version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1474 51.55 0 1814906..1815388 + 160 34541354 - PG1725 - competence/damage inducible protein CinA 1475 50.46 0 1815421..1816839 + 472 34541355 - PG1726 - PDZ domain-containing protein 1476 51.39 0 1816849..1817712 + 287 34541356 yitL PG1727 - yitL protein 1477 49.01 0 1817784..1818236 + 150 34541357 - PG1728 - cytidine/deoxycytidylate deaminase family protein 1478 46.67 0 1818432..1818971 - 179 34541358 - PG1729 - thiol peroxidase 1479 52.84 0 1819017..1819667 - 216 34541359 - PG1730 - O-methyltransferase family protein 1480 52.82 0 1819768..1820193 - 141 34541360 aroQ PG1731 - 3-dehydroquinate dehydratase 1481 50.05 0 1820311..1821237 + 308 34541361 xerD PG1732 - integrase/recombinase XerD 1482 48.63 0 1821276..1821713 - 145 34541362 - PG1733 - hypothetical protein 1483 48.94 0 1821710..1822651 - 313 34541363 - PG1734 - transporter, putative 1484 50.27 0 1822618..1823172 - 184 34541364 - PG1735 - MutT/nudix family protein 1485 50.14 0 1824187..1825221 - 344 34541365 - PG1738 - hypothetical protein 1486 49.66 0 1825218..1825799 - 193 34541366 - PG1739 - hypothetical protein 1487 52.80 0 1825946..1827373 - 475 34541367 aspA PG1741 - aspartate ammonia-lyase 1488 43.50 -1 1827390..1827566 + 58 34541368 - PG1742 - hypothetical protein 1489 56.65 +1 1827620..1828438 - 272 34541369 kdsA PG1743 - 2-dehydro-3-deoxyphosphooctonate aldolase 1490 49.62 0 1829525..1831114 - 529 34541370 - PG1745 - phosphoribulokinase family protein 1491 41.82 -1 1831190..1832320 - 376 34541371 - PG1746 - ISPg2, transposase 1492 52.05 0 1832468..1832905 - 145 34541372 - PG1747 - ribose 5-phosphate isomerase B, putative 1493 54.09 +1 1832992..1835019 - 675 34541373 tkt PG1748 - transketolase 1494 53.05 0 1835463..1837283 + 606 34541374 - PG1750 - alpha-1,3/4-fucosidase, putative 1495 54.55 +1 1837420..1838550 + 376 34541375 - PG1751 - aminotransferase, class V 1496 44.44 0 1838534..1838758 + 74 34541376 - PG1752 - hypothetical protein 1497 55.30 +1 1838755..1839801 + 348 34541377 selD PG1753 - selenide, water dikinase 1498 51.74 0 1839819..1842344 + 841 34541378 - PG1754 - hypothetical protein 1499 52.15 0 1842487..1843368 - 293 34541379 fbaB PG1755 - fructose-1,6-bisphosphate aldolase 1500 50.68 0 1844021..1845052 - 343 34541380 - PG1757 - hypothetical protein 1501 46.30 0 1845325..1845594 + 89 34541381 rpsO PG1758 - 30S ribosomal protein S15 1502 53.38 0 1845710..1846657 + 315 34541382 - PG1759 - adhesion protein, putative 1503 51.75 0 1846647..1847276 + 209 34541383 - PG1760 - ABC transporter, ATP-binding protein 1504 53.82 +1 1847224..1847799 + 191 34541384 - PG1761 - acetyltransferase 1505 48.03 0 1848017..1850962 + 981 161579529 secDF PG1762 - bifunctional preprotein translocase subunit SecD/SecF 1506 45.52 0 1851089..1851802 - 237 34541386 rnc PG1763 - ribonuclease III 1507 50.20 0 1851886..1853142 - 418 34541387 fabF PG1764 - 3-oxoacyl-(acyl-carrier-protein) synthase II 1508 41.35 -1 1853152..1853388 - 78 34541388 acpP PG1765 - acyl carrier protein 1509 48.80 0 1853557..1854138 + 193 34541389 purN PG1766 - phosphoribosylglycinamide formyltransferase 1510 48.61 0 1854135..1855175 + 346 34541390 - PG1767 - putative lipoprotein 1511 54.99 +1 1855201..1856742 + 513 34541391 - PG1768 - magnesium chelatase subunit D/I family protein 1512 54.63 +1 1856747..1857070 + 107 34541392 - PG1769 - hypothetical protein 1513 51.92 0 1857424..1858101 + 225 34541393 - PG1770 - hypothetical protein 1514 51.81 0 1858178..1859200 + 340 34541394 pheS PG1771 - phenylalanyl-tRNA synthetase subunit alpha 1515 53.04 0 1859219..1859893 + 224 34541395 nth PG1772 - endonuclease III 1516 50.37 0 1859955..1861292 + 445 34541396 - PG1773 - PAP2 superfamily protein 1517 52.15 0 1861269..1864637 - 1122 34541397 mfd PG1774 - transcription-repair coupling factor 1518 52.48 0 1864984..1865568 + 194 34541398 grpE PG1775 - grpE protein 1519 53.04 0 1865611..1866762 + 383 34541399 dnaJ PG1776 - dnaJ protein 1520 48.74 0 1866848..1867165 + 105 34541400 - PG1777 - hypothetical protein 1521 52.72 0 1867194..1867982 + 262 34541401 - PG1778 - hypothetical protein 1522 53.13 0 1868064..1868558 + 164 34541402 - PG1779 - hypothetical protein 1523 51.68 0 1868926..1870113 + 395 34541403 bioF-3 PG1780 - 8-amino-7-oxononanoate synthase 1524 47.62 0 1870163..1870792 + 209 34541404 udk PG1781 - uridine kinase 1525 48.06 0 1870834..1872021 + 395 34541405 - PG1782 - hypothetical protein 1526 46.27 0 1872008..1872718 + 236 34541406 - PG1783 - glycosyl transferase, group 2 family protein 1527 48.93 0 1872706..1873500 + 264 34541407 - PG1784 - hypothetical protein 1528 46.89 0 1874498..1875382 + 294 34541408 - PG1786 - hypothetical protein 1529 47.44 0 1875531..1875998 - 155 34541409 - PG1787 - hypothetical protein 1530 47.72 0 1876116..1877387 + 423 34541410 - PG1788 - cysteine peptidase, putative 1531 52.48 0 1877507..1879543 - 678 34541411 dcp-2 PG1789 - peptidyl-dipeptidase Dcp 1532 52.26 0 1879560..1881044 - 494 34541412 - PG1790 - hypothetical protein 1533 51.39 0 1881041..1881256 - 71 34541413 - PG1791 - hypothetical protein 1534 49.22 0 1881762..1884065 + 767 34541414 - PG1792 - sodium/hydrogen antiporter 1535 50.82 0 1884062..1886068 + 668 34541415 glgB PG1793 - 1,4-alpha-glucan branching enzyme 1536 52.25 0 1886118..1888898 + 926 34541416 polA PG1794 - DNA polymerase type I 1537 44.28 0 1889045..1889866 - 273 34541417 - PG1795 - hypothetical protein 1538 46.29 0 1890153..1893038 + 961 34541418 - PG1797 - DNA-binding response regulator/sensor histidine kinase 1539 46.14 0 1893118..1894335 - 405 34541419 - PG1798 - immunoreactive 46 kDa antigen PG99 1540 48.10 0 1894639..1894848 + 69 34541420 - PG1799 - hypothetical protein 1541 47.04 0 1895086..1895676 + 196 34541421 - PG1801 - v-type ATPase, subunit E, putative 1542 50.69 0 1895680..1896618 + 312 34541422 - PG1802 - hypothetical protein 1543 50.43 0 1896628..1898382 + 584 34541423 atpA PG1803 - V-type ATP synthase subunit A 1544 51.67 0 1898394..1899713 + 439 34541424 atpB PG1804 - V-type ATP synthase subunit B 1545 48.78 0 1899729..1900343 + 204 34541425 atpD PG1805 - V-type ATP synthase subunit D 1546 49.42 0 1900340..1902154 + 604 34541426 atpI PG1806 - v-type ATPase, subunit I 1547 50.52 0 1902209..1902685 + 158 34541427 atpK PG1807 - v-type ATPase, subunit K 1548 48.97 0 1903045..1905333 - 762 34541428 spoT PG1808 - guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 1549 49.08 0 1905581..1906126 - 181 34541429 - PG1809 - 2-oxoglutarate oxidoreductase, gamma subunit 1550 49.64 0 1906155..1906847 - 230 34541430 - PG1810 - 2-oxoglutarate oxidoreductase, beta subunit 1551 47.31 0 1906943..1907035 + 30 34541431 - PG1811 - hypothetical protein 1552 51.69 0 1907136..1908197 - 353 34541432 - PG1812 - 2-ketoisovalerate ferredoxin reductase 1553 45.18 0 1908237..1908464 - 75 34541433 - PG1813 - ferredoxin, 4Fe-4S 1554 48.81 0 1908696..1910717 - 673 34541434 dnaG PG1814 - DNA primase 1555 52.55 0 1910759..1911523 - 254 34541435 kdsB PG1815 - 3-deoxy-manno-octulosonate cytidylyltransferase 1556 52.11 0 1911520..1912041 - 173 34541436 - PG1816 - quinone family NAD(P)H dehydrogenase 1557 45.96 0 1912310..1913125 - 271 34541437 - PG1817 - hypothetical protein 1558 49.51 0 1913118..1913834 - 238 34541438 - PG1818 - hypothetical protein 1559 50.08 0 1913786..1914412 - 208 34541439 - PG1819 - hypothetical protein 1560 48.96 0 1914483..1915979 - 498 34541440 nrfA PG1820 - cytochrome c nitrite reductase 1561 47.22 0 1916001..1916612 - 203 34541441 nrfH PG1821 - cytochrome c nitrite reductase, small subunit NrfH 1562 44.04 0 1917457..1918110 + 217 34541442 - PG1823 - hypothetical protein 1563 51.80 0 1918243..1919520 - 425 34541443 eno PG1824 - phosphopyruvate hydratase 1564 44.44 0 1919600..1919761 - 53 34541444 - PG1825 - hypothetical protein 1565 49.52 0 1919736..1920155 - 139 34541445 - PG1826 - hypothetical protein 1566 44.70 0 1920154..1920795 + 213 34541446 - PG1827 - ECF subfamily RNA polymerase sigma factor 1567 45.54 0 1921014..1921226 - 70 34541447 - PG1828 - putative lipoprotein 1568 49.88 0 1921397..1923070 - 557 34541448 - PG1829 - long-chain-fatty-acid--CoA ligase, putative 1569 53.81 +1 1923545..1925512 - 655 34541449 recQ-2 PG1831 - ATP-dependent DNA helicase RecQ 1570 50.12 0 1926295..1927110 + 271 34541450 - PG1834 - glycogen synthase-related protein 1571 48.68 0 1927213..1928580 + 455 34541451 - PG1835 - putative lipoprotein 1572 48.46 0 1928683..1929918 + 411 34541452 nupG PG1836 - nucleoside permease NupG 1573 49.78 0 1930477..1936794 + 2105 34541453 - PG1837 - hemagglutinin protein HagA 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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