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Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1705 55.06 +1 2081550..2083427 + 625 34541585 gidA PG1992 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1706 49.67 0 2083461..2085260 + 599 34541586 uvrC PG1993 - excinuclease ABC, C subunit 1707 49.45 0 2085267..2085719 + 150 34541587 dtd PG1994 - D-tyrosyl-tRNA deacylase 1708 45.58 0 2085724..2086074 + 116 34541588 - PG1995 - hypothetical protein 1709 50.23 0 2086061..2086930 + 289 34541589 deoC PG1996 - deoxyribose-phosphate aldolase 1710 50.00 0 2086971..2087132 + 53 34541590 - PG1997 - hypothetical protein 1711 49.60 0 2087241..2088119 - 292 34541591 - PG1998 - polyprenyl synthetase 1712 46.95 0 2088273..2088911 - 212 34541592 - PG1999 - hypothetical protein 1713 50.72 0 2088932..2089558 - 208 34541593 - PG2000 - signal peptidase-related protein 1714 49.57 0 2089548..2090945 - 465 34541594 lepB PG2001 - signal peptidase I 1715 54.39 +1 2090961..2091677 - 238 34541595 dapB PG2002 - dihydrodipicolinate reductase 1716 53.65 +1 2091738..2093081 - 447 34541596 dgt PG2003 - deoxyguanosinetriphosphate triphosphohydrolase 1717 51.06 0 2093225..2094217 - 330 34541597 - PG2004 - hypothetical protein 1718 48.06 0 2094727..2095086 + 119 34541598 - PG2006 - hypothetical protein 1719 49.32 0 2095383..2097884 + 833 34541599 - PG2008 - TonB-dependent receptor, putative 1720 44.58 0 2098454..2099191 + 245 34541600 - PG2009 - DNA repair protein RecO, putative 1721 47.91 0 2099360..2101012 + 550 34541601 - PG2010 - phosphomannomutase, putative 1722 37.12 -2 2104316..2104579 - 87 34541602 cas2-2 PG2013 - CRISPR-associated Cas2 family protein 1723 42.97 -1 2104579..2105595 - 338 34541603 cas1 PG2014 - CRISPR-associated Cas1 family protein 1724 43.66 -1 2105592..2106104 - 170 34541604 cas4 PG2015 - CRISPR-associated Cas4 family protein 1725 38.38 -2 2106124..2108460 - 778 34541605 cas3 PG2016 - CRISPR-associated helicase Cas3 1726 39.82 -1 2108435..2109451 - 338 34541606 - PG2017 - hypothetical protein 1727 36.73 -2 2109462..2110961 - 499 34541607 - PG2018 - hypothetical protein 1728 37.23 -2 2110958..2111752 - 264 34541608 - PG2019 - hypothetical protein 1729 49.25 0 2111698..2112363 - 221 34541609 - PG2020 - CRISPR-associated Cas5e family protein 1730 49.59 0 2113011..2114942 - 643 34541610 - PG2021 - hypothetical protein 1731 50.90 0 2114946..2117489 - 847 34541611 - PG2022 - hypothetical protein 1732 50.10 0 2117655..2118626 - 323 34541612 fmt PG2023 - methionyl-tRNA formyltransferase 1733 47.63 0 2119173..2124293 - 1706 34541613 hagE PG2024 - hemagglutinin protein HagE 1734 56.37 +1 2125072..2125605 + 177 34541614 - PG2026 - phosphoglycerate mutase family protein 1735 50.67 0 2125634..2126158 + 174 34541615 - PG2027 - hypothetical protein 1736 54.51 +1 2126167..2126676 + 169 34541616 - PG2028 - ebsC protein 1737 54.22 +1 2126683..2129262 + 859 34541617 - PG2029 - hypothetical protein 1738 51.55 0 2129887..2130468 + 193 34541618 - PG2030 - hypothetical protein 1739 48.12 0 2130479..2130931 + 150 34541619 - PG2031 - hypothetical protein 1740 52.63 0 2130958..2133471 - 837 34541620 priA PG2032 - primosomal protein N' 1741 53.56 +1 2133505..2134893 - 462 34541621 gltD PG2033 - glutamate synthase, small subunit 1742 49.87 0 2135000..2135791 - 263 34541622 - PG2034 - ferredoxin--NADP(+) reductase subunit alpha 1743 52.21 0 2135992..2136669 + 225 34541623 trmD PG2035 - tRNA (guanine-N(1)-)-methyltransferase 1744 52.52 0 2136701..2137612 + 303 34541624 - PG2036 - ion transporter 1745 52.25 0 2137681..2137902 - 73 34541625 - PG2037 - hypothetical protein 1746 56.14 +1 2137899..2138297 - 132 34541626 - PG2038 - N-acetylmuramoyl-L-alanine amidase, putative 1747 53.46 0 2138488..2138964 - 158 34541627 - PG2040 - histone-like family DNA-binding protein 1748 48.36 0 2139325..2140056 - 243 34541628 - PG2041 - hypothetical protein 1749 40.26 -1 2140189..2141199 - 336 34541629 - PG2042 - thioredoxin family protein 1750 58.08 +1 2142358..2143452 + 364 34541630 - PG2043 - hypothetical protein 1751 49.74 0 2143470..2144225 + 251 34541631 - PG2044 - hypothetical protein 1752 54.14 +1 2144489..2145853 + 454 34541632 - PG2046 - hypothetical protein 1753 51.71 0 2145848..2148133 - 761 34541633 - PG2047 - helicase, putative 1754 49.08 0 2148224..2148604 - 126 34541634 - PG2048 - hypothetical protein 1755 44.97 0 2148617..2148994 - 125 34541635 - PG2049 - hypothetical protein 1756 47.10 0 2149249..2149524 - 91 34541636 - PG2050 - hypothetical protein 1757 49.43 0 2149776..2150645 + 289 34541637 dapA PG2052 - dihydrodipicolinate synthase 1758 47.55 0 2150674..2151327 + 217 34541638 bioD PG2053 - dithiobiotin synthetase 1759 53.27 0 2151433..2152104 - 223 34541639 - PG2054 - lipoprotein PG3 1760 49.85 0 2152170..2153150 - 326 34541640 - PG2055 - dihydroorotate dehydrogenase 2 1761 50.48 0 2155099..2156037 - 312 34541641 - PG2057 - ISPg5, transposase Orf2 1762 45.38 0 2156091..2156480 - 129 34541642 - PG2058 - ISPg5, transposase Orf1 1763 53.36 0 2157713..2158516 + 267 34541643 thyA PG2060 - thymidylate synthase 1764 52.97 0 2158562..2159050 + 162 34541644 folA PG2061 - dihydrofolate reductase 1765 53.63 +1 2159111..2160475 + 454 34541645 hisS PG2062 - histidyl-tRNA synthetase 1766 49.76 0 2160480..2160686 - 68 34541646 - PG2063 - hypothetical protein 1767 46.91 0 2160690..2161094 + 134 34541647 - PG2064 - hypothetical protein 1768 55.36 +1 2161140..2162165 + 341 34541648 - PG2065 - hypothetical protein 1769 53.12 0 2162256..2163311 + 351 34541649 - PG2066 - putative lipoprotein 1770 54.28 +1 2163355..2164452 + 365 34541650 pdxA PG2067 - pyridoxal phosphate biosynthetic protein PdxA 1771 48.15 0 2164474..2164932 + 152 34541651 tagD PG2068 - glycerol-3-phosphate cytidylyltransferase 1772 53.55 0 2164938..2165669 + 243 34541652 - PG2069 - short chain dehydrogenase/reductase family oxidoreductase 1773 49.84 0 2165681..2166607 + 308 34541653 - PG2070 - hypothetical protein 1774 53.21 0 2166577..2167512 + 311 34541654 - PG2071 - hypothetical protein 1775 51.01 0 2167509..2170817 + 1102 34541655 - PG2072 - UvrD/REP helicase domain-containing protein 1776 44.23 0 2174309..2174464 - 51 34541656 - PG2073 - hypothetical protein 1777 44.65 0 2174593..2174751 - 52 34541657 - PG2074 - hypothetical protein 1778 43.84 -1 2176338..2176556 - 72 34541658 - PG2075 - hypothetical protein 1779 44.99 0 2176585..2177133 + 182 34541659 - PG2076 - hypothetical protein 1780 50.65 0 2177095..2177481 - 128 34541660 - PG2077 - hypothetical protein 1781 50.98 0 2177518..2178690 - 390 34541661 - PG2078 - hypothetical protein 1782 53.46 0 2178980..2179456 - 158 34541662 - PG2079 - hypothetical protein 1783 57.76 +1 2179468..2180769 - 433 34541663 bioA PG2080 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1784 54.18 +1 2180759..2181751 - 330 34541664 bioB PG2081 - biotin synthetase 1785 44.62 0 2181933..2183474 - 513 34541665 - PG2082 - POT family protein 1786 50.36 0 2183500..2184597 - 365 34541666 - PG2083 - hypothetical protein 1787 49.09 0 2185672..2186655 + 327 34541667 trpS PG2085 - tryptophanyl-tRNA synthetase 1788 53.10 0 2186711..2187130 + 139 34541668 - PG2086 - hypothetical protein 1789 49.58 0 2187130..2187603 + 157 34541669 - PG2087 - SPOUT methyltransferase superfamily protein 1790 47.12 0 2187665..2188723 + 352 34541670 msrA PG2088 - bifunctional methionine sulfoxide reductase A/B protein 1791 48.35 0 2188780..2189964 + 394 34541671 - PG2089 - hypothetical protein 1792 48.95 0 2190370..2191278 + 302 34541672 - PG2090 - cation efflux family protein 1793 50.00 0 2191317..2191670 + 117 34541673 folB PG2091 - dihydroneopterin aldolase 1794 48.17 0 2191741..2193000 - 419 34541674 - PG2092 - hypothetical protein 1795 52.77 0 2193411..2197958 - 1515 34541675 - PG2094 - hypothetical protein 1796 50.82 0 2198380..2200707 - 775 34541676 - PG2095 - putative lipoprotein 1797 50.93 0 2200715..2205505 - 1596 34541677 - PG2096 - hypothetical protein 1798 51.80 0 2205611..2206552 - 313 34541678 prsA PG2097 - ribose-phosphate pyrophosphokinase 1799 45.76 0 2206549..2206725 - 58 34541679 - PG2098 - hypothetical protein 1800 56.07 +1 2206739..2208022 - 427 34541680 - PG2099 - DEAD-box ATP dependent DNA helicase 1801 43.24 -1 2208617..2210281 - 554 34541681 - PG2100 - immunoreactive 63 kDa antigen PG102 1802 51.71 0 2210368..2211363 - 331 34541682 - PG2101 - hypothetical protein 1803 46.58 0 2211514..2213136 - 540 34541683 - PG2102 - immunoreactive 61 kDa antigen PG91 1804 48.15 0 2213316..2213450 - 44 34541684 - PG2103 - hypothetical protein 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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