version 1.0
Paracoccus denitrificans PD1222 chromosome 2, complete sequence - 1..1730097 1662 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1047 68.78 0 1030550..1031494 + 314 119386604 - Pden_3897 - deoxyribose-phosphate aldolase 1048 69.93 0 1031497..1033827 + 776 119386605 - Pden_3898 - aldehyde dehydrogenase 1049 66.40 0 1033911..1034666 - 251 119386606 - Pden_3899 - hydroxypyruvate isomerase 1050 64.65 0 1034669..1035214 - 181 119386607 - Pden_3900 - hypothetical protein 1051 71.16 +1 1035276..1036277 + 333 119386608 - Pden_3901 - ATPase 1052 76.21 +2 1036274..1037143 + 289 119386609 - Pden_3902 - hypothetical protein 1053 74.53 +1 1037143..1039062 + 639 119386610 - Pden_3903 - hypothetical protein 1054 69.52 0 1039059..1039898 + 279 119386611 - Pden_3904 - hypothetical protein 1055 72.04 +1 1039895..1041997 + 700 119386612 - Pden_3905 - hypothetical protein 1056 63.55 0 1042009..1042554 + 181 119386613 - Pden_3906 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1057 69.47 0 1042547..1043332 + 261 119386614 - Pden_3907 - UDP-N-acetylglucosamine acyltransferase 1058 69.80 0 1043329..1044126 + 265 119386615 - Pden_3908 - hypothetical protein 1059 70.36 0 1044291..1045454 + 387 119386616 - Pden_3909 - lipid-A-disaccharide synthase 1060 68.09 0 1045429..1045779 - 116 119386617 - Pden_3910 - endoribonuclease L-PSP 1061 68.94 0 1045807..1046553 - 248 119386618 - Pden_3911 - hypothetical protein 1062 67.35 0 1046946..1047236 + 96 119386619 - Pden_3912 - hypothetical protein 1063 68.67 0 1047397..1048095 - 232 119386620 - Pden_3913 - methyltransferase type 11 1064 63.62 0 1048159..1049406 - 415 119386621 - Pden_3914 - hypothetical protein 1065 66.10 0 1049608..1049958 - 116 119386622 - Pden_3915 - transthyretin 1066 70.61 0 1049975..1051318 - 447 119386623 - Pden_3916 - hydroxydechloroatrazine ethylaminohydrolase 1067 65.79 0 1051318..1052799 - 493 119386624 - Pden_3917 - uracil-xanthine permease 1068 67.60 0 1052841..1053803 - 320 119386625 - Pden_3918 - ornithine cyclodeaminase 1069 64.95 0 1053803..1054966 - 387 119386626 - Pden_3919 - alanine racemase domain-containing protein 1070 66.46 0 1054988..1055935 - 315 119386627 - Pden_3920 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1071 68.18 0 1055950..1057140 - 396 119386628 - Pden_3921 - Serine--glyoxylate transaminase 1072 70.24 0 1057325..1058164 + 279 119386629 - Pden_3922 - regulatory proteins, IclR 1073 71.00 +1 1058292..1060046 + 584 119386630 - Pden_3923 - hypothetical protein 1074 71.83 +1 1060135..1060851 + 238 119386631 - Pden_3924 - pentapeptide repeat-containing protein 1075 72.21 +1 1060864..1062450 - 528 119386632 - Pden_3925 - SARP family transcriptional regulator 1076 70.77 0 1062638..1063684 + 348 119386633 - Pden_3926 - phosphoribosylaminoimidazole synthetase 1077 70.69 0 1063681..1064277 + 198 119386634 - Pden_3927 - phosphoribosylglycinamide formyltransferase 1078 67.56 0 1064359..1065699 - 446 119386635 - Pden_3928 - inner-membrane translocator 1079 65.87 0 1065715..1066716 - 333 119386636 - Pden_3929 - inner-membrane