version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1539 67.75 0 1585205..1586308 - 367 119387096 - Pden_4391 - ABC transporter related 1540 68.80 0 1586292..1587371 - 359 119387097 - Pden_4392 - ABC transporter related 1541 68.88 0 1587386..1588969 - 527 119387098 glpD Pden_4393 - glycerol-3-phosphate dehydrogenase 1542 58.88 -1 1589081..1589401 + 106 119387099 - Pden_4394 - hypothetical protein 1543 63.35 0 1589413..1590348 + 311 119387100 - Pden_4395 - sulfate adenylyltransferase subunit 2 1544 64.59 0 1590350..1592272 + 640 119387101 - Pden_4396 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1545 68.90 0 1592380..1593675 - 431 119387102 - Pden_4397 - hypothetical protein 1546 73.02 +1 1593677..1594810 - 377 119387103 - Pden_4398 - FAD linked oxidase domain-containing protein 1547 67.97 0 1594807..1596261 - 484 119387104 - Pden_4399 - FAD linked oxidase domain-containing protein 1548 70.99 +1 1596412..1597221 + 269 119387105 - Pden_4400 - GntR domain-containing protein 1549 68.74 0 1597278..1598243 - 321 119387106 - Pden_4401 - hypothetical protein 1550 66.00 0 1598266..1599774 - 502 119387107 - Pden_4402 - hypothetical protein 1551 67.10 0 1599787..1600251 - 154 119387108 - Pden_4403 - hypothetical protein 1552 67.38 0 1600310..1601284 - 324 119387109 - Pden_4404 - hypothetical protein 1553 69.64 0 1601479..1602825 - 448 119387110 - Pden_4405 - two component, sigma54 specific, Fis family transcriptional regulator 1554 71.54 +1 1602822..1604690 - 622 119387111 - Pden_4406 - histidine kinase 1555 66.82 0 1604791..1606113 - 440 119387112 - Pden_4407 - permease for cytosine/purines, uracil, thiamine, allantoin tranporter 1556 68.12 0 1606211..1608346 - 711 119387113 - Pden_4408 - 5-oxoprolinase (ATP-hydrolyzing) 1557 66.78 0 1608429..1610177 - 582 119387114 - Pden_4409 - 5-oxoprolinase (ATP-hydrolyzing) 1558 70.85 0 1610483..1611439 + 318 119387115 - Pden_4410 - helix-turn-helix domain-containing protein 1559 70.33 0 1611443..1612588 - 381 119387116 - Pden_4411 - L-carnitine dehydratase/bile acid-inducible protein F 1560 65.68 0 1612588..1613799 - 403 119387117 - Pden_4412 - acyl-CoA dehydrogenase domain-containing protein 1561 68.11 0 1613891..1614793 + 300 119387118 - Pden_4413 - LysR family transcriptional regulator 1562 69.71 0 1614817..1616097 - 426 119387119 - Pden_4414 - 4-aminobutyrate aminotransferase 1563 68.22 0 1616178..1616819 + 213 119387120 - Pden_4415 - XRE family transcriptional regulator 1564 69.53 0 1616830..1618263 - 477 119387121 - Pden_4416 - aldehyde dehydrogenase 1565 63.69 0 1618631..1620475 - 614 119387122 - Pden_4417 - GTP-binding protein LepA 1566 68.62 0 1620472..1621392 - 306 119387123 - Pden_4418 - hypothetical protein 1567 69.13 0 1621789..1622154 + 121 119387124 - Pden_4419 - hypothetical protein 1568 70.34 0 1622162..1622842 + 226 119387125 - Pden_4420 - silent information regulator protein Sir2 1569 71.13 +1 1623017..1624159 + 380 119387126 - Pden_4421 - phosphonate metabolism protein PhnM 1570 64.31 0 1624263..1624601 + 112 119387127 - Pden_4422 - alkylhydroperoxidase 1571 70.04 0 1624638..1626269 - 543 119387128 - Pden_4423 - phosphoglucomutase 1572 