version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1379 46.90 0 1689931..1690365 - 144 34541259 mmdC PG1609 - methylmalonyl-CoA decarboxylase, gamma subunit 1380 45.57 0 1690403..1690639 - 78 34541260 - PG1610 - hypothetical protein 1381 46.92 0 1690636..1691577 - 313 34541261 - PG1611 - hypothetical protein 1382 50.19 0 1691602..1693155 - 517 34541262 mmdA PG1612 - methylmalonyl-CoA decarboxylase, alpha subunit 1383 46.17 0 1693254..1693658 - 134 34541263 - PG1613 - glyoxalase family protein 1384 51.98 0 1693890..1694645 - 251 34541264 frdB PG1614 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 1385 53.03 0 1694674..1696617 - 647 34541265 sdhA PG1615 - succinate dehydrogenase flavoprotein subunit 1386 50.65 0 1696648..1697340 - 230 34541266 - PG1616 - hypothetical protein 1387 46.19 0 1697387..1697845 - 152 34541267 - PG1617 - hypothetical protein 1388 52.69 0 1698043..1698729 + 228 34541268 - PG1618 - hypothetical protein 1389 53.39 0 1698708..1699475 + 255 34541269 - PG1619 - biotin synthesis protein BioC, putative 1390 49.49 0 1699505..1700581 - 358 34541270 - PG1620 - carboxyl-terminal protease-related protein 1391 50.21 0 1700574..1701521 - 315 34541271 - PG1621 - hypothetical protein 1392 50.32 0 1701508..1704204 - 898 34541272 - PG1622 - DNA topoisomerase IV subunit A 1393 51.30 0 1704265..1705455 - 396 34541273 - PG1623 - membrane bound regulatory protein, putative 1394 48.16 0 1706278..1707363 - 361 34541274 - PG1624 - ISPg1, transposase 1395 47.55 0 1707576..1708778 + 400 34541275 - PG1625 - hypothetical protein 1396 48.11 0 1708882..1710546 + 554 34541276 - PG1626 - hypothetical protein 1397 45.02 0 1711912..1712202 + 96 34541277 - PG1630 - hypothetical protein 1398 55.90 +1 1712408..1713475 + 355 34541278 galM PG1632 - aldose 1-epimerase 1399 51.26 0 1713525..1714679 + 384 34541279 galK PG1633 - galactokinase 1400 48.36 0 1714813..1715238 - 141 34541280 - PG1634 - hypothetical protein 1401 51.85 0 1715304..1715951 - 215 34541281 - PG1635 - hypothetical protein 1402 51.01 0 1715965..1718550 - 861 34541282 - PG1636 - FtsK/SpoIIIE family protein 1403 50.96 0 1718754..1719740 - 328 34541283 - PG1638 - thioredoxin family protein 1404 45.14 0 1719866..1720009 - 47 34541284 - PG1639 - hypothetical protein 1405 56.67 +1 1720025..1721335 - 436 34541285 dinF PG1640 - DNA-damage-inducible protein F 1406 55.56 +1 1721350..1721853 - 167 34541286 - PG1641 - phosphotyrosine protein phosphatase 1407 49.95 0 1724771..1725709 - 312 34541287 - PG1644 - ISPg5, transposase Orf2 1408 44.87 0 1725763..1726152 - 129 34541288 - PG1645 - ISPg5, transposase Orf1 1409 52.32 0 1726413..1727834 + 473 34541289 cls PG1647 - cardiolipin synthetase 1410 52.88 0 1727902..1730142 + 746 34541290 - PG1648 - RelA/SpoT family protein 1411 46.34 0 1730120..1730242 - 40 34541291 - PG1649 - hypothetical protein 1412 51.71 0 1730466..1733453 + 995 34541292 - PG1651 - TPR domain-containing protein 1413 48.97 0 1733480..1735270 + 596 34541293 - PG1652 - hypothetical protein 1414 52.29 0 1735295..1736518 + 407 34541294 - PG1653 - hypothetical protein 1415 53.53 0 1736598..1737221 + 207 34541295 - PG1654 - D-alanyl-D-alanine dipeptidase 1416 44.29 0 1737235..1737444 + 69 34541296 - PG1655 - hypothetical protein 1417 52.40 0 1737599..1739455 + 618 34541297 mutA PG1656 - methylmalonyl-CoA mutase, small subunit 1418 54.33 +1 1739484..1741631 + 715 34541298 mutB PG1657 - methylmalonyl-CoA mutase 1419 45.77 0 1741837..1742994 - 385 34541299 - PG1658 - ISPg4, transposase 1420 52.42 0 1743445..1743837 - 130 34541300 - PG1659 - hypothetical protein 1421 53.90 +1 1743834..1744358 - 174 34541301 - PG1660 - ECF subfamily RNA polymerase sigma factor 1422 40.28 -1 1744608..1744895 + 95 34541302 - PG1661 - hypothetical protein 1423 47.20 0 1744876..1745250 + 124 34541303 - PG1662 - hypothetical protein 1424 54.39 +1 1745269..1745928 + 219 34541304 - PG1663 - ABC transporter, ATP-binding protein 1425 51.61 0 1745953..1747227 + 424 34541305 - PG1664 - ABC transporter, permease protein, putative 1426 48.14 0 1747250..1748512 + 420 34541306 - PG1665 - ABC transporter, permease protein, putative 1427 50.77 0 1748582..1749688 + 368 34541307 - PG1666 - RND family efflux transporter MFP subunit 1428 53.14 0 1749685..1751052 + 455 34541308 - PG1667 - outer membrane efflux protein 1429 44.23 