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Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1304 53.22 0 1599190..1600260 - 356 34541184 - PG1522 - mandelate racemase/muconate lactonizing enzyme family protein 1305 50.92 0 1600260..1601078 - 272 34541185 menB PG1523 - naphthoate synthase 1306 52.08 0 1601103..1602836 - 577 34541186 menD PG1524 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1307 51.22 0 1602849..1603955 - 368 34541187 - PG1525 - isochorismate synthase, putative 1308 43.68 -1 1604022..1605461 - 479 34541188 - PG1526 - hypothetical protein 1309 35.53 -2 1605657..1605884 - 75 34541189 - PG1527 - hypothetical protein 1310 41.25 -1 1605923..1607248 + 441 34541190 - PG1528 - hypothetical protein 1311 32.07 -2 1607375..1609513 + 712 34541191 - PG1529 - hypothetical protein 1312 32.55 -2 1609510..1610400 + 296 34541192 - PG1530 - hypothetical protein 1313 37.44 -2 1611612..1611806 - 64 34541193 - PG1532 - hypothetical protein 1314 43.14 -1 1611803..1613851 - 682 34541194 - PG1533 - TOPRIM domain-containing protein 1315 45.90 0 1613848..1614237 - 129 34541195 - PG1534 - hypothetical protein 1316 43.27 -1 1614240..1614581 - 113 34541196 - PG1535 - transcriptional regulator, putative 1317 49.10 0 1616502..1617389 + 295 34541197 - PG1536 - cell division protein FtsX, putative 1318 45.00 0 1617364..1617663 + 99 34541198 - PG1537 - hypothetical protein 1319 49.23 0 1617771..1618613 + 280 34541199 - PG1538 - undecaprenol kinase, putative 1320 48.24 0 1619417..1620469 + 350 34541200 queA PG1540 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1321 51.33 0 1620466..1620915 + 149 34541201 folK PG1541 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1322 49.96 0 1620928..1622172 + 414 34541202 prtC PG1542 - collagenase 1323 48.10 0 1622228..1622647 + 139 34541203 - PG1543 - thioesterase family protein 1324 49.16 0 1622732..1623502 + 256 34541204 yaaA PG1544 - hypothetical protein 1325 49.31 0 1623640..1624215 + 191 34541205 sodB PG1545 - superoxide dismutase, Fe-Mn 1326 40.21 -1 1624227..1624415 + 62 34541206 - PG1546 - hypothetical protein 1327 41.24 -1 1624402..1624755 + 117 34541207 - PG1547 - hypothetical protein 1328 42.55 -1 1627897..1628037 - 46 34541208 - PG1549 - hypothetical protein 1329 47.09 0 1628578..1629006 + 142 34541209 hmuY PG1551 - hmuY protein 1330 46.63 0 1629021..1630961 + 646 34541210 hmuR PG1552 - TonB-dependent receptor HmuR 1331 51.47 0 1630998..1635407 + 1469 34541211 - PG1553 - CobN/magnesium chelatase family protein 1332 55.75 +1 1635404..1636081 + 225 34541212 - PG1554 - hypothetical protein 1333 56.99 +1 1636151..1636729 + 192 34541213 - PG1555 - hypothetical protein 1334 51.68 0 1636735..1637061 + 108 34541214 - PG1556 - hypothetical protein 1335 51.42 0 1637994..1639082 - 362 34541215 gcvT PG1559 - glycine cleavage system aminomethyltransferase T 1336 50.05 0 1639157..1640221 - 354 34541216 rfbB PG1560 - dTDP-glucose 4,6-dehydratase 1337 49.18 0 1640228..1641085 - 285 34541217 rfbD PG1561 - dTDP-4-dehydrorhamnose reductase 1338 46.53 0 1641082..1641672 - 196 34541218 rfbC PG1562 - dTDP-4-dehydrorhamnose 3,5-epimerase 1339 50.11 0 1641687..1642556 - 289 34541219 rfbA PG1563 - glucose-1-phosphate thymidylyltransferase 1340 48.52 0 1642671..1644626 - 651 34541220 - PG1564 - hypothetical protein 1341 50.52 0 1644711..1645949 - 412 34541221 - PG1565 - 3-deoxy-D-manno-octulosonic-acid transferase, putative 1342 52.24 0 1645974..1647491 - 505 34541222 gltX PG1566 - glutamyl-tRNA synthetase 1343 48.96 0 1648672..1649055 - 127 34541223 - PG1570 - rhodanese-like domain-containing protein 1344 52.68 0 1649028..1650443 - 471 34541224 - PG1571 - metallo-beta-lactamase superfamily protein 1345 52.42 0 1650536..1651342 - 268 34541225 - PG1572 - hypothetical protein 1346 45.07 0 1651407..1652258 - 283 34541226 - PG1573 - Crp family transcriptional regulator 1347 46.41 0 1652551..1652703 - 50 34541227 - PG1574 - hypothetical protein 1348 52.92 0 1653156..1654712 + 518 34541228 nadB PG1576 - L-aspartate oxidase 1349 50.85 0 1654759..1655586 + 275 34541229 nadC PG1577 - nicotinate-nucleotide pyrophosphorylase 1350 49.73 0 1655606..1656532 + 308 34541230 nadA PG1578 - quinolinate synthetase 1351 48.19 0 1656633..1657628 + 331 34541231 - PG1579 - MoxR family ATPase 1352 49.37 0 1657639..1658511 + 290 34541232 - PG1580 - hypothetical