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Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1620 40.24 -1 1992417..1992995 + 192 34541500 - PG1894 - hypothetical protein 1621 31.62 -2 1993602..1994300 + 232 34541501 - PG1895 - hypothetical protein 1622 53.26 0 1994726..1996015 + 429 34541502 metK PG1896 - S-adenosylmethionine synthetase 1623 51.47 0 1996143..1996820 - 225 34541503 - PG1897 - thiamin pyrophosphokinase catalytic subunit 1624 52.55 0 1996817..1997425 - 202 34541504 - PG1898 - transporter, putative 1625 51.99 0 1997430..1999814 - 794 34541505 - PG1899 - TonB-dependent receptor, putative 1626 53.69 +1 1999889..2000836 - 315 34541506 - PG1900 - ribosome-associated GTPase 1627 52.58 0 2000921..2001481 - 186 161579528 frr PG1901 - ribosome recycling factor 1628 52.92 0 2001518..2002237 - 239 34541508 pyrH PG1902 - uridylate kinase 1629 52.06 0 2002320..2004311 - 663 34541509 - PG1903 - hypothetical protein 1630 44.24 0 2004522..2004851 - 109 34541510 - PG1904 - hypothetical protein 1631 48.16 0 2005547..2006632 + 361 34541511 - PG1906 - ISPg1, transposase 1632 34.16 -2 2007935..2008780 + 281 34541512 - PG1908 - hypothetical protein 1633 45.55 0 2010372..2010854 - 160 34541513 rplQ PG1910 - 50S ribosomal protein L17 1634 43.10 -1 2010860..2011852 - 330 34541514 rpoA PG1911 - DNA-directed RNA polymerase subunit alpha 1635 46.04 0 2011865..2012470 - 201 34541515 rpsD PG1912 - 30S ribosomal protein S4 1636 44.70 0 2012630..2013016 - 128 34541516 rpsK PG1913 - 30S ribosomal protein S11 1637 45.14 0 2013028..2013408 - 126 34541517 rpsM PG1914 - 30S ribosomal protein S13 1638 39.32 -1 2013441..2013557 - 38 34541518 rpmJ PG1915 - 50S ribosomal protein L36 1639 40.18 -1 2013574..2013792 - 72 34541519 infA PG1916 - translation initiation factor IF-1 1640 45.17 0 2013795..2014580 - 261 34541520 map PG1917 - methionine aminopeptidase, type I 1641 44.44 0 2014580..2015920 - 446 34541521 secY PG1918 - preprotein translocase subunit SecY 1642 43.85 -1 2015925..2016371 - 148 34541522 rplO PG1919 - 50S ribosomal protein L15 1643 37.85 -2 2016397..2016573 - 58 34541523 rpmD PG1920 - 50S ribosomal protein L30 1644 46.82 0 2016593..2017111 - 172 34541524 rpsE PG1921 - 30S ribosomal protein S5 1645 43.19 -1 2017117..2017461 - 114 34541525 rplR PG1922 - 50S ribosomal protein L18 1646 45.11 0 2017480..2018031 - 183 34541526 rplF PG1923 - 50S ribosomal protein L6 1647 42.42 -1 2018050..2018445 - 131 34541527 rpsH PG1924 - 30S ribosomal protein S8 1648 47.78 0 2018496..2018765 - 89 34541528 rpsN PG1925 - 30S ribosomal protein S14 1649 43.14 -1 2018767..2019327 - 186 34541529 rplE PG1926 - 50S ribosomal protein L5 1650 42.99 -1 2019327..2019647 - 106 34541530 rplX PG1927 - 50S ribosomal protein L24 1651 47.54 0 2019670..2020035 - 121 34541531 rplN PG1928 - 50S ribosomal protein L14 1652 40.00 -1 2020037..2020291 - 84 34541532 rpsQ PG1929 - 30S ribosomal protein S17 1653 45.64 0 2020305..2020499 - 64 34541533 rpmC PG1930 - 50S ribosomal protein L29 1654 45.75 0 2020505..2020939 - 144 34541534 rplP PG1931 - 50S ribosomal protein L16 1655 49.80 0 2020960..2021700 - 246 34541535 rpsC PG1932 - 30S ribosomal protein S3 1656 49.00 0 2021707..2022057 - 116 34541536 rplV PG1933 - 50S ribosomal protein L22 1657 44.44 0 2022166..2022435 - 89 34541537 rpsS PG1934 - 30S ribosomal protein S19 1658 51.15 0 2022458..2023282 - 274 34541538 rplB PG1935 - 50S ribosomal protein L2 1659 42.18 -1 2023289..2023582 - 97 34541539 rplW PG1936 - 50S ribosomal protein L23 1660 48.10 0 2023597..2024226 - 209 34541540 rplD PG1937 - 50S ribosomal protein L4 1661 48.71 0 2024226..2024843 - 205 34541541 rplC PG1938 - 50S ribosomal protein L3 1662 45.42 0 2024866..2025171 - 101 34541542 rpsJ PG1939 - 30S ribosomal protein S10 1663 52.12 0 2025187..2027310 - 707 34541543 fusA PG1940 - elongation factor G 1664 48.01 0 2027323..2027799 - 158 34541544 rpsG PG1941 - 30S ribosomal protein S7 1665 54.81 +1 2028036..2028440 - 134 34541545 rpsL PG1942 - 30S ribosomal protein S12 1666 50.51 0 2029064..2030350 - 428 34541546 - PG1943 - hypothetical protein 1667 56.19 +1 2030556..2031815 + 419 34541547 aroA PG1944 - 3-phosphoshikimate 1-carboxyvinyltransferase 1668 53.15 0 2031837..2032280 + 147 34541548 - PG1945 - hypothetical protein 1669 52.91 0 2032273..2033079 + 268 34541549 - PG1946 - ABC 3 transporter