version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1308 65.18 0 1316818..1317756 + 312 119386865 - Pden_4160 - SoxH protein-like 1309 68.51 0 1317760..1318842 - 360 119386866 - Pden_4161 - protein of unknown function DUF395, YeeE/YedE 1310 57.53 -2 1319216..1320298 + 360 119386867 - Pden_4162 - hypothetical protein 1311 61.55 -1 1320373..1321368 + 331 119386868 - Pden_4163 - hypothetical protein 1312 63.69 0 1321384..1321752 - 122 119386869 - Pden_4164 - HxlR family transcriptional regulator 1313 65.94 0 1321888..1322436 + 182 119386870 - Pden_4165 - (Acyl-carrier-protein) phosphodiesterase 1314 71.71 +1 1322456..1323625 - 389 119386871 - Pden_4166 - NnrS family protein 1315 69.87 0 1323622..1324371 - 249 119386872 - Pden_4167 - ABC transporter related 1316 71.67 +1 1324368..1325186 - 272 119386873 - Pden_4168 - binding-protein-dependent transport systems inner membrane component 1317 71.99 +1 1325183..1326178 - 331 119386874 - Pden_4169 - putative sulfonate/nitrate transport system substrate-binding protein 1318 70.92 0 1326284..1326589 - 101 119386875 - Pden_4170 - hypothetical protein 1319 70.05 0 1326586..1327206 - 206 119386876 - Pden_4171 - hypothetical protein 1320 69.95 0 1327210..1327758 - 182 119386877 - Pden_4172 - BadM/Rrf2 family transcriptional regulator 1321 70.77 0 1327758..1329977 - 739 119386878 - Pden_4173 - TonB-dependent receptor 1322 70.20 0 1330301..1331233 + 310 119386879 - Pden_4174 - DeoR family transcriptional regulator 1323 73.87 +1 1331237..1332679 - 480 119386880 - Pden_4175 - carbohydrate kinase, FGGY 1324 71.39 +1 1332694..1333350 - 218 119386881 - Pden_4176 - HAD family hydrolase 1325 68.17 0 1333354..1334817 - 487 119386882 - Pden_4177 - mannitol dehydrogenase domain-containing protein 1326 67.17 0 1334887..1335885 - 332 119386883 - Pden_4178 - ABC transporter related 1327 61.37 -1 1335897..1336727 - 276 119386884 - Pden_4179 - binding-protein-dependent transport systems inner membrane component 1328 61.38 -1 1336733..1337602 - 289 119386885 - Pden_4180 - binding-protein-dependent transport systems inner membrane component 1329 65.98 0 1337701..1339008 - 435 119386886 - Pden_4181 - extracellular solute-binding protein 1330 66.02 0 1339157..1339621 - 154 119386887 - Pden_4182 - 7-cyano-7-deazaguanine reductase 1331 70.76 0 1339637..1340344 - 235 119386888 - Pden_4183 - radical SAM domain-containing protein 1332 62.71 0 1340341..1340694 - 117 119386889 - Pden_4184 - putative 6-pyruvoyl tetrahydropterin synthase 1333 69.23 0 1340694..1341395 - 233 119386890 - Pden_4185 - exsB protein 1334 71.10 +1 1341593..1342585 + 330 119386891 - Pden_4186 - hypothetical protein 1335 67.70 0 1342595..1343656 - 353 119386892 - Pden_4187 - glycerol-3-phosphate transporter ATP-binding subunit 1336 63.08 0 1343657..1344520 - 287 119386893 - Pden_4188 - binding-protein-dependent transport systems inner membrane component 1337 61.79 -1 1344513..1345394 - 293 119386894 - Pden_4189 - binding-protein-dependent transport systems inner membrane component 1338 64.74 0 1345444..1346739 - 431 119386895 - Pden_4190 - extracellular solute-binding protein 1339 72.96 +1 1346993..1348057 + 354 119386896 - Pden_4191 - hypothetical protein 1340 72.53 +1 1348066..1349481 + 471 119386897 - Pden_4192 - hypothetical protein 1341 67.76 0 1349495..1350223 + 242 119386898 - Pden_4193 - hypothetical protein 1342 69.79 0 1350220..1352109 - 629 119386899 - Pden_4194 - SARP family transcriptional regulator 1343 71.28 +1 1352237..1353016 - 259 119386900 - Pden_4195 - nitroreductase 1344 72.46 +1 1353021..1354331 - 436 119386901 - Pden_4196 - hypothetical protein 1345 72.94 +1 1354328..1355443 - 371 119386902 - Pden_4197 - UBA/THIF-type NAD/FAD binding protein 1346 66.88 0 1355415..1357277 - 620 119386903 - Pden_4198 - radical SAM domain-containing protein 1347 66.16 0 1357309..1357701 - 130 119386904 - Pden_4199 - hypothetical protein 1348 68.25 0 1358307..1360007 + 566 119386905 - Pden_4200 - ABC transporter related 1349 65.45 0 1360113..1362173 - 686 119386906 - Pden_4201 - TonB-dependent heme/hemoglobin receptor family protein 1350 70.51 0 1362333..1363373 + 346 119386907 - Pden_4202 - hemin-degrading family protein 1351 72.26 +1 1363370..1364245 + 291 119386908 - Pden_4203 - periplasmic binding protein 1352 72.52 +1 1364245..1365321 + 358 119386909 - Pden_4204 - transport system permease protein 1353 72.35 +1 1365318..1366091 + 257 119386910 - Pden_4205 - hemin importer ATP-binding subunit 1354 72.05 +1 1366192..1367175 + 327 119386911 - Pden_4206 - alcohol dehydrogenase 1355 69.38 0 1367233..1369002 + 589 119386912 - Pden_4207 - poly-beta-hydroxybutyrate polymerase domain-containing protein 1356 70.02 0 1368999..1370102 - 367 119386913 - Pden_4208 - acetate kinase 1357 70.12 0 1370099..1371025 - 308 119386914 - Pden_4209 - phosphate butyryltransferase 1358 69.89 0 1371199..1371570 - 123 119386915 - Pden_4210 - response regulator receiver protein 1359 66.32 0 1371664..1373379 - 571 119386916 actP Pden_4211 - acetate permease 1360 59.87 -1 1373376..1373684 - 102 119386917 - Pden_4212 - hypothetical protein 1361 66.72 0 1373891..1375846 - 651 119386918 - Pden_4213 - acetate--CoA ligase 1362 74.86 +1 1376134..1377048 - 304 119386919 - Pden_4214 - ApbE family lipoprotein 1363 68.23 0 1377045..1377620 - 191 119386920 - Pden_4215 - NosL family protein 1364 72.85 +1 1377617..1378441 - 274 119386921 - Pden_4216 - nitrous oxide maturation protein NosY 1365 71.56 +1 1378438..1379337 - 299 119386922 - Pden_4217 - ABC transporter related 1366 66.07 0 1379303..1380634 - 443 119386923 - Pden_4218 - periplasmic copper-binding 1367 64.42 0 1380640..1382598 - 652 119386924 - Pden_4219 - nitrous-oxide reductase 1368 66.90 0 1382616..1384796 - 726 119386925 - Pden_4220 - FMN-binding domain-containing protein 1369 73.24 +1 1384793..1385203 - 136 119386926 - Pden_4221 - hypothetical protein 1370 62.84 0 1385540..1385983 + 147 119386927 - Pden_4222 - pseudoazurin 1371 67.77 0 1386142..1386414 + 90 119386928 - Pden_4223 - hypothetical protein 1372 67.40 0 1386481..1387161 - 226 119386929 - Pden_4224 - hypothetical protein 1373 72.22 +1 1387139..1387732 - 197 119386930 - Pden_4225 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1374 71.56 +1 1387729..1389198 - 489 