version 1.0
Porphyromonas gingivalis W83, complete genome - 1..2343476 1909 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1280 37.48 -2 1566923..1569598 + 891 34541160 - PG1493 - hypothetical protein 1281 54.11 +1 1569981..1571294 + 437 34541161 - PG1494 - hypothetical protein 1282 55.35 +1 1571383..1573476 + 697 34541162 topB-2 PG1495 - DNA topoisomerase III 1283 50.72 0 1573482..1573757 + 91 34541163 - PG1496 - hypothetical protein 1284 59.66 +2 1574225..1574695 + 156 34541164 - PG1497 - histone-like family DNA-binding protein 1285 43.93 0 1574796..1575710 + 304 34541165 - PG1498 - hypothetical protein 1286 43.98 0 1575664..1576161 + 165 34541166 - PG1499 - hypothetical protein 1287 52.23 0 1576239..1578530 + 763 34541167 - PG1500 - hypothetical protein 1288 35.83 -2 1578590..1579189 - 199 34541168 - PG1501 - TetR family transcriptional regulator 1289 36.38 -2 1580365..1581315 + 316 34541169 - PG1503 - LytB-related protein 1290 34.45 -2 1581333..1582319 + 328 34541170 - PG1504 - NAD dependent protein 1291 36.63 -2 1582383..1583261 + 292 34541171 - PG1505 - radical SAM domain-containing protein 1292 46.26 0 1583760..1586189 + 809 34541172 - PG1507 - hypothetical protein 1293 43.72 -1 1586200..1586748 + 182 34541173 - PG1508 - hypothetical protein 1294 43.65 -1 1586831..1587499 + 222 34541174 - PG1509 - HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 1295 39.81 -1 1587519..1587626 - 35 34541175 - PG1510 - hypothetical protein 1296 45.06 0 1587749..1587910 + 53 34541176 - PG1511 - hypothetical protein 1297 41.91 -1 1587903..1588520 - 205 34541177 - PG1512 - hypothetical protein 1298 36.98 -2 1588609..1589925 + 438 34541178 - PG1513 - phosphoribosyltransferase, putative/phosphoglycerate mutase family protein 1299 36.46 -2 1589940..1590929 + 329 34541179 - PG1514 - glycerol dehydrogenase-related protein 1300 34.42 -2 1590917..1591930 + 337 34541180 - PG1515 - ribulose bisphosphate carboxylase-related protein 1301 31.30 -2 1591881..1593257 + 458 34541181 - PG1516 - hypothetical protein 1302 30.65 -2 1595845..1597485 + 546 34541182 - PG1519 - hypothetical protein 1303 52.29 0 1598144..1599193 - 349 34541183 - PG1521 - O-succinylbenzoic acid--CoA ligase 1304 53.22 0 1599190..1600260 - 356 34541184 - PG1522 - mandelate racemase/muconate lactonizing enzyme family protein 1305 50.92 0 1600260..1601078 - 272 34541185 menB PG1523 - naphthoate synthase 1306 52.08 0 1601103..1602836 - 577 34541186 menD PG1524 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1307 51.22 0 1602849..1603955 - 368 34541187 - PG1525 - isochorismate synthase, putative 1308 43.68 -1 1604022..1605461 - 479 34541188 - PG1526 - hypothetical protein 1309 35.53 -2 1605657..1605884 - 75 34541189 - PG1527 - hypothetical protein 1310 41.25 -1 1605923..1607248 + 441 34541190 - PG1528 - hypothetical protein 1311 32.07 -2 1607375..1609513 + 712 34541191 - PG1529 - hypothetical protein 1312 32.55 -2 1609510..1610400 + 296 34541192 - PG1530 - hypothetical protein 1313 37.44 -2 1611612..1611806 - 64 34541193 - PG1532 - hypothetical protein 1314 43.14 -1 1611803..1613851 - 682 34541194 - PG1533 - TOPRIM domain-containing protein 1315 45.90 0 1613848..1614237 - 129 34541195 - PG1534 - hypothetical protein 1316 43.27 -1 1614240..1614581 - 113 34541196 - PG1535 - transcriptional regulator, putative 1317 49.10 0 1616502..1617389 + 295 34541197 - PG1536 - cell division protein FtsX, putative 1318 45.00 0 1617364..1617663 + 99 34541198 - PG1537 - hypothetical protein 1319 49.23 0 1617771..1618613 + 280 34541199 - PG1538 - undecaprenol kinase, putative 1320 48.24 0 1619417..1620469 + 350 34541200 queA PG1540 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1321 51.33 0 1620466..1620915 + 149 34541201 folK PG1541 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1322 49.96 0 1620928..1622172 + 414 34541202 prtC PG1542 - collagenase 1323 48.10 0 1622228..1622647 + 139 34541203 - PG1543 - thioesterase family protein 1324 49.16 0 1622732..1623502 + 256 34541204 yaaA PG1544 - hypothetical protein 1325 49.31 0 1623640..1624215 + 191 34541205 sodB PG1545 - superoxide dismutase, Fe-Mn 1326 40.21 -1 1624227..1624415 + 62 34541206 - PG1546 - hypothetical protein 1327 41.24 -1 1624402..1624755 + 117 34541207 - PG1547 - hypothetical protein 1328 42.55 -1 1627897..1628037 - 46 34541208 - PG1549 - hypothetical protein 1329 47.09 0 