version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1084 67.22 0 1070820..1072262 + 480 119386641 - Pden_3934 - phospho-2-dehydro-3-deoxyheptonate aldolase 1085 69.57 0 1072372..1073130 - 252 119386642 - Pden_3935 - hypothetical protein 1086 68.54 0 1073313..1073951 + 212 119386643 - Pden_3936 - guanylate kinase 1087 67.42 0 1073948..1074475 + 175 119386644 - Pden_3937 - transferase hexapeptide protein 1088 70.94 +1 1074472..1075524 + 350 119386645 - Pden_3938 - PAS/PAC sensor signal transduction histidine kinase 1089 65.40 0 1075615..1077114 - 499 119386646 - Pden_3939 - amidophosphoribosyltransferase 1090 67.97 0 1077245..1077856 - 203 119386647 - Pden_3940 - colicin V production protein 1091 71.14 +1 1077900..1079264 - 454 119386648 - Pden_3941 - DNA repair protein RadA 1092 72.21 +1 1079413..1080603 - 396 119386649 - Pden_3942 - 2-octaprenyl-6-methoxyphenyl hydroxylase 1093 65.50 0 1080857..1081543 - 228 119386650 - Pden_3943 - pyrimidine 5'-nucleotidase 1094 68.71 0 1081609..1082244 + 211 119386651 - Pden_3944 - GntR family transcriptional regulator 1095 73.72 +1 1082244..1082867 + 207 119386652 - Pden_3945 - HhH-GPD family protein 1096 66.97 0 1082878..1083537 + 219 119386653 - Pden_3946 - phospholipase/carboxylesterase 1097 67.30 0 1083740..1084216 - 158 119386654 - Pden_3947 - glyoxalase/bleomycin resistance protein/dioxygenase 1098 65.73 0 1084256..1084576 + 106 119386655 - Pden_3948 - small multidrug resistance protein 1099 60.30 -1 1084712..1085308 + 198 119386656 - Pden_3949 - HNH endonuclease 1100 62.33 -1 1085439..1085807 + 122 119386657 - Pden_3950 - hypothetical protein 1101 70.27 0 1086199..1087281 + 360 119386658 - Pden_3951 - radical SAM domain-containing protein 1102 71.77 +1 1087282..1088241 - 319 119386659 - Pden_3952 - methionine synthase I 1103 65.69 0 1088330..1089349 - 339 119386660 - Pden_3953 - tryptophanyl-tRNA synthetase 1104 65.27 0 1089460..1090173 + 237 119386661 - Pden_3954 - rhomboid family protein 1105 69.19 0 1090164..1091708 - 514 119386662 - Pden_3955 - integral membrane protein MviN 1106 66.92 0 1091719..1094529 - 936 119386663 - Pden_3956 - PII uridylyl-transferase 1107 69.91 0 1094532..1095734 - 400 119386664 - Pden_3957 - hypothetical protein 1108 67.44 0 1095839..1096747 + 302 119386665 - Pden_3958 - uroporphyrin-III C/tetrapyrrole methyltransferase 1109 64.01 0 1096744..1097157 + 137 119386666 - Pden_3959 - hypothetical protein 1110 63.62 0 1097346..1098296 + 316 119386667 - Pden_3960 - glutathione synthetase 1111 72.21 +1 1098421..1099953 - 510 119386668 - Pden_3961 - Mg chelatase, subunit ChlI 1112 69.95 0 1100033..1101343 + 436 119386669 - Pden_3962 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1113 69.01 0 1101340..1102407 + 355 119386670 - Pden_3963 - cysteine desulfurase 1114 61.56 -1 1102409..1103935 + 508 119386671 - Pden_3964 - cysteine desulfurase activator complex subunit SufB 1115 63.46 0 1103932..1104243 + 103 119386672 - Pden_3965 - hypothetical protein 1116 64.02 0 1104253..1105008 + 251 119386673 - Pden_3966 - FeS assembly ATPase SufC 1117 68.00 0 1105008..1106354 + 448 119386674 - Pden_3967 - SufBD protein 1118 70.96 +1 1106351..1106839 + 162 119386675 - Pden_3968 - hypothetical protein 1119 64.29 0 1106836..1107423 + 195 119386676 - Pden_3969 - hypothetical protein 1120 66.83 0 1107420..1108631 + 403 119386677 - Pden_3970 - SufS subfamily cysteine desulfurase 1121 66.94 0 1109057..1111228 - 723 119386678 - Pden_3971 - phosphoribosylformylglycinamidine synthase II 1122 63.27 0 1111534..1112475 - 313 119386679 - Pden_3972 - LysR family transcriptional regulator 1123 67.04 0 1112959..1113771 + 270 119386680 - Pden_3973 - glutamate racemase 1124 64.41 0 1113790..1114233 + 147 119386681 - Pden_3974 - cytochrome c-type biogenesis protein CcmE 1125 68.30 0 1114309..1114920 + 203 119386682 - Pden_3975 - hypothetical protein 1126 68.93 0 1114911..1115441 + 176 119386683 - Pden_3976 - hypothetical protein 1127 67.79 0 1115530..1117491 + 653 119386684 - Pden_3977 - cytochrome c-type biogenesis protein CcmF 1128 69.09 0 1117495..1117947 + 150 119386685 - Pden_3978 - cytochrome C biogenesis protein 1129 69.52 0 1118017..1118787 + 256 119386686 - Pden_3979 - enoyl-CoA hydratase/isomerase 1130 71.94 +1 1118822..1119541 - 239 119386687 - Pden_3980 - NUDIX hydrolase 1131 68.10 0 1119544..1119963 - 139 119386688 - Pden_3981 - hypothetical protein 1132 71.68 +1 1120068..1121462 - 464 119386689 - Pden_3982 - response regulator receiver modulated diguanylate cyclase 1133 70.00 0 1121571..1121840 + 89 119386690 - Pden_3983 - hypothetical protein 1134 64.61 0 1121859..1123220 - 453 119386691 - Pden_3984 - aminotransferase class-III 1135 70.00 0 1123458..1124807 - 449 119386692 - Pden_3985 - cytochrome P450 1136 70.25 0 1124804..1126003 - 399 119386693 - Pden_3986 - hypothetical protein 1137 70.01 0 1126057..1126743 - 228 119386694 - Pden_3987 - peptidase M48, Ste24p 1138 66.92 0 1126771..1127952 - 393 119386695 - Pden_3988 - VWA containing CoxE family protein 1139 69.16 0 1128237..1129361 + 374 119386696 - Pden_3989 - Ppx/GppA phosphatase 1140 69.00 0 1129363..1130133 + 256 119386697 - Pden_3990 - ribosomal RNA methyltransferase RrmJ/FtsJ 1141 74.80 +1 1130270..1131376 - 368 119386698 - Pden_3991 - helix-turn-helix domain-containing protein 1142 71.40 +1 1131504..1132412 - 302 119386699 - Pden_3992 - tRNA delta(2)-isopentenylpyrophosphate transferase 1143 64.90 0 1132498..1133232 + 244 119386700 - Pden_3993 - uridylate kinase 1144 64.54 0 1133313..1133876 + 187 119386701 - Pden_3994 - ribosome recycling factor 1145 70.20 0 1133880..1134614 + 244 119386702 - Pden_3995 - undecaprenyl diphosphate synthase 1146 69.59 0 1134611..1135465 + 284 119386703 - Pden_3996 - phosphatidate cytidylyltransferase 1147 72.29 +1 1135470..1136642 + 390 119386704 - Pden_3997 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1148 71.12 +1 1136639..1137964 + 441 119386705 - Pden_3998 - putative membrane-associated zinc metalloprotease 1149 65.86 0 1138068..1140416 + 782 119386706 - Pden_3999 - surface antigen (D15) 1150 72.69 +1 1140416..1141195 + 259 119386707 - Pden_4000 - outer membrane chaperone Skp (OmpH) 1151 68.46 0 