119386931 - Pden_4226 - UbiD family decarboxylase 1375 71.54 +1 1389319..1389852 + 177 119386932 - Pden_4227 - hypothetical protein 1376 69.08 0 1389849..1390844 + 331 119386933 - Pden_4228 - peptidase U32 1377 71.49 +1 1390847..1391737 + 296 119386934 - Pden_4229 - peptidase U32 1378 71.77 +1 1391761..1392975 + 404 119386935 - Pden_4230 - NnrS family protein 1379 72.51 +1 1393035..1393547 - 170 119386936 - Pden_4231 - hypothetical protein 1380 73.63 +1 1393547..1394350 - 267 119386937 - Pden_4232 - PpiC-type peptidyl-prolyl cis-trans isomerase 1381 63.53 0 1394356..1395057 - 233 119386938 - Pden_4233 - respiratory nitrate reductase, gamma subunit 1382 68.84 0 1395072..1395761 - 229 119386939 - Pden_4234 - nitrate reductase molybdenum cofactor assembly chaperone 1383 63.18 0 1395758..1397275 - 505 119386940 - Pden_4235 - nitrate reductase, beta subunit 1384 65.26 0 1397272..1401036 - 1254 119386941 - Pden_4236 - nitrate reductase, alpha subunit 1385 66.41 0 1401051..1403768 - 905 119386942 - Pden_4237 - nitrite transporter 1386 66.10 0 1404042..1404746 + 234 119386943 ftrB Pden_4238 - transcriptional activator FtrB 1387 73.45 +1 1404840..1405901 + 353 119386944 - Pden_4239 - methylated-DNA--protein-cysteine methyltransferase 1388 74.85 +1 1405972..1406949 + 325 119386945 - Pden_4240 - FAD-binding 9, siderophore-interacting domain-containing protein 1389 69.61 0 1406954..1408144 - 396 119386946 - Pden_4241 - Bcr/CflA subfamily drug resistance transporter 1390 61.75 -1 1408491..1408673 + 60 119386947 - Pden_4242 - hypothetical protein 1391 68.37 0 1408704..1409231 + 175 119386948 - Pden_4243 - GntR domain-containing protein 1392 72.46 +1 1409413..1410396 + 327 119386949 - Pden_4244 - asparaginase/glutaminase 1393 68.86 0 1410436..1411347 - 303 119386950 - Pden_4245 - galactose 1-dehydrogenase 1394 68.44 0 1411347..1413095 - 582 119386951 - Pden_4246 - dihydroxy-acid dehydratase 1395 71.14 +1 1413095..1414078 - 327 119386952 - Pden_4247 - hypothetical protein 1396 68.45 0 1414230..1415183 + 317 119386953 - Pden_4248 - LysR family transcriptional regulator 1397 67.75 0 1415269..1416657 - 462 119386954 - Pden_4249 - sodium:dicarboxylate symporter 1398 71.15 +1 1416909..1417622 + 237 119386955 - Pden_4250 - ankyrin 1399 69.62 0 1417634..1418107 + 157 119386956 - Pden_4251 - CMP/dCMP deaminase, zinc-binding 1400 73.81 +1 1418104..1419321 + 405 119386957 - Pden_4252 - major facilitator transporter 1401 72.54 +1 1419350..1419775 + 141 119386958 - Pden_4253 - hypothetical protein 1402 72.36 +1 1419940..1420677 + 245 119386959 - Pden_4254 - hypothetical protein 1403 71.83 +1 1420741..1421979 + 412 119386960 - Pden_4255 - molecular chaperone, DnaK 1404 68.23 0 1422043..1422939 - 298 119386961 - Pden_4256 - LysR family transcriptional regulator 1405 68.33 0 1423057..1424502 + 481 119386962 - Pden_4257 - molybdopterin dehydrogenase, FAD-binding 1406 66.32 0 1424499..1426811 + 770 119386963 - Pden_4258 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1407 70.70 0 1426808..1427551 + 247 119386964 - Pden_4259 - hypothetical protein 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0