translocator 1080 67.23 0 1066719..1067429 - 236 119386637 - Pden_3930 - ABC transporter related 1081 63.69 0 1067429..1068334 - 301 119386638 - Pden_3931 - ABC transporter related 1082 65.65 0 1068413..1069597 - 394 119386639 - Pden_3932 - extracellular ligand-binding receptor 1083 70.91 0 1069721..1070734 - 337 119386640 - Pden_3933 - AraC family transcriptional regulator 1084 67.22 0 1070820..1072262 + 480 119386641 - Pden_3934 - phospho-2-dehydro-3-deoxyheptonate aldolase 1085 69.57 0 1072372..1073130 - 252 119386642 - Pden_3935 - hypothetical protein 1086 68.54 0 1073313..1073951 + 212 119386643 - Pden_3936 - guanylate kinase 1087 67.42 0 1073948..1074475 + 175 119386644 - Pden_3937 - transferase hexapeptide protein 1088 70.94 +1 1074472..1075524 + 350 119386645 - Pden_3938 - PAS/PAC sensor signal transduction histidine kinase 1089 65.40 0 1075615..1077114 - 499 119386646 - Pden_3939 - amidophosphoribosyltransferase 1090 67.97 0 1077245..1077856 - 203 119386647 - Pden_3940 - colicin V production protein 1091 71.14 +1 1077900..1079264 - 454 119386648 - Pden_3941 - DNA repair protein RadA 1092 72.21 +1 1079413..1080603 - 396 119386649 - Pden_3942 - 2-octaprenyl-6-methoxyphenyl hydroxylase 1093 65.50 0 1080857..1081543 - 228 119386650 - Pden_3943 - pyrimidine 5'-nucleotidase 1094 68.71 0 1081609..1082244 + 211 119386651 - Pden_3944 - GntR family transcriptional regulator 1095 73.72 +1 1082244..1082867 + 207 119386652 - Pden_3945 - HhH-GPD family protein 1096 66.97 0 1082878..1083537 + 219 119386653 - Pden_3946 - phospholipase/carboxylesterase 1097 67.30 0 1083740..1084216 - 158 119386654 - Pden_3947 - glyoxalase/bleomycin resistance protein/dioxygenase 1098 65.73 0 1084256..1084576 + 106 119386655 - Pden_3948 - small multidrug resistance protein 1099 60.30 -1 1084712..1085308 + 198 119386656 - Pden_3949 - HNH endonuclease 1100 62.33 -1 1085439..1085807 + 122 119386657 - Pden_3950 - hypothetical protein 1101 70.27 0 1086199..1087281 + 360 119386658 - Pden_3951 - radical SAM domain-containing protein 1102 71.77 +1 1087282..1088241 - 319 119386659 - Pden_3952 - methionine synthase I 1103 65.69 0 1088330..1089349 - 339 119386660 - Pden_3953 - tryptophanyl-tRNA synthetase 1104 65.27 0 1089460..1090173 + 237 119386661 - Pden_3954 - rhomboid family protein 1105 69.19 0 1090164..1091708 - 514 119386662 - Pden_3955 - integral membrane protein MviN 1106 66.92 0 1091719..1094529 - 936 119386663 - Pden_3956 - PII uridylyl-transferase 1107 69.91 0 1094532..1095734 - 400 119386664 - Pden_3957 - hypothetical protein 1108 67.44 0 1095839..1096747 + 302 119386665 - Pden_3958 - uroporphyrin-III C/tetrapyrrole methyltransferase 1109 64.01 0 1096744..1097157 + 137 119386666 - Pden_3959 - hypothetical protein 1110 63.62 0 1097346..1098296 + 316 119386667 - Pden_3960 - glutathione synthetase 1111 72.21 +1 1098421..1099953 - 510 119386668 - Pden_3961 - Mg chelatase, subunit ChlI 1112 69.95 0 1100033..1101343 + 436 119386669 - Pden_3962 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1113 69.01 0 1101340..1102407 + 355 119386670 - Pden_3963 - cysteine desulfurase 1114 61.56 -1 1102409..1103935 + 508 119386671 - Pden_3964 - cysteine desulfurase activator complex subunit SufB 1115 63.46 0 1103932..1104243 + 103 119386672 - Pden_3965 - hypothetical protein 1116 64.02 0 1104253..1105008 + 251 119386673 - Pden_3966 - FeS assembly ATPase SufC 1117 68.00 0 1105008..1106354 + 448 119386674 - Pden_3967 - SufBD protein 1118 70.96 +1 1106351..1106839 + 162 119386675 - Pden_3968 - hypothetical protein 1119 64.29 0 1106836..1107423 + 195 119386676 - Pden_3969 - hypothetical protein 1120 66.83 0 1107420..1108631 + 403 119386677 - Pden_3970 - SufS subfamily cysteine desulfurase 1121 66.94 0 1109057..1111228 - 723 119386678 - Pden_3971 - phosphoribosylformylglycinamidine synthase II 1122 63.27 0 1111534..1112475 - 313 119386679 - Pden_3972 - LysR family transcriptional regulator 1123 67.04 0 1112959..1113771 + 270 119386680 - Pden_3973 - glutamate racemase 1124 64.41 0 1113790..1114233 + 147 119386681 - Pden_3974 - cytochrome c-type biogenesis protein CcmE 1125 68.30 0 1114309..1114920 + 203 119386682 - Pden_3975 - hypothetical protein 1126 68.93 0 1114911..1115441 + 176 119386683 - Pden_3976 - hypothetical protein 1127 67.79 0 1115530..1117491 + 653 119386684 - Pden_3977 - cytochrome c-type biogenesis protein CcmF 1128 69.09 0 1117495..1117947 + 150 119386685 - Pden_3978 - cytochrome C biogenesis protein 1129 69.52 0 1118017..1118787 + 256 119386686 - Pden_3979 - enoyl-CoA hydratase/isomerase 1130 71.94 +1 1118822..1119541 - 239 119386687 - Pden_3980 - NUDIX hydrolase 1131 68.10 0 1119544..1119963 - 139 119386688 - Pden_3981 - hypothetical protein 1132 71.68 +1 1120068..1121462 - 464 119386689 - Pden_3982 - response regulator receiver modulated diguanylate cyclase 1133 70.00 0 1121571..1121840 + 89 119386690 - Pden_3983 - hypothetical protein 1134 64.61 0 1121859..1123220 - 453 119386691 - Pden_3984 - aminotransferase class-III 1135 70.00 0 1123458..1124807 - 449 119386692 - Pden_3985 - cytochrome P450 1136 70.25 0 1124804..1126003 - 399 119386693 - Pden_3986 - hypothetical protein 1137 70.01 0 1126057..1126743 - 228 119386694 - Pden_3987 - peptidase M48, Ste24p 1138 66.92 0 1126771..1127952 - 393 119386695 - Pden_3988 - VWA containing CoxE family protein 1139 69.16 0 1128237..1129361 + 374 119386696 - Pden_3989 - Ppx/GppA phosphatase 1140 69.00 0 1129363..1130133 + 256 119386697 - Pden_3990 - ribosomal RNA methyltransferase RrmJ/FtsJ 1141 74.80 +1 1130270..1131376 - 368 119386698 - Pden_3991 - helix-turn-helix domain-containing protein 1142 71.40 +1 1131504..1132412 - 302 119386699 - Pden_3992 - tRNA delta(2)-isopentenylpyrophosphate transferase 1143 64.90 0 1132498..1133232 + 244 119386700 - Pden_3993 - uridylate kinase 1144 64.54 0 1133313..1133876 + 187 119386701 - Pden_3994 - ribosome recycling factor 1145 70.20 0 1133880..1134614 + 244 119386702 - Pden_3995 - undecaprenyl diphosphate synthase 1146 69.59 0 1134611..1135465 + 284 119386703 - Pden_3996 - phosphatidate cytidylyltransferase 66.77 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0