version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 467 67.06 0 471872..472897 - 341 119386024 - Pden_3307 - transposase IS66 468 63.28 0 472952..473305 - 117 119386025 - Pden_3308 - IS66 Orf2 family protein 469 66.07 0 473299..473631 - 110 119386026 - Pden_3309 - transposase IS3/IS911 family protein 470 63.64 0 473734..474063 + 109 119386027 - Pden_3310 - hypothetical protein 471 62.63 0 474208..475173 - 321 119386028 - Pden_3311 - response regulator receiver protein 472 62.48 -1 475170..476507 - 445 119386029 - Pden_3312 - integral membrane sensor signal transduction histidine kinase 473 59.21 -1 476504..476986 - 160 119386030 - Pden_3313 - hypothetical protein 474 62.50 -1 477123..477602 + 159 119386031 - Pden_3314 - hypothetical protein 475 60.21 -1 477604..478176 + 190 119386032 - Pden_3315 - hypothetical protein 476 63.12 0 478185..478664 + 159 119386033 - Pden_3316 - hypothetical protein 477 63.07 0 478661..479188 + 175 119386034 - Pden_3317 - hypothetical protein 478 62.29 -1 479185..479709 + 174 119386035 - Pden_3318 - hypothetical protein 479 63.07 0 479733..480704 + 323 119386036 - Pden_3319 - hypothetical protein 480 65.26 0 480701..483268 + 855 119386037 - Pden_3320 - von Willebrand factor, type A 481 55.12 -2 483265..483801 + 178 119386038 - Pden_3321 - hypothetical protein 482 60.08 -1 483798..484283 + 161 119386039 - Pden_3322 - hypothetical protein 483 64.64 0 484311..484901 + 196 119386040 - Pden_3323 - hypothetical protein 484 57.02 -2 484910..485728 + 272 119386041 - Pden_3324 - type III restriction enzyme, res subunit 485 56.85 -2 485821..488112 + 763 119386042 - Pden_3325 - hypothetical protein 486 65.01 0 488297..490102 - 601 119386043 - Pden_3326 - recombinase 487 69.33 0 490103..490552 + 149 119386044 - Pden_3327 - hypothetical protein 488 68.55 0 492010..492963 + 317 119386045 - Pden_3330 - AraC-like transcriptional regulator 489 54.32 -2 493215..493538 + 107 119386046 - Pden_3331 - hypothetical protein 490 50.06 -2 493535..494413 + 292 119386047 - Pden_3332 - XRE family plasmid maintenance system antidote protein 491 62.57 -1 494397..494957 - 186 119386048 - Pden_3333 - transposase, IS4 family protein 492 61.17 -1 495252..495524 + 90 119386049 - Pden_3334 - hypothetical protein 493 60.93 -1 495620..495898 - 92 119386050 - Pden_3335 - SH3 type 3 domain-containing protein 494 61.90 -1 495960..496316 + 118 119386051 - Pden_3336 - hypothetical protein 495 67.18 0 496474..497838 - 454 119386052 - Pden_3337 - chromate transporter 496 68.09 0 497835..498680 - 281 119386053 - Pden_3338 - rhodanese domain-containing protein 497 66.95 0 498895..499602 - 235 119386054 - Pden_3339 - NADPH-dependent FMN reductase 498 66.11 0 499599..500675 - 358 119386055 - Pden_3340 - arsenical-resistance protein 499 67.71 0 500685..501638 - 317 119386056 - Pden_3341 - arsenate reductase 500 69.42 0 501631..501993 - 120 119386057 - Pden_3342 - regulatory protein, ArsR 501 63.92 0 502687..504177 - 496 119386058 - Pden_3344 - sulphate transporter 502 68.18 0 504673..504870 + 65 119386059 - Pden_3345 - hypothetical protein 503 67.08 0 505006..505248 + 80 119386060 - Pden_3346 - hypothetical protein 504 65.69 0 505270..505680 + 136 119386061 - Pden_3347 - glyoxalase/bleomycin resistance protein/dioxygenase 505 66.67 0 505686..506120 + 144 119386062 - Pden_3348 - methyltransferase type 12 506 63.21 0 506216..506533 + 105 119386063 - Pden_3349 - histone family protein nucleoid-structuring protein H-NS 507 66.34 0 506549..507166 + 205 119386064 - Pden_3350 - plasmid pRiA4b ORF-3 family protein 508 64.73 0 507323..508096 - 257 119386065 - Pden_3351 - methyltransferase type 11 509 66.30 0 508181..508453 + 90 119386066 - Pden_3352 - hypothetical protein 510 67.71 0 508469..509425 + 318 119386067 - Pden_3353 - cation diffusion facilitator family transporter 511 65.33 0 509433..509882 + 149 119386068 - Pden_3354 - hypothetical protein 512 63.83 0 509912..510370 + 152 119386069 - Pden_3355 - gentamicin 3'-N-acetyltransferase 513 64.27 0 510604..511020 + 138 119386070 - Pden_3356 - hypothetical protein 514 66.22 0 511449..512126 + 225 119386071 - Pden_3357 - DNA methylase N-4/N-6 domain-containing protein 515 68.38 0 512201..512491 + 96 119386072 - Pden_3358 - hypothetical protein 516 61.04 -1 512788..513231 + 147 119386073 - Pden_3359 - hypothetical protein 517 68.78 0 513239..513475 - 78 119386074 - Pden_3360 - hypothetical protein 