version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 951 65.61 0 937889..938833 + 314 119386508 - Pden_3801 - binding-protein-dependent transport systems inner membrane component 952 68.87 0 938830..939693 + 287 119386509 - Pden_3802 - binding-protein-dependent transport systems inner membrane component 953 70.26 0 939693..941363 + 556 119386510 - Pden_3803 - ABC transporter related 954 68.29 0 941360..942220 + 286 119386511 - Pden_3804 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 955 68.89 0 942233..942772 + 179 119386512 - Pden_3805 - carboxymuconolactone decarboxylase 956 66.67 0 942769..943281 - 170 119386513 - Pden_3806 - single-strand binding protein 957 68.67 0 943514..944161 + 215 119386514 - Pden_3807 - lytic transglycosylase, catalytic 958 68.76 0 944224..944796 - 190 119386515 - Pden_3808 - hypothetical protein 959 67.97 0 944867..945787 - 306 119386516 - Pden_3809 - delta-aminolevulinic acid dehydratase 960 70.14 0 945864..946583 + 239 119386517 - Pden_3810 - hypothetical protein 961 67.36 0 946626..950090 + 1154 119386518 - Pden_3811 - transcription-repair coupling factor 962 65.07 0 950384..952702 - 772 119386519 - Pden_3812 - ATP-dependent Clp protease, ATP-binding subunit clpA 963 68.94 0 952964..953710 - 248 119386520 - Pden_3813 - hydroxyacylglutathione hydrolase 964 72.92 +1 953762..954544 + 260 119386521 - Pden_3814 - methyltransferase type 11 965 66.04 0 954784..955419 + 211 119386522 - Pden_3815 - ATP synthase F1, delta subunit 966 65.10 0 955419..956954 + 511 119386523 - Pden_3816 - F0F1 ATP synthase subunit alpha 967 65.98 0 956967..957839 + 290 119386524 - Pden_3817 - F0F1 ATP synthase subunit gamma 968 65.05 0 957857..959281 + 474 119386525 - Pden_3818 - F0F1 ATP synthase subunit beta 969 67.34 0 959291..959737 + 148 119386526 - Pden_3819 - ATP synthase F1, epsilon subunit 970 64.39 0 959832..960182 + 116 119386527 - Pden_3820 - hypothetical protein 971 71.21 +1 960188..960958 - 256 119386528 - Pden_3821 - alpha/beta hydrolase fold 972 68.67 0 960955..961554 - 199 119386529 - Pden_3822 - DSBA oxidoreductase 973 64.80 0 961636..962655 + 339 119386530 - Pden_3823 - ribose-phosphate pyrophosphokinase 974 67.33 0 962723..963175 - 150 119386531 - Pden_3824 - CoA-binding domain-containing protein 975 65.46 0 963359..963772 - 137 119386532 - Pden_3825 - hypothetical protein 976 69.80 0 963873..964670 - 265 119386533 - Pden_3826 - RNA methyltransferase 977 58.14 -2 964815..965072 - 85 119386534 - Pden_3827 - hypothetical protein 978 61.19 -1 965152..966009 + 285 119386535 - Pden_3828 - hypothetical protein 979 66.59 0 966002..967363 + 453 119386536 - Pden_3829 - hypothetical protein 980 66.26 0 967468..967713 + 81 119386537 - Pden_3830 - CopG/Arc/MetJ family transcriptional regulator 981 61.46 -1 967710..967997 + 95 119386538 - Pden_3831 - plasmid stabilization system protein 982 64.69 0 968083..968589 + 168 119386539 - Pden_3832 - hypothetical protein 983 67.95 0 968814..969986 - 390 119386540 - Pden_3833 - hypothetical protein 984 63.74 0 970254..970937 + 227 119386541 - Pden_3834 - hypothetical protein 985 66.08 0 970940..971449 - 169 119386542 - Pden_3835 - hypothetical protein 986 63.89 0 971625..971948 - 107 119386543 - Pden_3836 - hypothetical protein 987 60.16 -1 972058..972303 + 81 119386544 - Pden_3837 - helix-turn-helix domain-containing protein 988 53.21 -2 972636..973571 + 311 119386545 - Pden_3838 - DNA methylase N-4/N-6 domain-containing protein 989 55.63 -2 973574..974044 + 156 119386546 - Pden_3839 - hypothetical protein 990 56.68 -2 974059..975390 + 443 119386547 - Pden_3840 - hypothetical protein 991 57.82 -2 975397..977307 + 636 119386548 - Pden_3841 - helicase domain-containing protein 992 54.00 -2 977304..978140 + 278 119386549 - Pden_3842 - hypothetical protein 993 61.04 -1 978209..978457 + 82 119386550 - Pden_3843 - hypothetical protein 994 62.59 -1 978675..979703 - 342 119386551 - Pden_3844 - transposase IS116/IS110/IS902 family protein 995 61.11 -1 979812..980135 + 107 119386552 - Pden_3845 - transposase IS3/IS911 family protein 996 62.25 -1 980135..981040 + 301 119386553 - Pden_3846 - integrase catalytic subunit 997 54.42 -2 981103..981894 - 263 119386554 - Pden_3847 - XRE family transcriptional regulator 998 59.18 -1 981969..982262 + 97 119386555 - Pden_3848 - hypothetical protein 999 61.82 -1 982462..983535 + 357 119386556 - Pden_3849 - phage integrase family protein 1000 55.13 -2 983791..984180 + 129 119386557 - Pden_3850 - hypothetical protein 1001 70.48 0 