version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 637 70.46 0 629588..630667 + 359 119386194 - Pden_3483 - dihydroorotate dehydrogenase 638 63.56 0 630664..631563 + 299 119386195 - Pden_3484 - hypothetical protein 639 70.93 +1 631560..632309 + 249 119386196 - Pden_3485 - HpcH/HpaI aldolase 640 67.88 0 632340..633242 + 300 119386197 - Pden_3486 - hypothetical protein 641 68.24 0 633436..634008 - 190 119386198 - Pden_3487 - MarR family transcriptional regulator 642 67.92 0 634065..635972 + 635 119386199 - Pden_3488 - phenol 2-monooxygenase 643 69.18 0 635969..636961 - 330 119386200 - Pden_3489 - LysR family transcriptional regulator 644 65.64 0 637053..638222 + 389 119386201 - Pden_3490 - 4-hydroxybenzoate 3-monooxygenase 645 71.61 +1 638222..639010 + 262 119386202 - Pden_3491 - 3-oxoadipate enol-lactonase 646 67.36 0 639003..639434 + 143 119386203 - Pden_3492 - 4-carboxymuconolactone decarboxylase 647 64.87 0 639431..640153 + 240 119386204 - Pden_3493 - protocatechuate 3,4-dioxygenase, beta subunit 648 67.23 0 640153..640863 + 236 119386205 - Pden_3494 - protocatechuate 3,4-dioxygenase, alpha subunit 649 67.38 0 640856..641701 + 281 119386206 - Pden_3495 - hypothetical protein 650 74.50 +1 641701..643002 + 433 119386207 - Pden_3496 - fumarate lyase 651 67.74 0 643024..644049 + 341 119386208 - Pden_3497 - TRAP dicarboxylate transporter- DctP subunit 652 65.13 0 644067..644588 + 173 119386209 - Pden_3498 - hypothetical protein 653 65.53 0 644585..645904 + 439 119386210 - Pden_3499 - TRAP dicarboxylate transporter, DctM subunit 654 65.89 0 645946..646842 - 298 119386211 - Pden_3500 - LysR family transcriptional regulator 655 66.67 0 646964..647896 + 310 119386212 - Pden_3501 - glyoxalase/bleomycin resistance protein/dioxygenase 656 67.46 0 647954..648583 + 209 119386213 - Pden_3502 - RC150 657 62.25 -1 648580..648828 + 82 119386214 - Pden_3503 - hypothetical protein 658 64.35 0 648874..649563 + 229 119386215 - Pden_3504 - isochorismatase hydrolase 659 63.37 0 649884..650186 + 100 119386216 - Pden_3505 - hypothetical protein 660 66.21 0 650236..650454 + 72 119386217 - Pden_3506 - DoxX 661 67.80 0 650698..652557 + 619 119386218 - Pden_3507 - amidohydrolase 3 662 70.59 0 652649..654229 + 526 119386219 - Pden_3508 - protein of unknown function DUF894, DitE 663 64.89 0 654270..654662 + 130 119386220 - Pden_3509 - DoxX family protein 664 69.10 0 654707..655651 + 314 119386221 - Pden_3510 - pirin domain-containing protein 665 68.71 0 655815..656942 - 375 119386222 - Pden_3511 - hypothetical protein 666 66.67 0 656939..657409 - 156 119386223 - Pden_3512 - MarR family transcriptional regulator 667 65.26 0 657528..658811 + 427 119386224 - Pden_3513 - LysR family transcriptional regulator 668 67.97 0 658965..660347 + 460 119386225 - Pden_3514 - allantoinase 669 68.60 0 660347..661585 + 412 119386226 - Pden_3515 - allantoate amidohydrolase 670 66.39 0 661587..662678 + 363 119386227 - Pden_3516 - hypothetical protein 671 66.97 0 662681..664339 + 552 119386228 - Pden_3517 - urocanate hydratase 672 66.37 0 664452..665795 + 447 119386229 - Pden_3518 - major facilitator transporter 673 66.79 0 665822..667486 + 554 119386230 - Pden_3519 - phenylalanine/histidine ammonia-lyase 674 67.80 0 667754..668722 + 322 119386231 - Pden_3520 - helix-turn-helix domain-containing protein 675 64.76 0 668767..670866 - 699 119386232 - Pden_3521 - TonB-dependent siderophore receptor 676 69.26 0 671140..672141 + 333 119386233 - Pden_3522 - periplasmic binding protein 677 73.00 +1 672138..673163 + 341 119386234 - Pden_3523 - transport system permease protein 678 72.05 +1 673166..674206 + 346 119386235 - Pden_3524 - transport system permease protein 679 71.64 +1 674203..675066 + 287 119386236 - Pden_3525 - ABC transporter related 680 69.05 0 675279..676580 - 433 119386237 - Pden_3526 - hypothetical protein 681 64.12 0 676659..678743 - 694 119386238 - Pden_3527 - TonB-dependent receptor 682 68.80 0 678951..679748 + 265 119386239 - Pden_3528 - regulatory proteins, IclR 683 70.24 0 679749..680531 - 260 119386240 - Pden_3529 - ABC transporter related 684 68.41 0 680760..681563 + 267 119386241 - Pden_3530 - siderophore-interacting protein 685 67.52 0 681573..682511 + 312 119386242 - Pden_3531 - iron-enterobactin transporter periplasmic binding protein 686 72.46 +1 682508..683215 + 235 119386243 - Pden_3532 - transport system permease protein 687 71.51 +1 683199..683549 + 116 119386244 - Pden_3533 - transport system permease protein 688 71.23 +1 683546..684598 + 350 119386245 - Pden_3534 - transport