version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 103 66.56 0 98399..99337 - 312 119385660 - Pden_2935 - phosphatidate cytidylyltransferase 104 70.93 +1 99341..99973 - 210 119385661 - Pden_2936 - phospholipid/glycerol acyltransferase 105 72.50 +1 100393..102399 - 668 119385662 - Pden_2937 - ABC transporter related 106 71.31 +1 102392..103726 - 444 119385663 - Pden_2938 - RND family efflux transporter MFP subunit 107 70.48 0 104045..104569 + 174 119385664 - Pden_2939 - hypothetical protein 108 67.72 0 104685..105251 + 188 119385665 - Pden_2940 - TetR family transcriptional regulator 109 72.45 +1 105290..106483 + 397 119385666 - Pden_2941 - RND family efflux transporter MFP subunit 110 67.11 0 106488..109613 + 1041 119385667 - Pden_2942 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 111 73.84 +1 109715..111163 + 482 119385668 - Pden_2943 - RND efflux system outer membrane lipoprotein 112 68.22 0 111383..113182 + 599 119385669 - Pden_2944 - thiamine biosynthesis protein ThiC 113 69.84 0 113238..113993 - 251 119385670 - Pden_2945 - exopolysaccharide synthesis, ExoD 114 72.75 +1 114101..115021 - 306 119385671 - Pden_2946 - ribokinase-like domain-containing protein 115 68.65 0 115042..116349 - 435 119385672 - Pden_2947 - hypothetical protein 116 66.93 0 116359..117489 - 376 119385673 - Pden_2948 - antifreeze protein, type I 117 68.62 0 117505..118170 - 221 119385674 - Pden_2949 - hypothetical protein 118 73.16 +1 118177..119208 - 343 119385675 - Pden_2950 - hypothetical protein 119 67.25 0 119205..120398 - 397 119385676 - Pden_2951 - toxic anion resistance family protein 120 69.54 0 120579..121031 - 150 119385677 - Pden_2952 - hypothetical protein 121 70.67 0 121116..122165 - 349 119385678 - Pden_2953 - helix-turn-helix domain-containing protein 122 66.59 0 122201..123535 - 444 119385679 - Pden_2954 - hypothetical protein 123 65.44 0 123627..124850 - 407 119385680 - Pden_2955 - saccharopine dehydrogenase 124 64.86 0 124897..126003 - 368 119385681 - Pden_2956 - carboxynorspermidine decarboxylase 125 68.32 0 126127..127152 - 341 119385682 - Pden_2957 - oxidoreductase domain-containing protein 126 66.67 0 127156..127614 - 152 119385683 - Pden_2958 - BadM/Rrf2 family transcriptional regulator 127 64.09 0 127780..128439 + 219 119385684 - Pden_2959 - hypothetical protein 128 70.40 0 128477..129601 + 374 119385685 - Pden_2960 - metal dependent phosphohydrolase 129 61.89 -1 129721..130935 + 404 119385686 - Pden_2961 - isocitrate dehydrogenase 130 69.66 0 131180..131848 + 222 119385687 - Pden_2962 - phosphoribosylformylglycinamidine synthase I 131 67.73 0 131915..133708 + 597 119385688 - Pden_2963 - integral membrane sensor signal transduction histidine kinase 132 66.37 0 133728..135053 + 441 119385689 - Pden_2964 - two component, sigma54 specific, Fis family transcriptional regulator 133 68.31 0 135504..138113 + 869 119385690 - Pden_2965 - ribonuclease 134 68.41 0 138190..138933 + 247 119385691 - Pden_2966 - cytochrome c biogenesis protein, transmembrane region 135 69.91 0 138930..139730 - 266 119385692 - Pden_2967 - enoyl-CoA hydratase/isomerase 136 67.85 0 139815..140237 + 140 119385693 - Pden_2968 - hypothetical protein 137 62.15 -1 140388..140852 + 154 119385694 rplM Pden_2969 - 50S ribosomal protein L13 138 67.50 0 140856..141335 + 159 119385695 rpsI Pden_2970 - 30S ribosomal protein S9 139 59.30 -1 141439..141723 + 94 119385696 - Pden_2971 - hypothetical protein 140 61.97 -1 147370..148221 - 283 119385697 - Pden_2972 - hypothetical protein 141 59.84 -1 148499..150403 - 634 119385698 - Pden_2974 - helicase domain-containing protein 142 63.49 0 150397..150711 - 104 119385699 - Pden_2975 - hypothetical protein 143 62.57 -1 150708..151268 - 186 119385700 - Pden_2976 - transposase, IS4 family protein 144 68.34 0 151529..153085 - 518 119385701 - Pden_2977 - TonB-dependent receptor, plug 145 71.53 +1 153212..154198 - 328 119385702 - Pden_2978 - putative FecR 146 67.45 0 154267..154779 - 170 119385703 - Pden_2979 - ECF subfamily RNA polymerase sigma-24 factor 147 66.07 0 155557..156567 + 336 119385704 - Pden_2980 - periplasmic binding protein 148 69.11 0 156564..157625 + 353 119385705 - Pden_2981 - transport system permease protein 149 70.33 0 157622..158386 + 254 119385706 - Pden_2982 - ABC transporter related 150 64.35 0 158387..158818 + 143 119385707 - Pden_2983 - pseudoazurin 151 69.01 0 158815..159498 + 227 119385708 - Pden_2984 - methyltransferase type 11 152 69.33 0 159505..159954 - 149 119385709 - Pden_2985 - DNA-binding protein 153 65.45 0 159971..160462 + 163 119385710 - Pden_2986 - PEP phosphonomutase and related enzymes-like 154 71.93 +1 160576..161202 - 208 119385711 - Pden_2987 - anaerobic ribonucleoside-triphosphate reductase activating protein 155 62.30 -1 161195..161377 - 60 119385712 - Pden_2988 - hypothetical protein 156 64.20 0 161392..163137 - 581 119385713 - Pden_2989 - anaerobic ribonucleoside triphosphate reductase 157 63.99 0 163940..164611 - 223 119385714 - Pden_2990 - two component LuxR family transcriptional regulator 158 69.96 0 164596..166023 - 475 119385715 - Pden_2991 - integral membrane sensor signal transduction histidine kinase 159 68.39 0 166020..166484 - 154 119385716 - Pden_2992 - hypothetical protein 160 64.98 0 166833..168731 + 632 119385717 - Pden_2993 - Pyrrolo-quinoline quinone 161 63.18 0 168805..169635 + 276 119385718 - Pden_2994 - extracellular solute-binding protein 162 63.11 0 169646..170179 + 177 119385719 - Pden_2995 - cytochrome c, class I 163 62.18 -1 170234..170545 + 103 119385720 - Pden_2996 - methanol dehydrogenase, beta subunit 164 70.78 0 170607..171626 + 339 119385721 - Pden_2997 - ATPase 165 73.80 +1 171623..172477 + 284 119385722 - Pden_2998 - hypothetical protein 166 71.77 +1 172474..173277 + 267 119385723 - Pden_2999 - MxaA protein, putative 167 73.41 +1 173274..174281 + 335 119385724 - Pden_3000 - von Willebrand factor, type A 168 74.09 +1 174278..174829 + 183 119385725 - Pden_3001 - hypothetical protein 169 70.90 0 174955..175758 + 267 119385726 - Pden_3002 - von Willebrand factor, type A 170 68.16 0 175755..176288 + 177 119385727 - Pden_3003 - MxaD protein, putative 171 61.48 -1 176306..177154 - 282 119385728 - Pden_3004 - peptidase S15 172 47.72 -2 177218..177655 - 145 119385729 - Pden_3005 - hypothetical protein 173 48.73 -2 177706..178218 - 170 119385730 - Pden_3006 - hypothetical protein 174 64.84 0 178458..180536 - 692 119385731 - Pden_3007 - TonB-dependent siderophore receptor 175 69.48 0 180896..182563 + 555 119385732 - Pden_3008 - AMP-dependent synthetase and ligase 176 74.78 +1 182560..183015 + 151 119385733 - Pden_3009 - chorismate mutase related enzymes 177 70.96 +1 182950..183927 - 325 119385734 - Pden_3010 - periplasmic binding protein 178 73.53 +1 183941..184975 - 344 119385735 - Pden_3011 - transport system permease protein 179 72.97 +1 184972..185970 - 332 119385736 - Pden_3012 - transport system permease protein 180 70.64 0 185967..186746 - 259 119385737 - Pden_3013 - ABC transporter related 181 74.94 +1 186830..188014 + 394 119385738 - Pden_3014 - NtaA/SnaA/SoxA family monooxygenase 182 73.16 +1 187954..193665 - 1903 119385739 - Pden_3015 - amino acid adenylation domain-containing protein 183 62.65 0 193771..194019 + 82 119385740 - Pden_3016 - phosphopantetheine-binding 184 68.05 0 194271..196073 + 600 119385741 - Pden_3017 - ABC transporter related 185 67.67 0 196070..197857 + 595 119385742 - Pden_3018 - ABC transporter related 186 62.59 -1 198236..198676 - 146 119385743 - Pden_3019 - signal-transduction protein 187 68.23 0 198689..199072 - 127 119385744 - Pden_3020 - succinate dehydrogenase, cytochrome b subunit 188 65.08 0 199069..199446 - 125 119385745 - Pden_3021 - succinate dehydrogenase, cytochrome b subunit 189 61.79 -1 199462..199830 - 122 119385746 - Pden_3022 - succinate dehydrogenase (ubiquinone) 190 68.65 0 199948..200400 - 150 119385747 - Pden_3023 - hypothetical protein 191 70.09 0 200422..200859 - 145 119385748 - Pden_3024 - BadM/Rrf2 family transcriptional regulator 192 67.86 0 201003..201674 + 223 119385749 - Pden_3025 - hypothetical protein 193 69.14 0 201788..202111 + 107 119385750 - Pden_3026 - hypothetical protein 194 67.26 0 202131..202469 + 112 119385751 - Pden_3027 - alkylhydroperoxidase 195 61.04 -1 202683..204353 + 556 119385752 - Pden_3028 - cytochrome-c oxidase 196 61.29 -1 204776..206932 + 718 119385753 - Pden_3029 - TonB-dependent siderophore receptor 197 62.91 0 206944..207768 + 274 119385754 - Pden_3030 - methyltransferase type 12 198 64.30 0 207773..208786 + 337 119385755 - Pden_3031 - transport system permease protein 199 68.09 0 208783..209553 + 256 119385756 - Pden_3032 - ABC transporter related 200 62.52 -1 209564..210601 + 345 119385757 - Pden_3033 - periplasmic binding protein 201 54.23 -2 210616..210993 + 125 119385758 - Pden_3034 - hypothetical protein 202 67.31 0 211066..211221 - 51 119385759 - Pden_3035 - butyrate-acetoacetate CoA-transferase 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.