984185..986230 - 681 119386558 - Pden_3851 - hypothetical protein 1002 69.64 0 986350..987189 - 279 119386559 - Pden_3852 - hypothetical protein 1003 67.53 0 987193..987768 - 191 119386560 - Pden_3853 - hypothetical protein 1004 60.92 -1 988104..988364 + 86 119386561 - Pden_3854 - hypothetical protein 1005 63.68 0 988330..988797 - 155 119386562 - Pden_3855 - hypothetical protein 1006 64.56 0 988892..989887 + 331 119386563 - Pden_3856 - substrate-binding region of ABC-type glycine betaine transport system 1007 63.95 0 989964..990845 + 293 119386564 - Pden_3857 - binding-protein-dependent transport systems inner membrane component 1008 64.76 0 990842..991888 + 348 119386565 - Pden_3858 - ABC transporter related 1009 60.90 -1 991961..992359 + 132 119386566 - Pden_3859 - hypothetical protein 1010 71.27 +1 992416..993522 + 368 119386567 - Pden_3860 - NUDIX hydrolase 1011 67.05 0 993557..994588 + 343 119386568 - Pden_3861 - cysteine synthase A 1012 68.99 0 994597..997089 + 830 119386569 - Pden_3862 - MscS mechanosensitive ion channel 1013 66.93 0 997086..997472 + 128 119386570 - Pden_3863 - hypothetical protein 1014 66.67 0 997469..998539 - 356 119386571 - Pden_3864 - hypothetical protein 1015 66.89 0 998605..1001346 - 913 119386572 - Pden_3865 - DNA gyrase subunit A 1016 69.09 0 1001441..1001935 - 164 119386573 - Pden_3866 - disulphide bond formation protein DsbB 1017 63.65 0 1001988..1002584 - 198 119386574 - Pden_3867 - DedA family protein 1018 67.84 0 1002716..1003567 + 283 119386575 - Pden_3868 - zinc metallopeptidase putative 1019 67.72 0 1003738..1003926 - 62 119386576 - Pden_3869 - hypothetical protein 1020 63.80 0 1003986..1004438 + 150 119386577 - Pden_3870 - cyclase/dehydrase 1021 69.31 0 1004426..1005031 - 201 119386578 - Pden_3871 - hypothetical protein 1022 65.57 0 1005125..1006486 - 453 119386579 - Pden_3872 - glutamate dehydrogenase 1023 65.27 0 1006744..1008033 - 429 119386580 - Pden_3873 - crotonyl-CoA reductase 1024 71.48 +1 1008225..1009139 - 304 119386581 - Pden_3874 - hypothetical protein 1025 66.04 0 1009234..1011300 + 688 119386582 - Pden_3875 - methylmalonyl-CoA mutase, large subunit 1026 69.98 0 1011399..1012304 - 301 119386583 - Pden_3876 - hypothetical protein 1027 64.51 0 1012304..1012906 - 200 119386584 - Pden_3877 - uncharacterized peroxidase-related enzyme 1028 66.47 0 1013103..1014599 + 498 119386585 - Pden_3878 - signal recognition particle protein 1029 72.32 +1 1014604..1015134 + 176 119386586 - Pden_3879 - GCN5-related N-acetyltransferase 1030 65.81 0 1015131..1015481 + 116 119386587 - Pden_3880 - chorismate mutase 1031 66.13 0 1015531..1015905 + 124 119386588 rpsP Pden_3881 - 30S ribosomal protein S16 1032 66.67 0 1015905..1016408 + 167 119386589 - Pden_3882 - 16S rRNA processing protein RimM 1033 66.44 0 1016405..1017274 + 289 119386590 - Pden_3883 - tRNA (guanine-N1)-methyltransferase 1034 65.35 0 1017271..1017651 + 126 119386591 rplS Pden_3884 - 50S ribosomal protein L19 1035 59.46 -1 1017663..1017884 + 73 119386592 - Pden_3885 - ribosomal protein L31 1036 65.04 0 1018209..1018454 - 81 119386593 - Pden_3886 - hypothetical protein 1037 66.28 0 1018726..1019508 + 260 119386594 - Pden_3887 - chromosome partitioning protein 1038 72.99 +1 1019578..1020747 + 389 119386595 - Pden_3888 - Fis family transcriptional regulator 1039 66.60 0 1020744..1023800 + 1018 119386596 - Pden_3889 - acriflavin resistance protein 1040 67.20 0 1023906..1025210 - 434 119386597 - Pden_3890 - branched-chain alpha-keto acid dehydrogenase subunit E2 1041 66.01 0 1025223..1026593 - 456 119386598 - Pden_3891 - pyruvate dehydrogenase subunit beta 1042 62.69 0 1026606..1027637 - 343 119386599 - Pden_3892 - pyruvate dehydrogenase (acetyl-transferring) 1043 64.29 0 1027872..1028165 - 97 119386600 - Pden_3893 - septum formation initiator 1044 66.97 0 1028190..1029491 - 433 119386601 - Pden_3894 - succinyl-diaminopimelate desuccinylase 1045 61.35 -1 1029595..1029876 + 93 119386602 - Pden_3895 - hypothetical protein 1046 66.36 0 1029887..1030546 + 219 119386603 - Pden_3896 - hypothetical protein 1047 68.78 0 1030550..1031494 + 314 119386604 - Pden_3897 - deoxyribose-phosphate aldolase 1048 69.93 0 1031497..1033827 + 776 119386605 - Pden_3898 - aldehyde dehydrogenase 1049 66.40 0 1033911..1034666 - 251 119386606 - Pden_3899 - hydroxypyruvate isomerase 1050 64.65 0 1034669..1035214 - 181 119386607 - Pden_3900 - hypothetical protein 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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