family protein 1670 52.25 0 2033072..2036554 + 1160 34541550 - PG1947 - TPR domain-containing protein 1671 52.18 0 2036579..2038000 + 473 34541551 - PG1948 - putative lipoprotein 1672 52.94 0 2038274..2039278 - 334 34541552 mdh PG1949 - malate dehydrogenase 1673 46.08 0 2039740..2040900 + 386 34541553 - PG1950 - hypothetical protein 1674 52.09 0 2041282..2042982 + 566 34541554 glnS PG1951 - glutaminyl-tRNA synthetase 1675 49.07 0 2043010..2043657 + 215 34541555 - PG1952 - DedA family protein 1676 47.33 0 2043714..2044649 + 311 34541556 - PG1953 - YitT family protein 1677 51.96 0 2044653..2045672 + 339 34541557 - PG1954 - NAD dependent epimerase/reductase-related protein 1678 51.54 0 2046305..2047600 - 431 34541558 abfT-2 PG1956 - 4-hydroxybutyrate CoA-transferase 1679 43.39 -1 2048307..2048495 - 62 34541559 rpmG PG1959 - 50S ribosomal protein L33 1680 47.50 0 2048514..2048753 - 79 34541560 rpmB PG1960 - 50S ribosomal protein L28 1681 51.15 0 2048976..2051243 - 755 34541561 - PG1961 - hypothetical protein 1682 57.29 +1 2052478..2053053 + 191 34541562 - PG1963 - Sua5/YciO/YrdC/YwlC family protein 1683 55.15 +1 2053050..2054456 + 468 34541563 - PG1964 - sugar transferase 1684 55.02 +1 2056208..2057014 - 268 34541564 - PG1966 - hypothetical protein 1685 59.80 +2 2057308..2058195 + 295 34541565 - PG1967 - TPR domain-containing protein 1686 44.76 0 2058550..2058654 - 34 34541566 - PG1968 - hypothetical protein 1687 52.05 0 2058703..2059605 - 300 34541567 - PG1969 - hypothetical protein 1688 41.33 -1 2059574..2059873 - 99 34541568 - PG1970 - hypothetical protein 1689 58.02 +1 2060142..2061263 + 373 34541569 - PG1972 - hemagglutinin protein HagB 1690 37.91 -2 2062054..2063145 - 363 34541570 - PG1974 - hypothetical protein 1691 59.92 +2 2063358..2064410 + 350 34541571 - PG1975 - hemagglutinin protein HagC 1692 58.94 +2 2064777..2066783 - 668 34541572 - PG1977 - hypothetical protein 1693 50.08 0 2066813..2067427 - 204 34541573 - PG1978 - hypothetical protein 1694 44.64 0 2067412..2067579 + 55 34541574 - PG1979 - hypothetical protein 1695 52.63 0 2067850..2068020 - 56 34541575 - PG1980 - hypothetical protein 1696 47.42 0 2069305..2069595 - 96 34541576 cas2-1 PG1981 - CRISPR-associated Cas2 family protein 1697 50.65 0 2069615..2072710 - 1031 34541577 - PG1982 - CRISPR-associated Cas1 family protein 1698 43.04 -1 2072771..2073532 - 253 34541578 - PG1983 - CRISPR-associated Cmr5 family protein 1699 43.92 0 2073529..2073972 - 147 34541579 - PG1984 - hypothetical protein 1700 42.74 -1 2073969..2074670 - 233 34541580 - PG1985 - CRISPR-associated Cmr4 family protein 1701 43.58 -1 2074684..2075874 - 396 34541581 - PG1986 - CRISPR-associated Cmr3 family protein 1702 41.96 -1 2075876..2077522 - 548 34541582 - PG1987 - CRISPR-associated Csm1 family protein 1703 37.21 -2 2077515..2078957 - 480 34541583 - PG1988 - hypothetical protein 1704 36.99 -2 2078973..2079191 - 72 34541584 - PG1989 - hypothetical protein 1705 55.06 +1 2081550..2083427 + 625 34541585 gidA PG1992 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1706 49.67 0 2083461..2085260 + 599 34541586 uvrC PG1993 - excinuclease ABC, C subunit 1707 49.45 0 2085267..2085719 + 150 34541587 dtd PG1994 - D-tyrosyl-tRNA deacylase 1708 45.58 0 2085724..2086074 + 116 34541588 - PG1995 - hypothetical protein 1709 50.23 0 2086061..2086930 + 289 34541589 deoC PG1996 - deoxyribose-phosphate aldolase 1710 50.00 0 2086971..2087132 + 53 34541590 - PG1997 - hypothetical protein 1711 49.60 0 2087241..2088119 - 292 34541591 - PG1998 - polyprenyl synthetase 1712 46.95 0 2088273..2088911 - 212 34541592 - PG1999 - hypothetical protein 1713 50.72 0 2088932..2089558 - 208 34541593 - PG2000 - signal peptidase-related protein 1714 49.57 0 2089548..2090945 - 465 34541594 lepB PG2001 - signal peptidase I 1715 54.39 +1 2090961..2091677 - 238 34541595 dapB PG2002 - dihydrodipicolinate reductase 1716 53.65 +1 2091738..2093081 - 447 34541596 dgt PG2003 - deoxyguanosinetriphosphate triphosphohydrolase 1717 51.06 0 2093225..2094217 - 330 34541597 - PG2004 - hypothetical protein 1718 48.06 0 2094727..2095086 + 119 34541598 - PG2006 - hypothetical protein 1719 49.32 0 2095383..2097884 + 833 34541599 - PG2008 - TonB-dependent receptor, putative 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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