0 1755501..1755656 - 51 34541309 - PG1669 - hypothetical protein 1430 44.65 0 1755785..1755943 - 52 34541310 - PG1670 - hypothetical protein 1431 44.29 0 1757530..1757748 - 72 34541311 - PG1671 - hypothetical protein 1432 45.24 0 1757777..1757944 + 55 34541312 - PG1672 - hypothetical protein 1433 45.60 0 1758528..1759685 + 385 34541313 - PG1673 - ISPg4, transposase 1434 64.65 +2 1760322..1760420 + 32 34541314 - PG1675 - hypothetical protein 1435 54.66 +1 1760579..1762186 - 535 34541315 pckA PG1676 - phosphoenolpyruvate carboxykinase 1436 54.97 +1 1762482..1763738 + 418 34541316 pgk PG1677 - phosphoglycerate kinase 1437 49.07 0 1763845..1763952 - 35 34541317 - PG1678 - hypothetical protein 1438 48.96 0 1763936..1765330 + 464 34541318 - PG1679 - hypothetical protein 1439 51.59 0 1766552..1768528 + 658 34541319 - PG1681 - glycogen debranching protein 1440 52.34 0 1768525..1769787 + 420 34541320 - PG1682 - glycosyl transferase, group 1 family protein 1441 48.80 0 1769784..1771070 + 428 34541321 - PG1683 - hypothetical protein 1442 48.22 0 1771067..1771543 + 158 34541322 - PG1684 - hypothetical protein 1443 41.25 -1 1772306..1773088 - 260 34541323 - PG1685 - hypothetical protein 1444 51.03 0 1773902..1774291 - 129 34541324 - PG1687 - HIT family protein 1445 46.07 0 1774306..1774776 - 156 34541325 greA PG1688 - transcription elongation factor GreA 1446 54.56 +1 1775261..1775863 - 200 34541326 - PG1690 - Sua5/YciO/YrdC/YwlC family protein 1447 51.06 0 1775870..1776574 - 234 34541327 - PG1691 - hypothetical protein 1448 54.70 +1 1776604..1777263 - 219 34541328 - PG1692 - ABC transporter, ATP-binding protein 1449 54.93 +1 1777260..1778009 - 249 34541329 - PG1693 - HesA/MoeB/ThiF family protein 1450 53.52 0 1778006..1779100 - 364 34541330 - PG1694 - hypothetical protein 1451 40.10 -1 1779580..1779771 + 63 34541331 - PG1695 - hypothetical protein 1452 45.86 0 1780113..1781150 + 345 34541332 - PG1696 - type II DNA modification methyltransferase, putative 1453 48.50 0 1781160..1785134 + 1324 34541333 - PG1697 - type II restriction endonuclease, putative 1454 52.63 0 1786235..1788043 - 602 34541334 - PG1701 - glutamine amidotransferase, class II/dipeptidase 1455 50.18 0 1788036..1790000 - 654 34541335 gyrB PG1702 - DNA gyrase, B subunit 1456 52.80 0 1790058..1790843 - 261 34541336 mazG PG1703 - nucleoside triphosphate pyrophosphohydrolase 1457 49.68 0 1790861..1792909 - 682 34541337 - PG1704 - thiol:disulfide interchange protein dsbD, putative 1458 48.21 0 1793939..1794301 - 120 34541338 - PG1706 - hypothetical protein 1459 45.90 0 1794322..1794687 - 121 34541339 - PG1707 - hypothetical protein 1460 45.13 0 1795054..1795443 + 129 34541340 - PG1709 - ISPg5, transposase Orf1 1461 50.05 0 1795497..1796435 + 312 34541341 - PG1710 - ISPg5, transposase Orf2 1462 50.35 0 1796742..1799003 - 753 34541342 - PG1711 - alpha-1,2-mannosidase family protein 1463 50.90 0 1799070..1801415 - 781 34541343 - PG1712 - alpha-1,2-mannosidase family protein 1464 47.90 0 1801497..1801901 - 134 34541344 - PG1713 - putative lipoprotein 1465 52.40 0 1801938..1802582 - 214 34541345 pdxH PG1714 - pyridoxamine-phosphate oxidase 1466 50.08 0 1803483..1806146 - 887 34541346 - PG1715 - hypothetical protein 1467 46.74 0 1806622..1806897 - 91 34541347 - PG1718 - hypothetical protein 1468 52.62 0 1806889..1808739 + 616 34541348 - PG1719 - ABC transporter ATP-binding protein 1469 51.50 0 1808755..1810284 + 509 34541349 - PG1720 - hypothetical protein 1470 50.92 0 1810424..1812532 + 702 34541350 vacB PG1721 - ribonuclease R 1471 42.48 -1 1812723..1813028 - 101 34541351 - PG1722 - hypothetical protein 1472 46.67 0 1813209..1813463 + 84 34541352 rpsT PG1723 - 30S ribosomal protein S20 1473 52.44 0 1813881..1814906 + 341 34541353 gcp PG1724 - O-sialoglycoprotein endopeptidase 1474 51.55 0 1814906..1815388 + 160 34541354 - PG1725 - competence/damage inducible protein CinA 1475 50.46 0 1815421..1816839 + 472 34541355 - PG1726 - PDZ domain-containing protein 1476 51.39 0 1816849..1817712 + 287 34541356 yitL PG1727 - yitL protein 1477 49.01 0 1817784..1818236 + 150 34541357 - PG1728 - cytidine/deoxycytidylate deaminase family protein 1478 46.67 0 1818432..1818971 - 179 34541358 - PG1729 - thiol peroxidase 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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