version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 396 36.73 -2 499875..500168 + 97 34540276 - PG0457 - hypothetical protein 397 50.27 0 500615..501553 - 312 34540277 - PG0458 - ISPg5, transposase Orf2 398 47.62 0 501607..501984 - 125 34540278 - PG0459 - ISPg5, transposase Orf1 399 48.62 0 502077..503162 + 361 34540279 - PG0460 - ISPg1, transposase 400 44.65 0 503529..504836 - 435 34540280 - PG0461 - ISPg7, transposase 401 49.50 0 504966..506369 - 467 34540281 - PG0462 - transporter, putative 402 52.87 0 506407..507696 - 429 34540282 folC PG0463 - folylpolyglutamate synthase 403 52.99 0 507693..508964 - 423 34540283 purA PG0464 - adenylosuccinate synthetase 404 47.90 0 508993..509493 - 166 34540284 fur PG0465 - ferric uptake transcriptional regulator 405 50.00 0 509579..510334 - 251 34540285 - PG0466 - hypothetical protein 406 55.00 +1 510464..511474 - 336 34540286 manA PG0468 - mannose-6-phosphate isomerase, class I 407 51.19 0 511497..511748 - 83 34540287 - PG0469 - hypothetical protein 408 48.30 0 511827..511973 - 48 34540288 - PG0470 - hypothetical protein 409 53.90 +1 512428..513492 + 354 34540289 - PG0471 - hypothetical protein 410 55.22 +1 513479..514474 + 331 34540290 - PG0472 - iron-sulfur cluster binding protein, putative 411 53.37 0 515101..516138 - 345 34540291 - PG0474 - low-specificity L-threonine aldolase 412 52.52 0 516178..517308 - 376 34540292 - PG0475 - oxygen-independent coproporphyrinogen III oxidase, putative 413 54.84 +1 517305..518852 - 515 34540293 yngK-2 PG0476 - yngK protein 414 53.78 +1 518842..519687 - 281 34540294 panC PG0477 - pantoate--beta-alanine ligase 415 47.95 0 519826..520605 + 259 34540295 - PG0479 - hypothetical protein 416 48.18 0 520696..521409 - 237 34540296 - PG0480 - precorrin-2 C20-methyltransferase, putative 417 52.73 0 521522..522712 - 396 34540297 kbl PG0481 - 2-amino-3-ketobutyrate coenzyme A ligase 418 49.54 0 522788..523219 - 143 34540298 - PG0482 - hypothetical protein 419 54.52 +1 523326..523934 - 202 34540299 - PG0483 - kinase, putative 420 49.31 0 523941..524948 - 335 34540300 - PG0484 - hypothetical protein 421 49.85 0 525076..525414 - 112 34540301 yajC PG0485 - preprotein translocase, YajC subunit 422 51.52 0 525497..526024 - 175 34540302 ogt PG0486 - methylated-DNA--protein-cysteine S-methyltransferase 423 45.77 0 526366..527523 - 385 34540303 - PG0487 - ISPg4, transposase 424 55.81 +1 528309..529340 + 343 34540304 ruvB PG0488 - Holliday junction DNA helicase B 425 51.42 0 529387..530868 + 493 34540305 - PG0489 - polysaccharide biosynthesis-related protein 426 49.37 0 530968..532308 + 446 34540306 - PG0490 - hypothetical protein 427 51.80 0 532324..534462 + 712 34540307 - PG0491 - hypothetical protein 428 41.38 -1 534498..534758 - 86 34540308 - PG0492 - hypothetical protein 429 48.43 0 534832..534990 - 52 34540309 - PG0493 - hypothetical protein 430 41.76 -1 535184..535456 - 90 34540310 - PG0494 - hypothetical protein 431 42.41 -1 535587..536996 + 469 34540311 - PG0495 - hypothetical protein 432 43.01 -1 537308..537400 + 30 34540312 - PG0496 - hypothetical protein 433 52.84 0 537397..538083 + 228 34540313 mtn PG0497 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 434 51.25 0 538108..538587 + 159 34540314 luxS PG0498 - S-ribosylhomocysteinase 435 49.15 0 538849..539202 + 117 34540315 - PG0499 - hypothetical protein 436 54.73 +1 539337..540467 + 376 34540316 tgt PG0500 - queuine tRNA-ribosyltransferase 437 48.48 0 540484..541566 + 360 34540317 - PG0501 - hypothetical protein 438 47.19 0 541599..542060 + 153 34540318 smpB PG0502 - SsrA-binding protein 439 48.71 0 542100..544271 + 723 34540319 dpp PG0503 - dipeptidyl aminopeptidase IV 440 50.18 0 544374..545222 + 282 34540320 lipA PG0504 - lipoyl synthase 441 36.59 -2 545335..545457 + 40 34540321 - PG0505 - hypothetical protein 442 46.45 0 545475..547685 + 736 34540322 prtRII PG0506 - arginine-specific cysteine proteinase 443 46.67 0 548056..548250 + 64 34540323 - PG0507 - hypothetical protein 444 53.73 +1 548226..548828 - 200 34540324 - PG0508 - HAD family hydrolase 445 48.32 0 548818..549678 - 286 34540325 - PG0509 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 446 48.03 0 549695..550150 - 151 