protein 1353 46.60 0 1658508..1659464 + 318 34541233 - PG1581 - hypothetical protein 1354 47.46 0 1659461..1660444 + 327 34541234 batA PG1582 - batA protein 1355 46.86 0 1660455..1661474 + 339 34541235 batB PG1583 - batB protein 1356 47.45 0 1661471..1662214 + 247 34541236 batC PG1584 - batC protein 1357 48.03 0 1662395..1664197 + 600 34541237 batD PG1585 - batD protein 1358 50.61 0 1664194..1665102 + 302 34541238 batE PG1586 - batE protein 1359 46.16 0 1665123..1665839 + 238 34541239 - PG1587 - PAP2 superfamily protein 1360 51.82 0 1665855..1666622 - 255 34541240 - PG1588 - hypothetical protein 1361 55.91 +1 1666683..1667528 - 281 34541241 folP PG1589 - dihydropteroate synthase 1362 35.97 -2 1668057..1669154 + 365 34541242 - PG1591 - hypothetical protein 1363 49.06 0 1669523..1671595 + 690 34541243 - PG1592 - HDIG domain-containing protein 1364 52.58 0 1671643..1672203 + 186 34541244 aroK PG1593 - shikimate kinase 1365 55.27 +1 1672142..1673677 - 511 34541245 - PG1594 - ComEC/Rec2-related protein 1366 55.10 +1 1673684..1674340 - 218 34541246 rpe PG1595 - ribulose-phosphate 3-epimerase 1367 52.81 0 1674683..1678096 + 1137 34541247 ileS PG1596 - isoleucyl-tRNA synthetase 1368 48.82 0 1678166..1678546 + 126 34541248 - PG1597 - DnaK suppressor protein, putative 1369 47.43 0 1678550..1679230 + 226 34541249 - PG1598 - lipoprotein signal peptidase, putative 1370 47.53 0 1679227..1680015 + 262 34541250 - PG1599 - hypothetical protein 1371 46.20 0 1680049..1681074 - 341 34541251 - PG1600 - hypothetical protein 1372 50.90 0 1681109..1681882 - 257 34541252 - PG1601 - biotin--acetyl-CoA-carboxylase ligase 1373 48.82 0 1681854..1682234 - 126 34541253 - PG1602 - hypothetical protein 1374 48.38 0 1682305..1682889 + 194 34541254 - PG1603 - HAM1 protein 1375 50.88 0 1682877..1685207 + 776 34541255 - PG1604 - immunoreactive 84 kDa antigen PG93 1376 50.89 0 1685319..1686662 + 447 34541256 pepC PG1605 - aminopeptidase C 1377 36.51 -2 1686993..1687715 - 240 34541257 - PG1606 - ion transporter 1378 49.83 0 1688775..1689926 - 383 34541258 mmdB PG1608 - methylmalonyl-CoA decarboxylase, beta subunit 1379 46.90 0 1689931..1690365 - 144 34541259 mmdC PG1609 - methylmalonyl-CoA decarboxylase, gamma subunit 1380 45.57 0 1690403..1690639 - 78 34541260 - PG1610 - hypothetical protein 1381 46.92 0 1690636..1691577 - 313 34541261 - PG1611 - hypothetical protein 1382 50.19 0 1691602..1693155 - 517 34541262 mmdA PG1612 - methylmalonyl-CoA decarboxylase, alpha subunit 1383 46.17 0 1693254..1693658 - 134 34541263 - PG1613 - glyoxalase family protein 1384 51.98 0 1693890..1694645 - 251 34541264 frdB PG1614 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 1385 53.03 0 1694674..1696617 - 647 34541265 sdhA PG1615 - succinate dehydrogenase flavoprotein subunit 1386 50.65 0 1696648..1697340 - 230 34541266 - PG1616 - hypothetical protein 1387 46.19 0 1697387..1697845 - 152 34541267 - PG1617 - hypothetical protein 1388 52.69 0 1698043..1698729 + 228 34541268 - PG1618 - hypothetical protein 1389 53.39 0 1698708..1699475 + 255 34541269 - PG1619 - biotin synthesis protein BioC, putative 1390 49.49 0 1699505..1700581 - 358 34541270 - PG1620 - carboxyl-terminal protease-related protein 1391 50.21 0 1700574..1701521 - 315 34541271 - PG1621 - hypothetical protein 1392 50.32 0 1701508..1704204 - 898 34541272 - PG1622 - DNA topoisomerase IV subunit A 1393 51.30 0 1704265..1705455 - 396 34541273 - PG1623 - membrane bound regulatory protein, putative 1394 48.16 0 1706278..1707363 - 361 34541274 - PG1624 - ISPg1, transposase 1395 47.55 0 1707576..1708778 + 400 34541275 - PG1625 - hypothetical protein 1396 48.11 0 1708882..1710546 + 554 34541276 - PG1626 - hypothetical protein 1397 45.02 0 1711912..1712202 + 96 34541277 - PG1630 - hypothetical protein 1398 55.90 +1 1712408..1713475 + 355 34541278 galM PG1632 - aldose 1-epimerase 1399 51.26 0 1713525..1714679 + 384 34541279 galK PG1633 - galactokinase 1400 48.36 0 1714813..1715238 - 141 34541280 - PG1634 - hypothetical protein 1401 51.85 0 1715304..1715951 - 215 34541281 - PG1635 - hypothetical protein 1402 51.01 0 1715965..1718550 - 861 34541282 - PG1636 - FtsK/SpoIIIE family protein 1403 50.96 0 1718754..1719740 - 328 34541283 - PG1638 - thioredoxin family protein 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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