33 0 75968..77146 - 392 34539935 - PG0063 - outer membrane efflux protein 56 52.98 0 77164..80283 - 1039 34539936 - PG0064 - CzcA family heavy metal efflux protein 57 53.23 0 80303..81277 - 324 34539937 - PG0065 - RND family efflux transporter MFP subunit 58 45.14 0 81354..81641 - 95 34539938 - PG0066 - hypothetical protein 59 51.59 0 81888..82139 + 83 34539939 - PG0068 - hypothetical protein 60 53.86 +1 82511..84025 - 504 34539940 - PG0069 - hypothetical protein 61 49.69 0 84030..84824 - 264 34539941 lpxA PG0070 - UDP-N-acetylglucosamine acyltransferase 62 49.60 0 84821..86209 - 462 34539942 - PG0071 - bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 63 51.33 0 86188..87237 - 349 34539943 lpxD PG0072 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 64 50.30 0 87330..88160 - 276 34539944 - PG0073 - orotidine 5'-monophosphate decarboxylase 65 54.70 +1 88177..89262 - 361 34539945 prfA PG0074 - peptide chain release factor 1 66 54.19 +1 89287..90528 - 413 34539946 - PG0075 - phosphoribosylformylglycinamidine cyclo-ligase, putative 67 52.02 0 90482..91423 - 313 34539947 - PG0076 - N-acetylmuramoyl-L-alanine amidase 68 39.77 -1 91656..92354 - 232 34539948 - PG0078 - hypothetical protein 69 40.78 -1 92327..93628 - 433 34539949 - PG0079 - abortive infection protein, putative 70 42.42 -1 93659..93922 - 87 34539950 - PG0080 - hypothetical protein 71 53.95 +1 93945..96122 + 725 34539951 - PG0081 - hypothetical protein 72 51.50 0 96184..97086 + 300 34539952 - PG0082 - hypothetical protein 73 52.80 0 97092..97877 + 261 34539953 - PG0083 - hypothetical protein 74 55.67 +1 97972..99171 + 399 34539954 sda PG0084 - L-serine dehydratase, iron-sulfur-dependent, single chain form 75 52.49 0 99312..100616 + 434 34539955 - PG0085 - alpha-galactosidase 76 50.30 0 100635..102449 - 604 34539956 - PG0086 - DEAD-box ATP dependent DNA helicase 77 54.11 +1 102595..103215 - 206 34539957 - PG0087 - SIS domain-containing protein 78 50.66 0 103415..104632 + 405 34539958 - PG0088 - M16 family peptidase 79 51.67 0 105664..106143 + 159 34539959 - PG0090 - Dps family protein 80 52.55 0 106273..107490 - 405 34539960 - PG0091 - transporter, putative 81 52.98 0 107549..108688 - 379 34539961 - PG0092 - transporter, putative 82 56.33 +1 108733..109728 - 331 34539962 - PG0093 - HlyD family secretion protein 83 55.11 +1 109778..111283 - 501 34539963 - PG0094 - outer membrane efflux protein, putative 84 53.25 0 112178..114853 - 891 34539964 mutS PG0095 - DNA mismatch repair protein 85 50.21 0 115146..115874 - 242 161579534 - PG0097 - hypothetical protein 86 38.38 -2 115835..115933 - 32 34539966 - PG0098 - hypothetical protein 87 52.64 0 115917..118376 - 819 34539967 pheT PG0099 - phenylalanyl-tRNA synthetase subunit beta 88 45.24 0 119142..119309 - 55 34539968 - PG0100 - hypothetical protein 89 44.29 0 119338..119556 + 72 34539969 - PG0101 - hypothetical protein 90 44.65 0 121143..121301 + 52 34539970 - PG0102 - hypothetical protein 91 44.23 0 121430..121585 + 51 34539971 - PG0103 - hypothetical protein 92 52.51 0 125481..127508 + 675 34539972 topB-1 PG0104 - DNA topoisomerase III 93 37.03 -2 128858..129994 + 378 34539973 - PG0106 - glycosyl transferase, group 4 family protein 94 44.17 0 130241..131449 + 402 34539974 epsD PG0108 - UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 95 38.24 -2 131471..132694 + 407 34539975 - PG0109 - hypothetical protein 96 39.96 -1 132731..133771 + 346 34539976 - PG0110 - glycosyl transferase, group 1 family protein 97 37.75 -2 133820..135088 + 422 34539977 - PG0111 - capsular polysacharride biosynthesis gene, putative 98 42.42 -1 136065..136922 + 285 34539978 - PG0113 - hypothetical protein 99 47.89 0 136919..138058 + 379 34539979 - PG0114 - hypothetical protein 100 39.04 -2 138178..138615 + 145 34539980 - PG0115 - hexapeptide transferase family protein 101 46.08 0 138609..139832 + 407 34539981 - PG0116 - hypothetical protein 102 36.45 -2 139807..141345 + 512 34539982 - PG0117 - polysaccharide transport protein, putative 103 37.12 -2 141349..142404 + 351 34539983 - PG0118 - glycosyl transferase, group 2 family protein 104 45.64 0 142440..143138 + 232 34539984 - PG0119 - WecB/TagA/CpsF family glycosyl transferase 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.