1141217..1142164 - 315 119386708 - Pden_4001 - purine nucleosidase 1152 72.16 +1 1142225..1144681 - 818 119386709 - Pden_4002 - penicillin amidase 1153 69.55 0 1144811..1145677 + 288 119386710 - Pden_4003 - 3-hydroxyisobutyrate dehydrogenase 1154 63.75 0 1145983..1146531 - 182 119386711 - Pden_4004 - hypothetical protein 1155 58.10 -2 1146544..1146753 - 69 119386712 - Pden_4005 - hypothetical protein 1156 65.58 0 1147245..1148897 + 550 119386713 - Pden_4006 - major facilitator transporter 1157 67.58 0 1148956..1150926 - 656 119386714 - Pden_4007 - integral membrane sensor signal transduction histidine kinase 1158 66.96 0 1150919..1152289 - 456 119386715 - Pden_4008 - two component, sigma54 specific, Fis family transcriptional regulator 1159 65.12 0 1152491..1154755 + 754 119386716 - Pden_4009 - oxidoreductase alpha (molybdopterin) subunit 1160 66.31 0 1154774..1156177 + 467 119386717 - Pden_4010 - cytochrome bd ubiquinol oxidase, subunit I 1161 65.47 0 1156179..1157183 + 334 119386718 - Pden_4011 - cytochrome d ubiquinol oxidase, subunit II 1162 66.42 0 1157362..1160223 + 953 119386719 - Pden_4012 - ATPase 1163 67.30 0 1160292..1160924 + 210 119386720 - Pden_4013 - multiple antibiotic resistance (MarC)-related proteins 1164 67.25 0 1160987..1162009 + 340 119386721 - Pden_4014 - Dyp-type peroxidase family protein 1165 68.30 0 1162011..1162808 + 265 119386722 - Pden_4015 - Linocin_M18 bacteriocin protein 1166 65.99 0 1162815..1163705 + 296 119386723 - Pden_4016 - hypothetical protein 1167 64.18 0 1164011..1165297 + 428 119386724 - Pden_4017 - ABC branched chain amino acid transporter, substrate binding protein 1168 70.00 0 1165346..1167265 + 639 119386725 - Pden_4018 - inner-membrane translocator 1169 68.45 0 1167267..1168502 + 411 119386726 - Pden_4019 - inner-membrane translocator 1170 66.94 0 1168499..1169239 + 246 119386727 - Pden_4020 - ABC transporter related 1171 68.22 0 1169243..1169950 + 235 119386728 - Pden_4021 - ABC transporter related 1172 65.94 0 1170462..1171013 + 183 119386729 - Pden_4022 - redoxin domain-containing protein 1173 67.69 0 1171014..1171697 + 227 119386730 - Pden_4023 - phosphoglycolate phosphatase 1174 70.70 0 1171756..1172226 + 156 119386731 - Pden_4024 - hypothetical protein 1175 66.39 0 1172479..1174299 + 606 119386732 - Pden_4025 - GTP-binding protein TypA 1176 61.16 -1 1174385..1175020 + 211 119386733 - Pden_4026 - hypothetical protein 1177 64.81 0 1175033..1175356 - 107 119386734 - Pden_4027 - ferredoxin 1178 72.31 +1 1175481..1177040 - 519 119386735 - Pden_4028 - exodeoxyribonuclease VII, large subunit 1179 70.94 +1 1177155..1178417 + 420 119386736 - Pden_4029 - phosphoribosylamine--glycine ligase 1180 64.88 0 1178755..1180317 + 520 119386737 - Pden_4030 - 2-isopropylmalate synthase 1181 67.98 0 1180350..1181189 - 279 119386738 - Pden_4031 - hypothetical protein 1182 67.30 0 1181383..1182483 + 366 119386739 - Pden_4032 - cell shape determining protein MreB 1183 69.24 0 1182497..1183429 + 310 119386740 - Pden_4033 - rod shape-determining protein MreC 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0