version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1521 52.72 0 1867194..1867982 + 262 34541401 - PG1778 - hypothetical protein 1522 53.13 0 1868064..1868558 + 164 34541402 - PG1779 - hypothetical protein 1523 51.68 0 1868926..1870113 + 395 34541403 bioF-3 PG1780 - 8-amino-7-oxononanoate synthase 1524 47.62 0 1870163..1870792 + 209 34541404 udk PG1781 - uridine kinase 1525 48.06 0 1870834..1872021 + 395 34541405 - PG1782 - hypothetical protein 1526 46.27 0 1872008..1872718 + 236 34541406 - PG1783 - glycosyl transferase, group 2 family protein 1527 48.93 0 1872706..1873500 + 264 34541407 - PG1784 - hypothetical protein 1528 46.89 0 1874498..1875382 + 294 34541408 - PG1786 - hypothetical protein 1529 47.44 0 1875531..1875998 - 155 34541409 - PG1787 - hypothetical protein 1530 47.72 0 1876116..1877387 + 423 34541410 - PG1788 - cysteine peptidase, putative 1531 52.48 0 1877507..1879543 - 678 34541411 dcp-2 PG1789 - peptidyl-dipeptidase Dcp 1532 52.26 0 1879560..1881044 - 494 34541412 - PG1790 - hypothetical protein 1533 51.39 0 1881041..1881256 - 71 34541413 - PG1791 - hypothetical protein 1534 49.22 0 1881762..1884065 + 767 34541414 - PG1792 - sodium/hydrogen antiporter 1535 50.82 0 1884062..1886068 + 668 34541415 glgB PG1793 - 1,4-alpha-glucan branching enzyme 1536 52.25 0 1886118..1888898 + 926 34541416 polA PG1794 - DNA polymerase type I 1537 44.28 0 1889045..1889866 - 273 34541417 - PG1795 - hypothetical protein 1538 46.29 0 1890153..1893038 + 961 34541418 - PG1797 - DNA-binding response regulator/sensor histidine kinase 1539 46.14 0 1893118..1894335 - 405 34541419 - PG1798 - immunoreactive 46 kDa antigen PG99 1540 48.10 0 1894639..1894848 + 69 34541420 - PG1799 - hypothetical protein 1541 47.04 0 1895086..1895676 + 196 34541421 - PG1801 - v-type ATPase, subunit E, putative 1542 50.69 0 1895680..1896618 + 312 34541422 - PG1802 - hypothetical protein 1543 50.43 0 1896628..1898382 + 584 34541423 atpA PG1803 - V-type ATP synthase subunit A 1544 51.67 0 1898394..1899713 + 439 34541424 atpB PG1804 - V-type ATP synthase subunit B 1545 48.78 0 1899729..1900343 + 204 34541425 atpD PG1805 - V-type ATP synthase subunit D 1546 49.42 0 1900340..1902154 + 604 34541426 atpI PG1806 - v-type ATPase, subunit I 1547 50.52 0 1902209..1902685 + 158 34541427 atpK PG1807 - v-type ATPase, subunit K 1548 48.97 0 1903045..1905333 - 762 34541428 spoT PG1808 - guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 1549 49.08 0 1905581..1906126 - 181 34541429 - PG1809 - 2-oxoglutarate oxidoreductase, gamma subunit 1550 49.64 0 1906155..1906847 - 230 34541430 - PG1810 - 2-oxoglutarate oxidoreductase, beta subunit 1551 47.31 0 1906943..1907035 + 30 34541431 - PG1811 - hypothetical protein 1552 51.69 0 1907136..1908197 - 353 34541432 - PG1812 - 2-ketoisovalerate ferredoxin reductase 1553 45.18 0 1908237..1908464 - 75 34541433 - PG1813 - ferredoxin, 4Fe-4S 1554 48.81 0 1908696..1910717 - 673 34541434 dnaG PG1814 - DNA primase 1555 52.55 0 1910759..1911523 - 254 34541435 kdsB PG1815 - 3-deoxy-manno-octulosonate cytidylyltransferase 1556 52.11 0 1911520..1912041 - 173 34541436 - PG1816 - quinone family NAD(P)H dehydrogenase 1557 45.96 0 1912310..1913125 - 271 34541437 - PG1817 - hypothetical protein 1558 49.51 0 1913118..1913834 - 238 34541438 - PG1818 - hypothetical protein 1559 50.08 0 1913786..1914412 - 208 34541439 - PG1819 - hypothetical protein 1560 48.96 0 1914483..1915979 - 498 34541440 nrfA PG1820 - cytochrome c nitrite reductase 1561 47.22 0 1916001..1916612 - 203 34541441 nrfH PG1821 - cytochrome c nitrite reductase, small subunit NrfH 1562 44.04 0 1917457..1918110 + 217 34541442 - PG1823 - hypothetical protein 1563 51.80 0 1918243..1919520 - 425 34541443 eno PG1824 - phosphopyruvate hydratase 1564 44.44 0 1919600..1919761 - 53 34541444 - PG1825 - hypothetical protein 1565 49.52 0 1919736..1920155 - 139 34541445 - PG1826 - hypothetical protein 1566 44.70 0 1920154..1920795 + 213 34541446 - PG1827 - ECF subfamily RNA polymerase sigma factor 1567 45.54 0 1921014..1921226 - 70 34541447 - PG1828 - putative lipoprotein 1568 49.88 0 1921397..1923070 - 557 34541448 - PG1829 - long-chain-fatty-acid--CoA ligase, putative 1569 53.81 +1 1923545..1925512 - 655 34541449 recQ-2 PG1831 - ATP-dependent DNA helicase RecQ 1570 50.12 0 1926295..1927110 + 271 34541450 - PG1834 - glycogen synthase-related protein 1571 48.68 0 1927213..1928580 + 455 34541451 - PG1835 - putative lipoprotein 1572 48.46 0 1928683..1929918 + 411 34541452 nupG PG1836 - nucleoside permease NupG 1573 49.78 0 1930477..1936794 + 2105 34541453 - PG1837 - hemagglutinin protein HagA 1574 48.25 0 1937242..1937355 + 37 34541454 - PG1840 - hypothetical protein 1575 48.48 0 1937450..1938373 + 307 34541455 - PG1841 - hypothetical protein 1576 48.34 0 1938381..1939373 + 330 34541456 - PG1842 - acetyltransferase 1577 50.72 0 1946177..1946314 + 45 34541457 - PG1846 - hypothetical protein 1578 47.24 0 1946317..1946697 - 126 34541458 - PG1847 - endoribonuclease L-PSP, putative 1579 51.73 0 1946723..1947472 - 249 34541459 - PG1848 - RNA methyltransferase 1580 50.54 0 1947469..1949124 - 551 34541460 recN PG1849 - DNA repair protein RecN 1581 47.19 0 1949139..1950047 - 302 34541461 - PG1850 - hypothetical protein 1582 52.35 0 1950044..1951258 - 404 34541462 coaBC PG1851 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1583 49.36 0 1951284..1952063 - 259 34541463 - PG1852 - exonuclease 1584 49.91 0 1952076..1953209 - 377 34541464 dnaN PG1853 - DNA polymerase III, beta subunit 1585 52.87 0 1953415..1953972 - 185 34541465 - PG1854 - 5-formyltetrahydrofolate cyclo-ligase family protein 1586 50.21 0 1953932..1955566 - 544 34541466 - PG1855 - carboxyl-terminal protease 1587 49.34 0 1955574..1956029 - 151 34541467 - PG1856 - cytidine/deoxycytidylate deaminase family protein 1588 51.41 0 1956110..1956463 - 117 34541468 - PG1857 - hypothetical protein 1589 51.81 0 1956628..1957125 - 165 34541469 - PG1858 - flavodoxin FldA 1590 57.62 +1 1957264..1958424 - 386 34541470 - PG1859 - glycerate kinase family protein 1591 46.58 0 1958664..1959848 - 394 34541471 - PG1860 - hypothetical protein 1592 48.54 0 1959977..1960147 - 56 34541472 - PG1861 - hypothetical protein 1593 45.58 0 1960160..1960453 - 97 34541473 - PG1862 - hypothetical protein 1594 49.67 0 1960454..1960606 - 50 34541474 - PG1863 - hypothetical protein 1595 42.80 -1 1960599..1964399 - 1266 34541475 - PG1864 - leucine-rich protein 1596 53.17 0 1964671..1964796 + 41 34541476 - PG1866 - hypothetical protein 1597 50.38 0 1965188..1965709 - 173 34541477 - PG1868 - hypothetical protein 1598 51.19 0 1965745..1965912 - 55 34541478 - PG1869 - hypothetical protein 1599 52.88 0 1965958..1966617 - 219 34541479 - PG1870 - UbiE/COQ5 family methlytransferase 1600 41.92 -1 1966659..1966949 - 96 34541480 - PG1871 - hypothetical protein 1601 53.33 0 1967022..1969001 - 659 34541481 hutU PG1872 - urocanate hydratase 1602 53.68 +1 1969343..1969750 - 135 34541482 - PG1874 - hypothetical protein 1603 49.74 0 1969737..1970711 - 324 34541483 - PG1875 - hemolysin 1604 50.72 0 1970723..1971550 - 275 34541484 - PG1876 - hypothetical protein 1605 48.05 0 1971579..1972937 - 452 34541485 nhaA PG1877 - Na+/H+ antiporter 1606 51.39 0 1973068..1974540 + 490 34541486 cysS PG1878 - cysteinyl-tRNA synthetase 1607 46.76 0 1974591..1975610 + 339 34541487 - PG1879 - hypothetical protein 1608 48.37 0 1975621..1976631 + 336 34541488 - PG1880 - glycosyl transferase, group 2 family protein 1609 46.43 0 1976664..1978106 + 480 34541489 - PG1881 - hypothetical protein 1610 50.22 0 1979058..1981082 - 674 34541490 - PG1884 - alpha-L-fucosidase precursor, putative 1611 51.87 0 1981155..1983242 - 695 34541491 ppk PG1885 - polyphosphate kinase 1612 51.84 0 1983406..1984626 - 406 34541492 hflX PG1886 - GTP-binding protein HflX 1613 54.59 +1 1984705..1985739 + 344 34541493 - PG1887 - tRNA 2-selenouridine synthase 1614 53.98 +1 1985736..1986350 + 204 34541494 - PG1888 - hypothetical protein 1615 42.88 -1 1986491..1987150 + 219 34541495 - PG1889 - hypothetical protein 1616 42.11 -1 1987705..1987932 + 75 34541496 - PG1890 - putative lipoprotein 1617 33.92 -2 1987996..1988505 + 169 34541497 - PG1891 - hypothetical protein 1618 38.24 -2 1989565..1989951 + 128 34541498 - PG1892 - hypothetical protein 1619 34.75 -2 1991100..1991873 + 257 34541499 - PG1893 - hypothetical protein 1620 40.24 -1 1992417..1992995 + 192 34541500 - PG1894 - hypothetical protein 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0