72.93 +1 1626280..1628115 - 611 119387129 - Pden_4424 - 4-alpha-glucanotransferase 1573 67.53 0 1628108..1630201 - 697 119387130 - Pden_4425 - glycogen debranching enzyme GlgX 1574 70.66 0 1630201..1631604 - 467 119387131 - Pden_4426 - glycogen/starch synthases, ADP-glucose type 1575 63.97 0 1631601..1632863 - 420 119387132 glgC Pden_4427 - glucose-1-phosphate adenylyltransferase 1576 65.66 0 1632907..1635102 - 731 119387133 - Pden_4428 - glycogen branching enzyme 1577 66.83 0 1635124..1637520 - 798 119387134 - Pden_4429 - glycogen/starch/alpha-glucan phosphorylases 1578 71.24 +1 1637767..1638618 - 283 119387135 - Pden_4430 - nicotinate-nucleotide pyrophosphorylase 1579 74.84 +1 1638615..1640180 - 521 119387136 - Pden_4431 - L-aspartate oxidase 1580 64.77 0 1640184..1641236 - 350 119387137 - Pden_4432 - quinolinate synthetase 1581 67.84 0 1641493..1642257 + 254 119387138 - Pden_4433 - regulatory proteins, IclR 1582 76.17 +2 1642263..1642841 - 192 119387139 - Pden_4434 - hypothetical protein 1583 70.78 0 1642850..1644016 - 388 119387140 - Pden_4435 - para-aminobenzoate synthase component I 1584 71.78 +1 1644105..1645277 - 390 119387141 - Pden_4436 - oxidoreductase domain-containing protein 1585 70.19 0 1645344..1646393 - 349 119387142 - Pden_4437 - oxidoreductase domain-containing protein 1586 66.41 0 1646393..1647178 - 261 119387143 - Pden_4438 - hypothetical protein 1587 67.17 0 1647221..1648222 - 333 119387144 - Pden_4439 - ABC transporter related 1588 62.83 0 1648226..1649059 - 277 119387145 - Pden_4440 - binding-protein-dependent transport systems inner membrane component 1589 64.59 0 1649056..1650018 - 320 119387146 - Pden_4441 - binding-protein-dependent transport systems inner membrane component 1590 66.28 0 1650089..1651366 - 425 119387147 - Pden_4442 - extracellular solute-binding protein 1591 68.40 0 1651797..1652429 - 210 119387148 - Pden_4443 - electron transport protein SCO1/SenC 1592 69.10 0 1652416..1653402 - 328 119387149 - Pden_4444 - hypothetical protein 1593 73.10 +1 1653460..1653879 - 139 119387150 - Pden_4445 - hypothetical protein 1594 71.75 +1 1653933..1655585 - 550 119387151 - Pden_4446 - binding-protein-dependent transport systems inner membrane component 1595 65.48 0 1655608..1656621 - 337 119387152 - Pden_4447 - extracellular solute-binding protein 1596 71.12 +1 1656714..1657835 + 373 119387153 - Pden_4448 - ABC transporter related 1597 72.60 +1 1657849..1660461 - 870 119387154 - Pden_4449 - molybdopterin oxidoreductase 1598 64.45 0 1660470..1661327 - 285 119387155 - Pden_4450 - formate/nitrite transporter 1599 70.24 0 1661340..1661675 - 111 119387156 - Pden_4451 - nitrite reductase (NAD(P)H), small subunit 1600 67.74 0 1661672..1664104 - 810 119387157 - Pden_4452 - nitrite reductase (NAD(P)H), large subunit 1601 68.73 0 1664120..1665328 - 402 119387158 - Pden_4453 - major facilitator transporter 1602 71.61 +1 1665613..1666785 - 390 119387159 - Pden_4454 - putative nitrate transport protein 1603 67.85 0 1666776..1667366 - 196 119387160 - Pden_4455 - response regulator receiver/ANTAR domain-containing protein 1604 69.46 0 1667596..1668348 + 250 119387161 - Pden_4456 - MOSC