system permease protein 689 66.18 0 684676..685290 - 204 119386246 - Pden_3535 - glutathione S-transferase domain-containing protein 690 65.05 0 685290..686033 - 247 119386247 - Pden_3536 - GntR family transcriptional regulator 691 70.09 0 686155..686913 + 252 119386248 - Pden_3537 - short-chain dehydrogenase/reductase SDR 692 62.92 0 686930..687436 + 168 119386249 - Pden_3538 - TRAP dicarboxylate family transporter DctQ subunit 693 64.15 0 687446..688756 + 436 119386250 - Pden_3539 - TRAP dicarboxylate transporter, DctM subunit 694 64.25 0 688822..689940 + 372 119386251 - Pden_3540 - TRAP dicarboxylate transporter- DctP subunit 695 68.56 0 690013..690750 + 245 119386252 - Pden_3541 - short-chain dehydrogenase/reductase SDR 696 70.87 0 690766..691551 + 261 119386253 - Pden_3542 - short-chain dehydrogenase/reductase SDR 697 68.01 0 691538..693247 + 569 119386254 - Pden_3543 - fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 698 68.22 0 693244..693693 + 149 119386255 - Pden_3544 - hypothetical protein 699 68.70 0 693902..694393 + 163 119386256 - Pden_3545 - MarR family transcriptional regulator 700 71.06 +1 694390..694821 - 143 119386257 - Pden_3546 - MarR family transcriptional regulator 701 66.45 0 694964..696325 + 453 119386258 - Pden_3547 - homogentisate 1,2-dioxygenase 702 68.66 0 696400..697605 + 401 119386259 - Pden_3548 - fumarylacetoacetase 703 70.13 0 697602..698237 + 211 119386260 - Pden_3549 - maleylacetoacetate isomerase 704 68.35 0 698668..699378 + 236 119386261 - Pden_3550 - acylneuraminate cytidylyltransferase 705 69.53 0 699375..700421 + 348 119386262 - Pden_3551 - flagellin modification protein FlmD 706 66.22 0 700418..701539 + 373 119386263 - Pden_3552 - ATP-dependent carboxylate-amine ligase domain-containing protein 707 69.09 0 701536..702444 + 302 119386264 - Pden_3553 - NAD-dependent epimerase/dehydratase 708 58.21 -2 702466..704322 - 618 119386265 - Pden_3554 - hypothetical protein 709 63.42 0 704351..707368 - 1005 119386266 - Pden_3555 - hypothetical protein 710 65.09 0 707372..708448 - 358 119386267 - Pden_3556 - N-acylneuraminate-9-phosphate synthase 711 67.88 0 708579..709733 - 384 119386268 - Pden_3557 - DegT/DnrJ/EryC1/StrS aminotransferase 712 60.18 -1 709730..710731 - 333 119386269 - Pden_3558 - polysaccharide biosynthesis protein CapD 713 63.89 0 711428..711823 + 131 119386270 - Pden_3560 - putative transport transmembrane protein 714 62.59 -1 712270..713298 - 342 119386271 - Pden_3561 - transposase IS116/IS110/IS902 family protein 715 62.65 0 713407..713730 + 107 119386272 - Pden_3562 - transposase IS3/IS911 family protein 716 63.41 0 714938..715459 + 173 119386273 - Pden_3564 - hypothetical protein 717 67.19 0 715570..715953 + 127 119386274 - Pden_3565 - hypothetical protein 718 68.75 0 716125..716892 + 255 119386275 - Pden_3566 - two component transcriptional regulator 719 70.88 0 716868..717983 - 371 119386276 - Pden_3567 - response regulator receiver sensor signal transduction histidine kinase 720 69.75 0 717980..720604 - 874 119386277 - Pden_3568 - integral membrane sensor signal transduction histidine kinase 721 65.20 0 720832..722058 + 408 119386278 - Pden_3569 - formamidase 722 64.52 0 722119..722631 + 170 119386279 - Pden_3570 - AmiS/UreI transporter 723 70.03 0 722641..722937 + 98 119386280 - Pden_3571 - hypothetical protein 724 65.49 0 723093..723860 - 255 119386281 - Pden_3572 - short-chain dehydrogenase/reductase SDR 725 66.25 0 723857..724570 - 237 119386282 - Pden_3573 - GntR family transcriptional regulator 726 63.77 0 724667..725908 + 413 119386283 - Pden_3574 - hypothetical protein 727 63.81 0 725984..726859 + 291 119386284 - Pden_3575 - inner-membrane translocator 728 65.79 0 726867..729383 + 838 119386285 - Pden_3576 - ABC transporter related 729 71.47 +1 729392..730327 + 311 119386286 - Pden_3577 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 730 64.63 0 730346..731278 + 310 119386287 - Pden_3578 - hypothetical protein 731 65.83 0 731289..732599 + 436 119386288 - Pden_3579 - histidinol dehydrogenase 732 65.88 0 732596..733354 + 252 119386289 - Pden_3580 - short-chain dehydrogenase/reductase SDR 733 66.67 0 733447..733827 - 126 119386290 - Pden_3581 - hypothetical protein 734 65.53 0 733985..734776 - 263 119386291 - Pden_3582 - response regulator receiver protein 735 67.74 0 734835..735674 + 279 119386292 - Pden_3583 - short-chain dehydrogenase/reductase SDR 736 64.07 0 735702..736973 + 423 119386293 - Pden_3584 - FAD-linked oxidoreductase 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0