1628578..1629006 + 142 34541209 hmuY PG1551 - hmuY protein 1330 46.63 0 1629021..1630961 + 646 34541210 hmuR PG1552 - TonB-dependent receptor HmuR 1331 51.47 0 1630998..1635407 + 1469 34541211 - PG1553 - CobN/magnesium chelatase family protein 1332 55.75 +1 1635404..1636081 + 225 34541212 - PG1554 - hypothetical protein 1333 56.99 +1 1636151..1636729 + 192 34541213 - PG1555 - hypothetical protein 1334 51.68 0 1636735..1637061 + 108 34541214 - PG1556 - hypothetical protein 1335 51.42 0 1637994..1639082 - 362 34541215 gcvT PG1559 - glycine cleavage system aminomethyltransferase T 1336 50.05 0 1639157..1640221 - 354 34541216 rfbB PG1560 - dTDP-glucose 4,6-dehydratase 1337 49.18 0 1640228..1641085 - 285 34541217 rfbD PG1561 - dTDP-4-dehydrorhamnose reductase 1338 46.53 0 1641082..1641672 - 196 34541218 rfbC PG1562 - dTDP-4-dehydrorhamnose 3,5-epimerase 1339 50.11 0 1641687..1642556 - 289 34541219 rfbA PG1563 - glucose-1-phosphate thymidylyltransferase 1340 48.52 0 1642671..1644626 - 651 34541220 - PG1564 - hypothetical protein 1341 50.52 0 1644711..1645949 - 412 34541221 - PG1565 - 3-deoxy-D-manno-octulosonic-acid transferase, putative 1342 52.24 0 1645974..1647491 - 505 34541222 gltX PG1566 - glutamyl-tRNA synthetase 1343 48.96 0 1648672..1649055 - 127 34541223 - PG1570 - rhodanese-like domain-containing protein 1344 52.68 0 1649028..1650443 - 471 34541224 - PG1571 - metallo-beta-lactamase superfamily protein 1345 52.42 0 1650536..1651342 - 268 34541225 - PG1572 - hypothetical protein 1346 45.07 0 1651407..1652258 - 283 34541226 - PG1573 - Crp family transcriptional regulator 1347 46.41 0 1652551..1652703 - 50 34541227 - PG1574 - hypothetical protein 1348 52.92 0 1653156..1654712 + 518 34541228 nadB PG1576 - L-aspartate oxidase 1349 50.85 0 1654759..1655586 + 275 34541229 nadC PG1577 - nicotinate-nucleotide pyrophosphorylase 1350 49.73 0 1655606..1656532 + 308 34541230 nadA PG1578 - quinolinate synthetase 1351 48.19 0 1656633..1657628 + 331 34541231 - PG1579 - MoxR family ATPase 1352 49.37 0 1657639..1658511 + 290 34541232 - PG1580 - hypothetical protein 1353 46.60 0 1658508..1659464 + 318 34541233 - PG1581 - hypothetical protein 1354 47.46 0 1659461..1660444 + 327 34541234 batA PG1582 - batA protein 1355 46.86 0 1660455..1661474 + 339 34541235 batB PG1583 - batB protein 1356 47.45 0 1661471..1662214 + 247 34541236 batC PG1584 - batC protein 1357 48.03 0 1662395..1664197 + 600 34541237 batD PG1585 - batD protein 1358 50.61 0 1664194..1665102 + 302 34541238 batE PG1586 - batE protein 1359 46.16 0 1665123..1665839 + 238 34541239 - PG1587 - PAP2 superfamily protein 1360 51.82 0 1665855..1666622 - 255 34541240 - PG1588 - hypothetical protein 1361 55.91 +1 1666683..1667528 - 281 34541241 folP PG1589 - dihydropteroate synthase 1362 35.97 -2 1668057..1669154 + 365 34541242 - PG1591 - hypothetical protein 1363 49.06 0 1669523..1671595 + 690 34541243 - PG1592 - HDIG domain-containing protein 1364 52.58 0 1671643..1672203 + 186 34541244 aroK PG1593 - shikimate kinase 1365 55.27 +1 1672142..1673677 - 511 34541245 - PG1594 - ComEC/Rec2-related protein 1366 55.10 +1 1673684..1674340 - 218 34541246 rpe PG1595 - ribulose-phosphate 3-epimerase 1367 52.81 0 1674683..1678096 + 1137 34541247 ileS PG1596 - isoleucyl-tRNA synthetase 1368 48.82 0 1678166..1678546 + 126 34541248 - PG1597 - DnaK suppressor protein, putative 1369 47.43 0 1678550..1679230 + 226 34541249 - PG1598 - lipoprotein signal peptidase, putative 1370 47.53 0 1679227..1680015 + 262 34541250 - PG1599 - hypothetical protein 1371 46.20 0 1680049..1681074 - 341 34541251 - PG1600 - hypothetical protein 1372 50.90 0 1681109..1681882 - 257 34541252 - PG1601 - biotin--acetyl-CoA-carboxylase ligase 1373 48.82 0 1681854..1682234 - 126 34541253 - PG1602 - hypothetical protein 1374 48.38 0 1682305..1682889 + 194 34541254 - PG1603 - HAM1 protein 1375 50.88 0 1682877..1685207 + 776 34541255 - PG1604 - immunoreactive 84 kDa antigen PG93 1376 50.89 0 1685319..1686662 + 447 34541256 pepC PG1605 - aminopeptidase C 1377 36.51 -2 1686993..1687715 - 240 34541257 - PG1606 - ion transporter 1378 49.83 0 1688775..1689926 - 383 34541258 mmdB PG1608 - methylmalonyl-CoA decarboxylase, beta subunit 1379 46.90 0 1689931..1690365 - 144 34541259 mmdC PG1609 - methylmalonyl-CoA decarboxylase, gamma subunit 48.73 MEAN 4.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.