domain-containing protein 1605 70.73 0 1668345..1669181 + 278 119387162 - Pden_4457 - pyridoxal kinase 1606 70.38 0 1669248..1671560 - 770 119387163 - Pden_4458 - RNA-binding S1 domain-containing protein 1607 64.99 0 1671634..1672110 - 158 119387164 - Pden_4459 - hypothetical protein 1608 75.03 +1 1672770..1674299 - 509 119387165 - Pden_4460 - carbohydrate kinase, YjeF related protein 1609 62.54 -1 1674441..1674779 + 112 119387166 - Pden_4461 - nitrogen regulatory protein P-II 1610 63.18 0 1674857..1676263 + 468 119387167 - Pden_4462 - glutamine synthetase, type I 1611 65.98 0 1676470..1677786 + 438 119387168 - Pden_4463 - adenylosuccinate lyase 1612 69.70 0 1677847..1678902 + 351 119387169 - Pden_4464 - flagellar motor switch protein FliG 1613 63.97 0 1679499..1680500 + 333 119387170 - Pden_4465 - glyceraldehyde-3-phosphate dehydrogenase, type I 1614 68.89 0 1680590..1680904 - 104 119387171 - Pden_4466 - antifreeze protein, type I 1615 67.91 0 1681035..1682078 + 347 119387172 - Pden_4467 - dihydroorotase 1616 65.92 0 1682075..1682746 + 223 119387173 pyrE Pden_4468 - orotate phosphoribosyltransferase 1617 66.67 0 1682979..1684478 + 499 119387174 - Pden_4469 - replicative DNA helicase 1618 61.43 -1 1684475..1684837 + 120 119387175 - Pden_4470 - hypothetical protein 1619 69.56 0 1684901..1686109 + 402 119387176 - Pden_4471 - Bcr/CflA subfamily drug resistance transporter 1620 70.04 0 1686171..1687565 + 464 119387177 - Pden_4472 - hypothetical protein 1621 66.26 0 1687807..1689282 + 491 119387178 - Pden_4473 - peptidase M23B 1622 68.67 0 1689272..1689769 + 165 119387179 - Pden_4474 - hypothetical protein 1623 66.55 0 1689816..1690679 - 287 119387180 - Pden_4475 - hypothetical protein 1624 65.45 0 1690734..1691228 - 164 119387181 - Pden_4476 - pantetheine-phosphate adenylyltransferase 1625 65.30 0 1691338..1691775 - 145 119387182 - Pden_4477 - signal-transduction protein 1626 70.13 0 1691868..1692761 - 297 119387183 - Pden_4478 - LysR family transcriptional regulator 1627 66.00 0 1692871..1694370 + 499 119387184 - Pden_4479 - methylmalonate-semialdehyde dehydrogenase 1628 67.28 0 1694494..1695639 + 381 119387185 - Pden_4480 - acyl-CoA dehydrogenase domain-containing protein 1629 71.33 +1 1695640..1696647 + 335 119387186 - Pden_4481 - enoyl-CoA hydratase/isomerase 1630 70.43 0 1696644..1697519 + 291 119387187 - Pden_4482 - 3-hydroxyisobutyrate dehydrogenase 1631 68.61 0 1697600..1697908 + 102 119387188 - Pden_4483 - hypothetical protein 1632 72.69 +1 1697905..1699548 - 547 119387189 - Pden_4484 - DNA repair protein RecN 1633 63.11 0 1699556..1700398 - 280 119387190 - Pden_4485 - putative ComL lipoprotein 1634 69.86 0 1700528..1701466 - 312 119387191 lpxC Pden_4486 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1635 68.44 0 1701702..1703336 - 544 119387192 - Pden_4487 - cell division protein FtsZ 1636 69.14 0 1703557..1704891 - 444 119387193 - Pden_4488 - cell division protein FtsA 1637 71.95 +1 1704913..1705935 - 340 119387194 - Pden_4489 - cell division protein FtsQ 1638 69.12 0 1705923..1706858 - 311 119387195 - Pden_4490 - D-alanine--D-alanine ligase 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0