version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 676 69.26 0 671140..672141 + 333 119386233 - Pden_3522 - periplasmic binding protein 677 73.00 +1 672138..673163 + 341 119386234 - Pden_3523 - transport system permease protein 678 72.05 +1 673166..674206 + 346 119386235 - Pden_3524 - transport system permease protein 679 71.64 +1 674203..675066 + 287 119386236 - Pden_3525 - ABC transporter related 680 69.05 0 675279..676580 - 433 119386237 - Pden_3526 - hypothetical protein 681 64.12 0 676659..678743 - 694 119386238 - Pden_3527 - TonB-dependent receptor 682 68.80 0 678951..679748 + 265 119386239 - Pden_3528 - regulatory proteins, IclR 683 70.24 0 679749..680531 - 260 119386240 - Pden_3529 - ABC transporter related 684 68.41 0 680760..681563 + 267 119386241 - Pden_3530 - siderophore-interacting protein 685 67.52 0 681573..682511 + 312 119386242 - Pden_3531 - iron-enterobactin transporter periplasmic binding protein 686 72.46 +1 682508..683215 + 235 119386243 - Pden_3532 - transport system permease protein 687 71.51 +1 683199..683549 + 116 119386244 - Pden_3533 - transport system permease protein 688 71.23 +1 683546..684598 + 350 119386245 - Pden_3534 - transport system permease protein 689 66.18 0 684676..685290 - 204 119386246 - Pden_3535 - glutathione S-transferase domain-containing protein 690 65.05 0 685290..686033 - 247 119386247 - Pden_3536 - GntR family transcriptional regulator 691 70.09 0 686155..686913 + 252 119386248 - Pden_3537 - short-chain dehydrogenase/reductase SDR 692 62.92 0 686930..687436 + 168 119386249 - Pden_3538 - TRAP dicarboxylate family transporter DctQ subunit 693 64.15 0 687446..688756 + 436 119386250 - Pden_3539 - TRAP dicarboxylate transporter, DctM subunit 694 64.25 0 688822..689940 + 372 119386251 - Pden_3540 - TRAP dicarboxylate transporter- DctP subunit 695 68.56 0 690013..690750 + 245 119386252 - Pden_3541 - short-chain dehydrogenase/reductase SDR 696 70.87 0 690766..691551 + 261 119386253 - Pden_3542 - short-chain dehydrogenase/reductase SDR 697 68.01 0 691538..693247 + 569 119386254 - Pden_3543 - fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 698 68.22 0 693244..693693 + 149 119386255 - Pden_3544 - hypothetical protein 699 68.70 0 693902..694393 + 163 119386256 - Pden_3545 - MarR family transcriptional regulator 700 71.06 +1 694390..694821 - 143 119386257 - Pden_3546 - MarR family transcriptional regulator 701 66.45 0 694964..696325 + 453 119386258 - Pden_3547 - homogentisate 1,2-dioxygenase 702 68.66 0 696400..697605 + 401 119386259 - Pden_3548 - fumarylacetoacetase 703 70.13 0 697602..698237 + 211 119386260 - Pden_3549 - maleylacetoacetate isomerase 704 68.35 0 698668..699378 + 236 119386261 - Pden_3550 - acylneuraminate cytidylyltransferase 705 69.53 0 699375..700421 + 348 119386262 - Pden_3551 - flagellin modification protein FlmD 706 66.22 0 700418..701539 + 373 119386263 - Pden_3552 - ATP-dependent carboxylate-amine ligase domain-containing protein 707 69.09 0 701536..702444 + 302 119386264 - Pden_3553 - NAD-dependent epimerase/dehydratase 708 58.21 -2 702466..704322 - 618 119386265 - Pden_3554 - hypothetical protein 709 63.42 0 704351..707368 - 1005 119386266 - Pden_3555 - hypothetical protein 710 65.09 0 707372..708448 - 358 119386267 - Pden_3556 - N-acylneuraminate-9-phosphate synthase 711 67.88 0 708579..709733 - 384 119386268 - Pden_3557 - DegT/DnrJ/EryC1/StrS aminotransferase 712 60.18 -1 709730..710731 - 333 119386269 - Pden_3558 - polysaccharide biosynthesis protein CapD 713 63.89 0 711428..711823 + 131 119386270 - Pden_3560 - putative transport transmembrane protein 714 62.59 -1 712270..713298 - 342 119386271 - Pden_3561 - transposase IS116/IS110/IS902 family protein 715 62.65 0 713407..713730 + 107 119386272 - Pden_3562 - transposase IS3/IS911 family protein 716 63.41 0 714938..715459 + 173 119386273 - Pden_3564 - hypothetical protein 717 67.19 0 715570..715953 + 127 119386274 - Pden_3565 - hypothetical protein 718 68.75 0 716125..716892 + 255 119386275 - Pden_3566 - two component transcriptional regulator 719 70.88 0 716868..717983 - 371 119386276 - Pden_3567 - response regulator receiver sensor signal transduction histidine kinase 720 69.75 0 717980..720604 - 874 119386277 - Pden_3568 - integral membrane sensor signal transduction histidine kinase 721 65.20 0 720832..722058 + 408 119386278 - Pden_3569 - formamidase 722 64.52 0 722119..722631 + 170 119386279 - Pden_3570 - AmiS/UreI transporter 723 70.03 0 722641..722937 + 98 119386280 - Pden_3571 - hypothetical protein 724 65.49 0 723093..723860 - 255 119386281 - Pden_3572 - short-chain dehydrogenase/reductase SDR 725 66.25 0 723857..724570 - 237 119386282 - Pden_3573 - GntR family transcriptional regulator 726 63.77 0 724667..725908 + 413 119386283 - Pden_3574 - hypothetical protein 727 63.81 0 725984..726859 + 291 119386284 - Pden_3575 - inner-membrane translocator 728 65.79 0 726867..729383 + 838 119386285 - Pden_3576 - ABC transporter related 729 71.47 +1 729392..730327 + 311 119386286 - Pden_3577 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 730 64.63 0 730346..731278 + 310 119386287 - Pden_3578 - hypothetical protein 731 65.83 0 731289..732599 + 436 119386288 - Pden_3579 - histidinol dehydrogenase 732 65.88 0 732596..733354 + 252 119386289 - Pden_3580 - short-chain dehydrogenase/reductase SDR 733 66.67 0 733447..733827 - 126 119386290 - Pden_3581 - hypothetical protein 734 65.53 0 733985..734776 - 263 119386291 - Pden_3582 - response regulator receiver protein 735 67.74 0 734835..735674 + 279 119386292 - Pden_3583 - short-chain dehydrogenase/reductase SDR 736 64.07 0 735702..736973 + 423 119386293 - Pden_3584 - FAD-linked oxidoreductase 737 62.74 0 737038..738234 + 398 119386294 - Pden_3585 - ethanolamine utilisation protein, EutH 738 67.03 0 738420..739511 - 363 119386295 - Pden_3586 - transglutaminase domain-containing protein 739 67.36 0 739698..740423 - 241 119386296 - Pden_3587 - hypothetical protein 740 67.15 0 740435..741883 - 482 119386297 - Pden_3588 - amidohydrolase 741 58.25 -2 741907..742203 - 98 119386298 - Pden_3589 - hypothetical protein 742 55.95 -2 742380..742631 - 83 119386299 - Pden_3590 - hypothetical protein 743 64.97 0 742686..742979 + 97 119386300 - Pden_3591 - addiction module antitoxin 744 61.59 -1 742972..743247 + 91 119386301 - Pden_3592 - addiction module antitoxin 745 65.68 0 743455..744669 - 404 119386302 - Pden_3593 - transposase IS66 746 66.38 0 745050..745397 - 115 119386303 - Pden_3595 - IS66 Orf2 family protein 747 61.30 -1 745691..747589 + 632 119386304 - Pden_3596 - phage tape measure protein 748 64.25 0 747589..748251 + 220 119386305 - Pden_3597 - hypothetical protein 749 64.44 0 748251..748835 + 194 119386306 - Pden_3598 - hypothetical protein 750 52.87 -2 748845..749105 - 86 119386307 - Pden_3599 - hypothetical protein 751 65.66 0 749213..749608 + 131 119386308 - Pden_3600 - hypothetical protein 752 64.41 0 749608..751692 + 694 119386309 - Pden_3601 - fibronectin, type III domain-containing protein 753 60.93 -1 751752..753809 + 685 119386310 - Pden_3602 - hypothetical protein 754 54.01 -2 753875..754198 + 107 119386311 - Pden_3603 - hypothetical protein 755 65.24 0 754198..757080 + 960 119386312 - Pden_3604 - hypothetical protein 756 63.83 0 757105..757386 + 93 119386313 - Pden_3605 - hypothetical protein 757 66.79 0 757589..758383 + 264 119386314 - Pden_3606 - peptidoglycan binding domain-containing protein 758 63.70 0 759034..759303 - 89 119386315 - Pden_3607 - hypothetical protein 759 66.67 0 759414..759689 - 91 119386316 - Pden_3608 - hypothetical protein 760 64.68 0 760497..762914 - 805 119386317 - Pden_3609 - ATP-dependent protease La 761 52.74 -2 763116..763316 - 66 119386318 - Pden_3610 - CsbD family protein 762 69.22 0 764201..765376 + 391 119386319 - Pden_3611 - hypothetical protein 763 66.30 0 765426..768389 - 987 119386320 ileS Pden_3612 - isoleucyl-tRNA synthetase 764 73.40 +1 768541..769713 + 390 119386321 - Pden_3613 - monooxygenase, FAD-binding 765 70.69 0 769733..770155 + 140 119386322 - Pden_3614 - hypothetical protein 766 66.05 0 770204..770527 + 107 119386323 - Pden_3615 - glyoxalase/bleomycin resistance protein/dioxygenase 767 70.14 0 770524..771156 - 210 119386324 - Pden_3616 - hypothetical protein 768 68.16 0 771153..771620 - 155 119386325 - Pden_3617 - ribonuclease H 769 67.99 0 771617..772222 - 201 119386326 - Pden_3618 - glutathione S-transferase domain-containing protein 770 68.77 0 772316..773266 - 316 119386327 - Pden_3619 - hydroxymethylbutenyl pyrophosphate reductase 771 68.62 0 773306..773869 - 187 119386328 - Pden_3620 - adenine phosphoribosyltransferase 772 68.63 0 773869..774531 - 220 119386329 - Pden_3621 - hypothetical protein 773 70.59 0 774687..775247 + 186 119386330 - Pden_3622 - GCN5-related N-acetyltransferase 774 71.05 +1 775235..775804 - 189 119386331 - Pden_3623 - vertebrate C-lysozyme inhibitor 775 70.70 0 775896..776762 + 288 119386332 - Pden_3624 - hypothetical protein 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0