version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 212 63.17 0 225122..225607 - 161 119385769 - Pden_3047 - MarR family transcriptional regulator 213 67.85 0 225654..227174 + 506 119385770 - Pden_3048 - hypothetical protein 214 64.89 0 228088..229941 + 617 119385771 - Pden_3049 - transketolase, central region 215 60.32 -1 229941..230696 + 251 119385772 - Pden_3050 - regulatory proteins, IclR 216 58.15 -2 230709..231107 + 132 119385773 - Pden_3051 - endoribonuclease L-PSP 217 64.01 0 231104..232495 + 463 119385774 - Pden_3052 - aminotransferase class-III 218 65.62 0 232485..233912 + 475 119385775 - Pden_3053 - amidase 219 62.53 -1 233971..235251 + 426 119385776 - Pden_3054 - branched-chain amino acid ABC transporter 220 64.45 0 235254..236066 + 270 119385777 - Pden_3055 - ABC transporter related 221 63.59 0 236056..236769 + 237 119385778 - Pden_3056 - ABC transporter related 222 61.21 -1 236773..237651 + 292 119385779 - Pden_3057 - inner-membrane translocator 223 59.00 -1 237648..238664 + 338 119385780 - Pden_3058 - inner-membrane translocator 224 54.78 -2 238652..240073 + 473 119385781 - Pden_3059 - amidase 225 55.56 -2 240368..240727 - 119 119385782 - Pden_3060 - hypothetical protein 226 63.91 0 240832..242865 + 677 119385783 - Pden_3061 - outer membrane autotransporter 227 57.17 -2 242895..243410 + 171 119385784 - Pden_3062 - hypothetical protein 228 55.16 -2 243469..243720 - 83 119385785 - Pden_3063 - hypothetical protein 229 54.36 -2 243789..245771 + 660 119385786 - Pden_3064 - hypothetical protein 230 62.18 -1 246211..246522 - 103 119385787 - Pden_3065 - plasmid stabilization system protein 231 65.17 0 246527..246793 - 88 119385788 - Pden_3066 - hypothetical protein 232 70.62 0 247092..247268 + 58 119385789 - Pden_3067 - hypothetical protein 233 64.44 0 247372..248271 + 299 119385790 - Pden_3068 - hypothetical protein 234 62.41 -1 248442..248864 + 140 119385791 - Pden_3069 - LysR family transcriptional regulator 235 63.30 0 248809..249432 - 207 119385792 - Pden_3070 - hypothetical protein 236 70.53 0 249529..252093 - 854 119385793 acnA Pden_3071 - aconitate hydratase 237 65.29 0 252149..253021 - 290 119385794 - Pden_3072 - GntR family transcriptional regulator 238 67.80 0 253108..254607 - 499 119385795 - Pden_3073 - hypothetical protein 239 67.52 0 254618..255088 - 156 119385796 - Pden_3074 - putative tricarboxylic transport membrane protein 240 66.98 0 255140..256111 - 323 119385797 - Pden_3075 - hypothetical protein 241 64.49 0 256282..256695 + 137 119385798 - Pden_3076 - hypothetical protein 242 70.04 0 256692..259682 + 996 119385799 - Pden_3077 - gene transfer agent (GTA) like protein 243 67.41 0 259693..260769 + 358 119385800 - Pden_3078 - hypothetical protein 244 60.43 -1 261211..261627 + 138 119385801 - Pden_3079 - transposase IS200-family protein 245 61.39 -1 261632..262105 - 157 119385802 - Pden_3080 - hypothetical protein 246 55.35 -2 262396..263058 - 220 119385803 - Pden_3081 - hypothetical protein 247 60.72 -1 263530..267024 - 1164 119385804 - Pden_3082 - outer membrane autotransporter 248 58.50 -1 267354..267965 + 203 119385805 - Pden_3083 - putative outer membrane protein 249 57.18 -2 268005..268373 + 122 119385806 - Pden_3084 - putative lipoprotein 250 57.84 -2 268564..268971 + 135 119385807 - Pden_3085 - hypothetical protein 251 54.70 -2 268991..269851 + 286 119385808 - Pden_3086 - hypothetical protein 252 56.33 -2 270066..271148 + 360 119385809 - Pden_3087 - extracellular solute-binding protein 253 46.27 -2 271163..271765 - 200 119385810 - Pden_3088 - hypothetical protein 254 49.66 -2 271811..272704 - 297 119385811 - Pden_3089 - helix-turn-helix domain-containing protein 255 62.38 -1 273007..273519 - 170 119385812 - Pden_3090 - hypothetical protein 256 68.14 0 273579..274733 - 384 119385813 - Pden_3091 - phage integrase family protein 257 65.89 0 274853..276391 + 512 119385814 - Pden_3092 - hypothetical protein 258 66.14 0 276953..278287 + 444 119385815 - Pden_3093 - PAS/PAC sensor signal transduction histidine kinase 259 66.36 0 278284..279273 + 329 119385816 - Pden_3094 - NADH ubiquinone oxidoreductase, 20 kDa subunit 260 68.13 0 279291..280724 + 477 119385817 - Pden_3095 - nickel-dependent hydrogenase, large subunit 261 68.84 0 280745..282994 + 749 119385818 - Pden_3096 - (NiFe) hydrogenase maturation protein HypF 262 61.69 -1 283197..284282 + 361 119385819 - Pden_3097 - hydrogenase (NiFe) small subunit HydA 263 60.26 -1 284286..286079 + 597 119385820 - Pden_3098 - nickel-dependent hydrogenase, large subunit 264 65.30 0 286095..286679 + 194 119385821 - Pden_3099 - HupE/UreJ protein 265 57.43 -2 286684..287430 + 248 119385822 - Pden_3100 - Ni/Fe-hydrogenase, b-type cytochrome subunit 266 66.52 0 287636..288304 + 222 119385823 - Pden_3101 - hydrogenase expression/formation protein 267 70.19 0 288304..288615 + 103 119385824 - Pden_3102 - hydrogenase expression/formation protein (HUPF/HYPC) 268 64.52 0 288619..289038 + 139 119385825 - Pden_3103 - hydrogenase-1 expression HyaE 269 68.82 0 289051..289884 + 277 119385826 - Pden_3104 - HupH hydrogenase expression protein 270 66.78 0 289881..290732 + 283 119385827 - Pden_3105 - rubredoxin-type Fe(Cys)4 protein 271 70.65 0 290729..291631 + 300 119385828 - Pden_3106 - HupK 272 63.74 0 291624..291965 + 113 119385829 - Pden_3107 - hydrogenase nickel insertion protein HypA 273 65.15 0 291965..292885 + 306 119385830 - Pden_3108 - hydrogenase accessory protein HypB 274 66.40 0 292889..294370 + 493 119385831 - Pden_3109 - two component, sigma54 specific, Fis family transcriptional regulator 275 67.37 0 294373..294657 + 94 119385832 - Pden_3110 - hydrogenase assembly chaperone hypC/hupF 276 63.68 0 294654..295790 + 378 119385833 - Pden_3111 - hydrogenase expression/formation protein HypD 277 69.13 0 295803..296858 + 351 119385834 - Pden_3112 - hydrogenase expression/formation protein HypE 278 62.02 -1 297085..297600 + 171 119385835 - Pden_3113 - hypothetical protein 279 64.74 0 297507..298544 - 345 119385836 - Pden_3114 - hypothetical protein 280 61.49 -1 298541..299911 - 456 119385837 - Pden_3115 - hypothetical protein 281 69.87 0 300689..301594 - 301 119385838 - Pden_3116 - helix-turn-helix domain-containing protein 282 66.28 0 301647..302417 + 256 119385839 - Pden_3117 - short-chain dehydrogenase/reductase SDR 283 66.53 0 302450..303199 - 249 119385840 - Pden_3118 - methionine aminopeptidase 284 66.87 0 303258..303755 + 165 119385841 - Pden_3119 - BadM/Rrf2 family transcriptional regulator 285 70.40 0 303759..304643 + 294 119385842 - Pden_3120 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 286 72.92 +1 304640..305311 + 223 119385843 - Pden_3121 - methyltransferase type 12 287 62.35 -1 305322..306503 - 393 119385844 - Pden_3122 - phage integrase family protein 288 65.16 0 306693..308351 - 552 119385845 - Pden_3123 - recombinase 289 69.30 0 308371..308598 - 75 119385846 - Pden_3124 - hypothetical protein 290 67.29 0 308737..309381 - 214 119385847 - Pden_3125 - hypothetical protein 291 53.06 -2 309663..310022 - 119 119385848 - Pden_3126 - hypothetical protein 292 51.93 -2 310237..310989 - 250 119385849 - Pden_3127 - peptidase C24 293 50.32 -2 311064..312305 - 413 119385850 - Pden_3128 - hypothetical protein 294 52.81 -2 312313..313308 - 331 119385851 - Pden_3129 - SMF family protein 295 64.86 0 313398..313784 + 128 119385852 - Pden_3130 - phage integrase 296 67.18 0 314148..315512 - 454 119385853 - Pden_3131 - chromate transporter 297 68.09 0 315509..316354 - 281 119385854 - Pden_3132 - rhodanese domain-containing protein 298 66.95 0 316569..317276 - 235 119385855 - Pden_3133 - NADPH-dependent FMN reductase 299 66.01 0 317273..318346 - 357 119385856 - Pden_3134 - arsenical-resistance protein 300 65.26 0 318359..318784 - 141 119385857 - Pden_3135 - arsenate reductase 301 68.33 0 318787..319146 - 119 119385858 - Pden_3136 - regulatory protein, ArsR 302 61.88 -1 319199..319678 - 159 119385859 - Pden_3137 - hypothetical protein 303 61.97 -1 320014..320844 - 276 119385860 - Pden_3138 - hypothetical protein 304 63.89 0 320864..321223 + 119 119385861 - Pden_3139 - hypothetical protein 305 55.56 -2 321481..321687 + 68 119385862 - Pden_3140 - cold-shock DNA-binding domain-containing protein 306 58.63 -1 321760..322095 + 111 119385863 - Pden_3141 - hypothetical protein 307 52.50 -2 322388..322627 - 79 119385864 - Pden_3142 - hypothetical protein 308 64.25 0 322642..322848 + 68 119385865 - Pden_3143 - cold-shock DNA-binding domain-containing protein 309 62.19 -1 322903..323103 + 66 119385866 - Pden_3144 - hypothetical protein 310 64.12 0 323419..323967 + 182 119385867 - Pden_3145 - heat shock protein Hsp20 311 64.48 0 324049..324552 + 167 119385868 - Pden_3146 - heat shock protein Hsp20 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0