34540326 - PG0510 - hypothetical protein 447 49.07 0 550186..551418 - 410 34540327 - PG0511 - spore maturation protein A/spore maturation protein B 448 44.27 0 551438..552004 - 188 34540328 gmk PG0512 - guanylate kinase 449 43.66 -1 552037..552927 - 296 34540329 - PG0513 - hypothetical protein 450 46.92 0 553019..556360 - 1113 161579531 secA PG0514 - preprotein translocase subunit SecA 451 47.49 0 556453..558048 - 531 34540331 - PG0515 - hypothetical protein 452 45.59 0 558027..559274 - 415 34540332 - PG0516 - hypothetical protein 453 46.90 0 559305..562187 - 960 34540333 - PG0517 - hypothetical protein 454 46.28 0 562304..563029 - 241 34540334 - PG0518 - hypothetical protein 455 36.94 -2 563029..563139 + 36 34540335 - PG0519 - hypothetical protein 456 52.20 0 563708..565345 - 545 34540336 groEL PG0520 - chaperonin GroEL 457 47.78 0 565598..565867 - 89 34540337 groES PG0521 - co-chaperonin GroES 458 53.69 +1 566083..566991 - 302 34540338 miaA PG0522 - tRNA delta(2)-isopentenylpyrophosphate transferase 459 52.17 0 566988..568484 - 498 34540339 guaB PG0523 - inositol-5-monophosphate dehydrogenase 460 48.77 0 568739..569023 + 94 34540340 - PG0524 - hypothetical protein 461 51.79 0 569139..570758 + 539 34540341 pyrG PG0525 - CTP synthetase 462 49.73 0 570886..572769 + 627 34540342 - PG0526 - putative inner membrane protein translocase component YidC 463 49.89 0 572860..574743 + 627 34540343 - PG0528 - amidophosphoribosyltransferase, putative 464 49.44 0 574777..575850 + 357 34540344 carA PG0529 - carbamoyl phosphate synthase small subunit 465 49.47 0 575869..579096 + 1075 34540345 carB PG0530 - carbamoyl-phosphate synthase, large subunit 466 52.16 0 579286..581229 - 647 34540346 nadE PG0531 - NAD synthetase 467 52.00 0 581339..582238 - 299 34540347 - PG0532 - hypothetical protein 468 53.18 0 583382..585865 + 827 34540348 - PG0534 - hypothetical protein 469 47.02 0 586046..586666 - 206 34540349 - PG0535 - hypothetical protein 470 42.81 -1 586680..586985 + 101 34540350 - PG0536 - hypothetical protein 471 49.76 0 586994..588454 + 486 34540351 pepD-2 PG0537 - aminoacyl-histidine dipeptidase 472 50.54 0 589282..590670 + 462 34540352 - PG0538 - outer membrane efflux protein 473 51.09 0 590714..591766 + 350 34540353 - PG0539 - RND family efflux transporter MFP subunit 474 49.59 0 591763..594912 + 1049 34540354 - PG0540 - AcrB/AcrD/AcrF family protein 475 49.33 0 594897..595196 + 99 34540355 - PG0541 - hypothetical protein 476 43.46 -1 595467..595772 - 101 34540356 - PG0542 - hypothetical protein 477 39.22 -1 595797..596000 + 67 34540357 - PG0543 - transcriptional regulator, putative 478 46.64 0 596192..598138 + 648 34540358 - PG0544 - type I restriction-modification system, M subunit, putative 479 41.41 -1 598183..600288 + 701 34540359 - PG0545 - hypothetical protein 480 50.23 0 600269..600481 - 70 34540360 - PG0546 - hypothetical protein 481 48.04 0 600853..602049 + 398 34540361 - PG0547 - hypothetical protein 482 51.70 0 602238..605819 + 1193 34540362 - PG0548 - pyruvate ferredoxin/flavodoxin oxidoreductase family protein 483 48.62 0 606077..607162 - 361 34540363 - PG0549 - ISPg1, transposase 484 48.81 0 608457..611279 - 940 34540364 - PG0553 - extracellular protease, putative 485 43.59 -1 611605..611721 + 38 34540365 - PG0554 - hypothetical protein 486 55.68 +1 611806..612324 - 172 34540366 - PG0555 - histone-like family DNA-binding protein 487 31.23 -2 613418..614320 + 300 34540367 - PG0556 - hypothetical protein 488 40.98 -1 614375..615067 + 230 34540368 - PG0557 - hypothetical protein 489 49.88 0 615600..616421 - 273 34540369 - PG0558 - purine nucleoside phosphorylase 490 51.05 0 616441..617586 - 381 34540370 - PG0559 - chlorohydrolase family protein 491 47.97 0 617563..617808 + 81 34540371 - PG0560 - hypothetical protein 492 52.21 0 617790..619145 - 451 34540372 - PG0561 - M20/M25/M40 family peptidase 493 51.82 0 619362..621038 + 558 34540373 - PG0562 - hypothetical protein 494 39.29 -1 621025..621528 - 167 34540374 - PG0563 - hypothetical protein 495 43.08 -1 621506..621700 - 64 34540375 - PG0564 - hypothetical protein 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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