version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1810 57.72 +1 2217599..2219542 - 647 34541690 thiE PG2109 - thiamine-phosphate pyrophosphorylase 1811 57.31 +1 2219539..2221302 - 587 34541691 thiC PG2110 - thiamine biosynthesis protein ThiC 1812 57.71 +1 2221372..2221572 - 66 34541692 thiS PG2111 - thiS protein 1813 46.54 0 2221611..2222723 + 370 34541693 - PG2112 - hypothetical protein 1814 52.54 0 2224072..2224248 - 58 34541694 - PG2114 - hypothetical protein 1815 47.06 0 2224775..2224927 + 50 34541695 - PG2116 - hypothetical protein 1816 50.09 0 2225325..2225903 - 192 34541696 rpsP PG2117 - 30S ribosomal protein S16 1817 51.95 0 2226687..2227658 + 323 34541697 - PG2119 - Gfo/Idh/MocA family oxidoreductase 1818 49.88 0 2227773..2228582 - 269 34541698 - PG2120 - metallo-beta-lactamase superfamily protein 1819 49.81 0 2228635..2229714 - 359 34541699 ansA PG2121 - L-asparaginase 1820 41.39 -1 2230031..2230303 + 90 34541700 - PG2123 - hypothetical protein 1821 50.25 0 2230314..2231324 + 336 34541701 gapA PG2124 - glyceraldehyde 3-phosphate dehydrogenase, type I 1822 50.85 0 2231466..2232344 - 292 34541702 - PG2125 - AraC family transcriptional regulator 1823 53.33 0 2232528..2233202 - 224 34541703 - PG2126 - hypothetical protein 1824 49.77 0 2233199..2233642 - 147 34541704 - PG2127 - hypothetical protein 1825 49.73 0 2233957..2234895 - 312 34541705 - PG2128 - ISPg5, transposase Orf2 1826 45.38 0 2234949..2235338 - 129 34541706 - PG2129 - ISPg5, transposase Orf1 1827 50.52 0 2235707..2236288 + 193 34541707 - PG2130 - hypothetical protein 1828 52.41 0 2236314..2237786 + 490 34541708 - PG2131 - 60 kDa protein 1829 45.67 0 2237837..2239003 + 388 34541709 fimA PG2132 - fimbrilin 1830 50.88 0 2239142..2240053 + 303 34541710 - PG2133 - putative lipoprotein 1831 47.74 0 2240067..2241440 + 457 34541711 - PG2134 - putative lipoprotein 1832 43.37 -1 2241461..2243473 + 670 34541712 - PG2135 - putative lipoprotein 1833 45.53 0 2243500..2245164 + 554 34541713 - PG2136 - hypothetical protein 1834 45.42 0 2245788..2246267 + 159 34541714 - PG2139 - hypothetical protein 1835 47.31 0 2246274..2246459 + 61 34541715 rpmF PG2140 - 50S ribosomal protein L32 1836 49.21 0 2246639..2247646 + 335 34541716 fabH PG2141 - 3-oxoacyl-(acyl carrier protein) synthase III 1837 47.56 0 2247725..2248624 + 299 34541717 era PG2142 - GTP-binding protein Era 1838 49.01 0 2248687..2250000 + 437 34541718 engA PG2143 - GTP-binding protein EngA 1839 50.70 0 2250051..2253350 + 1099 34541719 - PG2144 - hypothetical protein 1840 53.14 0 2253393..2253998 + 201 34541720 - PG2145 - polysaccharide deacetylase 1841 51.06 0 2253955..2254710 + 251 34541721 - PG2146 - hypothetical protein 1842 47.59 0 2254909..2255490 - 193 34541722 xpt PG2147 - xanthine phosphoribosyltransferase 1843 51.12 0 2255527..2256864 - 445 34541723 - PG2148 - xanthine/uracil permease family protein 1844 52.70 0 2257026..2257748 - 240 34541724 - PG2149 - hypothetical protein 1845 52.12 0 2257757..2259262 - 501 34541725 - PG2150 - LysM domain-containing protein 1846 54.73 +1 2259890..2260375 + 161 34541726 - PG2152 - histone-like family DNA-binding protein 1847 45.16 0 2260850..2261035 - 61 34541727 - PG2154 - hypothetical protein 1848 50.06 0 2261062..2261952 - 296 34541728 - PG2155 - putative lipoprotein 1849 53.82 +1 2261989..2262735 - 248 34541729 - PG2156 - hypothetical protein 1850 54.19 +1 2263083..2264084 + 333 34541730 - PG2157 - glutamine cyclotransferase-related protein 1851 51.64 0 2264108..2264533 + 141 34541731 - PG2158 - hypothetical protein 1852 56.65 +1 2264537..2265934 + 465 34541732 - PG2159 - protoporphyrinogen oxidase 1853 49.33 0 2266807..2267706 - 299 34541733 - PG2161 - AraC family transcriptional regulator 1854 52.52 0 2267703..2268854 - 383 34541734 lpxB PG2162 - lipid A disaccharide synthase 1855 52.79 0 2268891..2269661 - 256 34541735 surE PG2163 - stationary phase survival protein SurE 1856 46.59 0 2269658..2270215 - 185 34541736 - PG2164 - peptidyl-prolyl cis-trans isomerase, FKBP-type 1857 50.58 0 2270212..2271759 - 515 34541737 glyS PG2165 - glycyl-tRNA synthetase 1858 38.74 -2 2271949..2272059 + 36 34541738 - PG2166 - hypothetical protein 1859 45.07 0 2272194..2273633 - 479 34541739 - PG2167 - immunoreactive 53 kDa antigen PG123 1860 45.61 0 2273678..2274247 - 189 34541740 - PG2168 - hypothetical protein 1861 47.67 0 2276775..2278064 - 429 34541741 - PG2170 - sugar transporter 1862 50.83 0 2278103..2279062 - 319 34541742 - PG2171 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1863 45.65 0 2279281..2280027 - 248 34541743 - PG2172 - hypothetical protein 1864 47.08 0 2280031..2280903 - 290 34541744 omp28 PG2173 - outer membrane lipoprotein Omp28 1865 50.00 0 2280923..2282668 - 581 34541745 - PG2174 - hypothetical protein 1866 47.20 0 2282724..2283206 - 160 34541746 - PG2175 - hypothetical protein 1867 41.82 -1 2283305..2284435 - 376 34541747 - PG2176 - ISPg2, transposase 1868 48.26 0 2285356..2286594 - 412 34541748 nqrF PG2177 - Na(+)-translocating NADH-quinone reductase subunit F 1869 49.76 0 2286613..2287227 - 204 34541749 nqrE PG2178 - Na(+)-translocating NADH-quinone reductase subunit E 1870 49.05 0 2287267..2287896 - 209 34541750 nqrD PG2179 - Na(+)-translocating NADH-quinone reductase subunit D 1871 48.71 0 2287902..2288636 - 244 34541751 nqrC PG2180 - Na(+)-translocating NADH-quinone reductase subunit C 1872 53.33 0 2288660..2289859 - 399 34541752 nqrB PG2181 - Na(+)-translocating NADH-quinone reductase subunit B 1873 52.58 0 2289890..2291245 - 451 34541753 nqrA PG2182 - Na(+)-translocating NADH-quinone reductase subunit A 1874 51.33 0 2292023..2293339 - 438 34541754 - PG2185 - transporter, putative 1875 47.92 0 2293374..2293709 - 111 34541755 - PG2186 - transcriptional regulator, putative 1876 51.35 0 2293846..2294733 - 295 34541756 menA PG2187 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1877 51.78 0 2294723..2295871 - 382 34541757 lysA PG2188 - diaminopimelate decarboxylase 1878 50.26 0 2295901..2297241 - 446 34541758 lysC PG2189 - aspartate kinase 1879 51.01 0 2297259..2297999 - 246 34541759 ftsE PG2190 - cell-division ATP-binding protein 1880 47.73 0 2298381..2299394 + 337 34541760 - PG2192 - M24/M37 family peptidase 1881 45.25 0 2301052..2302209 - 385 34541761 - PG2194 - ISPg4, transposase 1882 49.25 0 2302745..2303542 + 265 34541762 - PG2197 - hypothetical protein 1883 53.41 0 2304876..2306813 - 645 34541763 - PG2199 - ABC transporter, ATP-binding protein, putative 1884 54.98 +1 2306810..2308897 - 695 34541764 - PG2200 - TPR domain-containing protein 1885 52.81 0 2308933..2309502 - 189 34541765 def PG2201 - peptide deformylase 1886 56.35 +1 2309607..2310023 - 138 34541766 - PG2202 - Holliday junction resolvase-like protein 1887 53.78 +1 2310521..2316247 + 1908 34541767 - PG2204 - hypothetical protein 1888 53.65 +1 2316261..2317205 + 314 34541768 panE PG2205 - 2-dehydropantoate 2-reductase 1889 51.52 0 2317340..2318956 - 538 34541769 - PG2206 - ABC transporter, ATP-binding protein 1890 51.76 0 2319232..2320251 - 339 34541770 - PG2207 - hypothetical protein 1891 47.45 0 2320422..2320676 - 84 34541771 - PG2208 - hypothetical protein 1892 50.20 0 2320764..2321018 - 84 34541772 - PG2209 - hypothetical protein 1893 54.32 +1 2321042..2323900 - 952 34541773 uvrA-2 PG2210 - excinuclease ABC, A subunit 1894 43.16 -1 2324573..2324857 - 94 34541774 - PG2212 - hypothetical protein 1895 40.98 -1 2324938..2325120 - 60 34541775 - PG2213 - nitrite reductase-related protein 1896 55.06 +1 2325391..2326665 - 424 34541776 - PG2214 - hypothetical protein 1897 53.31 0 2326700..2327785 - 361 34541777 manC PG2215 - mannose-1-phosphate guanylyltransferase 1898 49.97 0 2327860..2329590 + 576 34541778 - PG2216 - hypothetical protein 1899 53.96 +1 2329763..2331667 + 634 34541779 dxs PG2217 - 1-deoxy-D-xylulose-5-phosphate synthase 1900 52.95 0 2331720..2333060 + 446 34541780 trkA PG2218 - potassium transporter peripheral membrane component 1901 51.84 0 2333087..2334550 + 487 34541781 trkH PG2219 - potassium uptake protein TrkH 1902 48.87 0 2335075..2335428 + 117 34541782 - PG2220 - hypothetical protein 1903 54.08 +1 2335566..2336900 + 444 34541783 - PG2221 - MiaB-like tRNA modifying enzyme 1904 52.18 0 2336897..2337814 + 305 34541784 - PG2222 - acyltransferase 1905 53.87 +1 2337853..2338821 + 322 34541785 - PG2223 - glycosyl transferase, group 2 family protein 1906 48.39 0 2339003..2339560 + 185 34541786 - PG2224 - hypothetical protein 1907 54.81 +1 2339580..2339849 + 89 34541787 - PG2225 - hypothetical protein 1908 53.35 0 2339929..2342151 + 740 34541788 - PG2226 - hypothetical protein 1909 57.84 +1 2342148..2342804 + 218 34541789 - PG2227 - hypothetical protein 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0