version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1157 67.58 0 1148956..1150926 - 656 119386714 - Pden_4007 - integral membrane sensor signal transduction histidine kinase 1158 66.96 0 1150919..1152289 - 456 119386715 - Pden_4008 - two component, sigma54 specific, Fis family transcriptional regulator 1159 65.12 0 1152491..1154755 + 754 119386716 - Pden_4009 - oxidoreductase alpha (molybdopterin) subunit 1160 66.31 0 1154774..1156177 + 467 119386717 - Pden_4010 - cytochrome bd ubiquinol oxidase, subunit I 1161 65.47 0 1156179..1157183 + 334 119386718 - Pden_4011 - cytochrome d ubiquinol oxidase, subunit II 1162 66.42 0 1157362..1160223 + 953 119386719 - Pden_4012 - ATPase 1163 67.30 0 1160292..1160924 + 210 119386720 - Pden_4013 - multiple antibiotic resistance (MarC)-related proteins 1164 67.25 0 1160987..1162009 + 340 119386721 - Pden_4014 - Dyp-type peroxidase family protein 1165 68.30 0 1162011..1162808 + 265 119386722 - Pden_4015 - Linocin_M18 bacteriocin protein 1166 65.99 0 1162815..1163705 + 296 119386723 - Pden_4016 - hypothetical protein 1167 64.18 0 1164011..1165297 + 428 119386724 - Pden_4017 - ABC branched chain amino acid transporter, substrate binding protein 1168 70.00 0 1165346..1167265 + 639 119386725 - Pden_4018 - inner-membrane translocator 1169 68.45 0 1167267..1168502 + 411 119386726 - Pden_4019 - inner-membrane translocator 1170 66.94 0 1168499..1169239 + 246 119386727 - Pden_4020 - ABC transporter related 1171 68.22 0 1169243..1169950 + 235 119386728 - Pden_4021 - ABC transporter related 1172 65.94 0 1170462..1171013 + 183 119386729 - Pden_4022 - redoxin domain-containing protein 1173 67.69 0 1171014..1171697 + 227 119386730 - Pden_4023 - phosphoglycolate phosphatase 1174 70.70 0 1171756..1172226 + 156 119386731 - Pden_4024 - hypothetical protein 1175 66.39 0 1172479..1174299 + 606 119386732 - Pden_4025 - GTP-binding protein TypA 1176 61.16 -1 1174385..1175020 + 211 119386733 - Pden_4026 - hypothetical protein 1177 64.81 0 1175033..1175356 - 107 119386734 - Pden_4027 - ferredoxin 1178 72.31 +1 1175481..1177040 - 519 119386735 - Pden_4028 - exodeoxyribonuclease VII, large subunit 1179 70.94 +1 1177155..1178417 + 420 119386736 - Pden_4029 - phosphoribosylamine--glycine ligase 1180 64.88 0 1178755..1180317 + 520 119386737 - Pden_4030 - 2-isopropylmalate synthase 1181 67.98 0 1180350..1181189 - 279 119386738 - Pden_4031 - hypothetical protein 1182 67.30 0 1181383..1182483 + 366 119386739 - Pden_4032 - cell shape determining protein MreB 1183 69.24 0 1182497..1183429 + 310 119386740 - Pden_4033 - rod shape-determining protein MreC 1184 68.17 0 1183422..1183952 + 176 119386741 - Pden_4034 - putative rod shape-determining protein MreD 1185 68.72 0 1183956..1185899 + 647 119386742 - Pden_4035 - peptidoglycan glycosyltransferase 1186 64.22 0 1185903..1187045 + 380 119386743 - Pden_4036 - rod shape-determining protein RodA 1187 72.42 +1 1187055..1187975 + 306 119386744 - Pden_4037 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1188 68.21 0 1188106..1189533 + 475 119386745 - Pden_4038 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1189 