518 66.42 0 513986..514396 + 136 119386075 - Pden_3361 - single-strand binding protein 519 62.25 -1 514440..514847 + 135 119386076 - Pden_3362 - hypothetical protein 520 61.76 -1 514954..515157 + 67 119386077 - Pden_3363 - hypothetical protein 521 63.85 0 515762..515974 + 70 119386078 - Pden_3364 - hypothetical protein 522 68.27 0 515995..516369 - 124 119386079 - Pden_3365 - hypothetical protein 523 66.67 0 516539..516805 - 88 119386080 - Pden_3366 - hypothetical protein 524 67.05 0 516952..517215 - 87 119386081 - Pden_3367 - hypothetical protein 525 63.71 0 517401..517637 - 78 119386082 - Pden_3368 - XRE family transcriptional regulator 526 67.41 0 517829..518098 + 89 119386083 - Pden_3369 - hypothetical protein 527 67.36 0 518095..518964 + 289 119386084 - Pden_3370 - putative replication protein A 528 68.06 0 519220..519720 + 166 119386085 - Pden_3371 - hypothetical protein 529 68.19 0 519717..521225 + 502 119386086 - Pden_3372 - C-5 cytosine-specific DNA methylase 530 70.55 0 521222..521788 + 188 119386087 - Pden_3373 - conjugal transfer protein precursor 531 65.18 0 521824..522159 + 111 119386088 - Pden_3374 - hypothetical protein 532 69.60 0 522163..522981 + 272 119386089 - Pden_3375 - lytic transglycosylase, catalytic 533 68.21 0 523031..523612 + 193 119386090 - Pden_3376 - hypothetical protein 534 70.00 0 523854..525593 + 579 119386091 - Pden_3377 - hypothetical protein 535 69.05 0 525662..525913 + 83 119386092 - Pden_3378 - prevent-host-death family protein 536 65.52 0 525917..526351 + 144 119386093 - Pden_3379 - PilT domain-containing protein 537 55.16 -2 526562..526813 - 83 119386094 - Pden_3380 - hypothetical protein 538 64.79 0 526818..527030 + 70 119386095 - Pden_3381 - helix-turn-helix domain-containing protein 539 62.39 -1 527269..527922 - 217 119386096 - Pden_3382 - class II aldolase/adducin family protein 540 67.38 0 527919..529178 - 419 119386097 - Pden_3383 - type III effector Hrp-dependent outers 541 62.05 -1 529196..530473 - 425 119386098 - Pden_3384 - TRAP dicarboxylate transporter, DctM subunit 542 62.03 -1 530470..531030 - 186 119386099 - Pden_3385 - tripartite ATP-independent periplasmic transporter DctQ 543 64.73 0 531027..531698 - 223 119386100 - Pden_3386 - cyclase family protein 544 63.00 0 531715..532722 - 335 119386101 - Pden_3387 - TRAP dicarboxylate transporter, DctP subunit 545 65.81 0 532760..534163 - 467 119386102 - Pden_3388 - SAF domain-containing protein 546 61.31 -1 534444..535115 + 223 119386103 - Pden_3389 - GntR family transcriptional regulator 547 65.62 0 535370..538231 - 953 119386104 - Pden_3390 - hypothetical protein 548 63.58 0 538268..539467 - 399 119386105 - Pden_3391 - hypothetical protein 549 61.44 -1 539614..539919 - 101 119386106 - Pden_3392 - hypothetical protein 550 64.76 0 540885..541514 + 209 119386107 - Pden_3395 - putative transposase 551 64.49 0 541860..542732 - 290 119386108 - Pden_3396 - LysR family transcriptional regulator 552 63.14 0 542800..543111 + 103 119386109 - Pden_3397 - hypothetical protein 553 66.67 0 543498..543977 + 159 119386110 - Pden_3398 - twin-arginine translocation pathway signal 554 66.19 0 543983..544609 + 208 119386111 - Pden_3399 - ferric reductase domain-containing protein 555 66.89 0 544753..545640 - 295 119386112 - Pden_3400 - molybdenum cofactor synthesis domain-containing protein 556 63.64 0 545967..546131 + 54 119386113 - Pden_3401 - transposase, IS4 557 70.80 0 546172..547575 - 467 119386114 - Pden_3402 - integral membrane sensor signal transduction histidine kinase 558 71.06 +1 547568..548272 - 234 119386115 - Pden_3403 - two component transcriptional regulator 559 67.31 0 548443..549684 + 413 119386116 - Pden_3404 - extracellular solute-binding protein 560 61.51 -1 549751..550623 + 290 119386117 - Pden_3405 - binding-protein-dependent transport systems inner membrane component 561 61.61 -1 550613..551482 + 289 119386118 - Pden_3406 - binding-protein-dependent transport systems inner membrane component 562 65.85 0 551486..552592 + 368 119386119 - Pden_3407 - ABC transporter related 563 50.96 -2 552977..553237 + 86 119386120 - Pden_3408 - hypothetical protein 564 63.33 0 553476..554615 + 379 119386121 - Pden_3409 - creatinase 565 65.16 0 554677..555207 - 176 119386122 - Pden_3410 - hypothetical protein 566 64.29 0 555233..556117 - 294 119386123 - Pden_3411 - hypothetical protein 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0