72.77 +1 1189606..1190637 + 343 119386746 - Pden_4039 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA 1190 65.51 0 1190693..1191298 + 201 119386747 - Pden_4040 - hypothetical protein 1191 67.89 0 1191308..1191634 - 108 119386748 - Pden_4041 - arsenate reductase and related 1192 69.17 0 1191781..1193100 - 439 119386749 - Pden_4042 - hypothetical protein 1193 66.27 0 1193259..1193768 + 169 119386750 - Pden_4043 - ErfK/YbiS/YcfS/YnhG family protein 1194 68.71 0 1193832..1195346 + 504 119386751 - Pden_4044 - NnrS family protein 1195 70.44 0 1195503..1196720 + 405 119386752 - Pden_4045 - chromate transporter 1196 63.61 0 1196881..1197174 + 97 119386753 - Pden_4046 - hypothetical protein 1197 66.53 0 1197245..1198684 - 479 119386754 - Pden_4047 - NAD(P) transhydrogenase, beta subunit 1198 67.24 0 1198698..1200272 - 524 119386755 pntA Pden_4048 - NAD(P) transhydrogenase subunit alpha 1199 67.40 0 1200368..1201048 - 226 119386756 - Pden_4049 - hypothetical protein 1200 70.83 0 1201059..1201466 - 135 119386757 - Pden_4050 - isoprenylcysteine carboxyl methyltransferase 1201 67.60 0 1201502..1203649 - 715 119386758 - Pden_4051 - malate synthase G 1202 72.20 +1 1203819..1204523 - 234 119386759 - Pden_4052 - mucin-associated surface protein 1203 68.67 0 1204691..1207234 + 847 119386760 - Pden_4053 - aminopeptidase N 1204 69.00 0 1207252..1208193 + 313 119386761 - Pden_4054 - phospholipid/glycerol acyltransferase 1205 71.88 +1 1208346..1209458 - 370 119386762 - Pden_4055 - gamma-glutamyl kinase 1206 68.90 0 1209446..1210477 - 343 119386763 obgE Pden_4056 - GTPase ObgE 1207 61.36 -1 1210622..1210960 + 112 119386764 - Pden_4057 - small multidrug resistance protein 1208 70.27 0 1211023..1212438 + 471 119386765 - Pden_4058 - hypothetical protein 1209 70.88 0 1212457..1213239 + 260 119386766 - Pden_4059 - endonuclease/exonuclease/phosphatase 1210 67.29 0 1213306..1214583 + 425 119386767 - Pden_4060 - phosphopyruvate hydratase 1211 72.79 +1 1214632..1215447 - 271 119386768 - Pden_4061 - hypothetical protein 1212 69.13 0 1215444..1217066 - 540 119386769 - Pden_4062 - alpha-isopropylmalate/homocitrate synthase family transferase 1213 67.31 0 1217099..1218487 - 462 119386770 - Pden_4063 - cysteinyl-tRNA synthetase 1214 67.25 0 1218643..1218984 + 113 119386771 - Pden_4064 - hypothetical protein 1215 69.16 0 1219068..1219508 - 146 119386772 - Pden_4065 - hypothetical protein 1216 68.33 0 1219607..1220746 - 379 119386773 - Pden_4066 - ABC transporter related 1217 61.71 -1 1220743..1221549 - 268 119386774 - Pden_4067 - binding-protein-dependent transport systems inner membrane component 1218 63.22 0 1221546..1222415 - 289 119386775 - Pden_4068 - binding-protein-dependent transport systems inner membrane component 1219 69.95 0 1222509..1222934 - 141 119386776 - Pden_4069 - hypothetical protein 1220 67.52 0 1222931..1224445 - 504 119386777 - Pden_4070 - hypothetical protein 1221 61.93 -1 1224537..1225085 + 182 119386778 - Pden_4071 - NADPH-dependent FMN reductase 1222 64.46 0 1225149..1227143 - 664 119386779 - Pden_4072 - RNA polymerase sigma factor RpoD 1223 71.72 +1 1227285..1229225 - 646 119386780 dnaG Pden_4073 - DNA primase 1224 69.91 0 1229265..1229849 - 194 119386781 - Pden_4074 - TetR family transcriptional regulator 1225 66.58 0 1230311..1231474 + 387 119386782 - Pden_4075 - L-lactate dehydrogenase (cytochrome) 1226 64.04 0 1231504..1232571 - 355 119386783 - Pden_4076 - acyltransferase family protein 1227 64.91 0 1232663..1233289 + 208 119386784 - Pden_4077 - 50S ribosomal protein L25/general stress protein Ctc 1228 67.93 0 1233405..1234745 + 446 119386785 - Pden_4078 - tRNA (uracil-5-)-methyltransferase Gid 1229 66.90 0 1234742..1235587 + 281 119386786 - Pden_4079 - glutamyl-tRNA synthetase, class Ic 1230 62.30 -1 1235569..1235934 - 121 119386787 - Pden_4080 - phosphoribosyl-AMP cyclohydrolase 1231 69.18 0 1235995..1236432 + 145 119386788 - Pden_4081 - NifU-related protein involved in Fe-S cluster formation 1232 70.82 0 1236788..1238881 - 697 119386789 - Pden_4082 - DEAD/DEAH box helicase domain-containing protein 1233 69.23 0 1238878..1241175 - 765 119386790 - Pden_4083 - DNA ligase, NAD-dependent 1234 62.07 -1 1241333..1241506 - 57 119386791 - Pden_4084 - response regulator receiver protein 1235 58.81 -1 1241524..1241892 - 122 119386792 - Pden_4085 - hypothetical protein 1236 64.41 0 1241928..1242326 + 132 119386793 - Pden_4086 - hypothetical protein 1237 64.92 0 1242832..1243461 - 209 119386794 - Pden_4087 - hypothetical protein 1238 61.85 -1 1243464..1243733 - 89 119386795 - Pden_4088 - hypothetical protein 1239 63.41 0 1243733..1245883 - 716 119386796 - Pden_4089 - metallophosphoesterase 1240 64.67 0 1245880..1246230 - 116 119386797 - Pden_4090 - hypothetical protein 1241 65.51 0 1246230..1247267 - 345 119386798 - Pden_4091 - hypothetical protein 1242 60.28 -1 1247347..1247706 + 119 119386799 - Pden_4092 - hypothetical protein 1243 64.39 0 1247883..1249376 - 497 119386800 - Pden_4093 - hypothetical protein 1244 65.40 0 1249366..1250628 - 420 119386801 - Pden_4094 - hypothetical protein 1245 62.70 0 1250937..1251944 + 335 119386802 - Pden_4095 - phage integrase family protein 1246 59.28 -1 1251970..1252524 - 184 119386803 - Pden_4096 - two component transcriptional regulator 1247 60.90 -1 1252581..1252892 - 103 119386804 - Pden_4097 - hypothetical protein 1248 68.38 0 1253056..1254225 + 389 119386805 - Pden_4098 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1249 66.42 0 1254239..1254646 - 135 119386806 - Pden_4099 - Fe-S metabolism associated SufE 1250 69.80 0 1254775..1255284 + 169 119386807 - Pden_4100 - hypothetical protein 1251 65.38 0 1255587..1256132 - 181 119386808 - Pden_4101 - GCN5-related N-acetyltransferase 1252 64.10 0 1256245..1256517 - 90 119386809 rpmA Pden_4102 - 50S ribosomal protein L27 1253 65.01 0 1256537..1256959 - 140 119386810 - Pden_4103 - ribosomal protein L21 1254 71.19 +1 1257151..1258212 - 353 119386811 - Pden_4104 - L-carnitine dehydratase/bile acid-inducible protein F 1255 57.14 -2 1258639..1258827 - 62 119386812 - Pden_4105 - hypothetical protein 1256 67.26 0 1258997..1260334 - 445 119386813 - Pden_4106 - nitrilotriacetate monooxygenase 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0