version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 885 65.66 0 874705..875100 - 131 119383642 rpsF Pden_0891 - 30S ribosomal protein S6 886 63.40 0 875389..875970 + 193 119383643 - Pden_0892 - YceI family protein 887 65.98 0 876043..877065 - 340 119383644 - Pden_0893 - cytochrome-c peroxidase 888 69.13 0 877258..878313 + 351 119383645 - Pden_0894 - peptide chain release factor 1 889 73.31 +1 878318..879145 + 275 119383646 - Pden_0895 - HemK family modification methylase 890 68.69 0 879393..880181 + 262 119383647 - Pden_0896 - hypothetical protein 891 71.02 +1 880185..881033 - 282 119383648 ksgA Pden_0897 - dimethyladenosine transferase 892 71.41 +1 881030..881998 - 322 119383649 pdxA Pden_0898 - 4-hydroxythreonine-4-phosphate dehydrogenase 893 68.95 0 882066..883337 - 423 119383650 - Pden_0899 - PpiC-type peptidyl-prolyl cis-trans isomerase 894 69.28 0 883369..885783 - 804 119383651 - Pden_0900 - organic solvent tolerance protein 895 69.61 0 885783..886904 - 373 119383652 - Pden_0901 - permease YjgP/YjgQ family protein 896 68.23 0 886901..888049 - 382 119383653 - Pden_0902 - permease YjgP/YjgQ family protein 897 72.60 +1 888179..889780 + 533 119383654 - Pden_0903 - leucyl aminopeptidase 898 73.56 +1 889780..890229 + 149 119383655 - Pden_0904 - DNA polymerase III subunit chi 899 70.49 0 890283..890858 - 191 119383656 - Pden_0905 - hypothetical protein 900 68.30 0 890858..891469 - 203 119383657 - Pden_0906 - multiple antibiotic resistance (MarC)-related proteins 901 66.67 0 891636..891914 + 92 119383658 - Pden_0907 - sec-independent translocation protein mttA/Hcf106 902 70.44 0 891933..892436 + 167 119383659 - Pden_0908 - twin-arginine translocation protein, TatB subunit 903 61.33 -1 892437..893279 + 280 119383660 - Pden_0909 - Sec-independent protein translocase, TatC subunit 904 67.50 0 893272..894114 + 280 119383661 - Pden_0910 - hypothetical protein 905 65.14 0 894663..895712 - 349 119383662 - Pden_0911 - choloylglycine hydrolase 906 61.95 -1 895740..896078 - 112 119383663 - Pden_0912 - hypothetical protein 907 66.45 0 896404..897765 - 453 119383664 - Pden_0913 - homogentisate 1,2-dioxygenase 908 71.06 +1 897908..898339 + 143 119383665 - Pden_0914 - MarR family transcriptional regulator 909 63.66 0 898445..898843 - 132 119383666 - Pden_0915 - entericidin EcnAB 910 65.42 0 898903..899223 + 106 119383667 - Pden_0916 - TraR/DksA family transcriptional regulator 911 62.67 0 899233..899382 - 49 119383668 - Pden_0917 - entericidin EcnAB 912 67.45 0 899825..900592 - 255 119383669 - Pden_0918 - alpha/beta hydrolase fold 913 70.05 0 900663..901046 + 127 119383670 - Pden_0919 - hypothetical protein 914 65.89 0 901497..902780 - 427 119383671 - Pden_0920 - serine hydroxymethyltransferase 915 68.13 0 902924..903673 + 249 119383672 ppnK Pden_0921 - inorganic polyphosphate/ATP-NAD kinase 916 63.85 0 903740..905335 + 531 119383673 - Pden_0922 - peptide chain release factor 3 917 62.08 -1 905484..905984 + 166 119383674 - Pden_0923 - hypothetical protein 918 64.30 0 906075..906497 - 140 119383675 - Pden_0924 - OsmC family protein 919 72.15 +1 906605..907498 + 297 119383676 - Pden_0925 - hypothetical protein 920 63.56 0 907568..907921 + 117 119383677 - Pden_0926 - hypothetical protein 921 67.63 0 907993..909129 - 378 119383678 - Pden_0927 - putative deoxyguanosinetriphosphate triphosphohydrolase 922 67.56 0 909205..909540 + 111 119383679 - Pden_0928 - iron-sulfur cluster assembly accessory protein 923 67.05 0 909579..910364 + 261 119383680 - Pden_0929 - exodeoxyribonuclease III Xth 924 62.43 0 910464..910817 - 117 119383681 - Pden_0930 - hypothetical protein 925 64.89 0 910948..912804 - 618 119383682 - Pden_0931 - extracellular solute-binding protein 926 65.39 0 913215..913997 + 260 119383683 - Pden_0932 - 3-hydroxybutyrate dehydrogenase 927 65.25 0 914019..915005 - 328 119383684 - Pden_0933 - basic membrane lipoprotein 928 65.38 0 915121..916053 - 310 119383685 thyX Pden_0934 - FAD-dependent thymidylate synthase 929 62.94 0 916203..916631 + 142 119383686 - Pden_0935 - glyoxalase/bleomycin resistance protein/dioxygenase 930 66.09 0 916811..917329 - 172 119383687 - Pden_0936 - MarR family transcriptional regulator 931 66.67 0 917421..917666 - 81 119383688 - Pden_0937 - hypothetical protein 932 67.08 0 917772..918974 + 400 119383689 - Pden_0938 - aminotransferase, class I and II 933 66.45 0 919032..920438 - 468 119383690 aspA Pden_0939 - aspartate ammonia-lyase 934 66.89 0 920599..921495 - 298 119383691 - Pden_0940 - LysR family transcriptional regulator 935 72.37 +1 921708..922742 + 344 119383692 - Pden_0941 - malate/L-lactate dehydrogenase 936 63.01 0 922739..923203 - 154 119383693 - Pden_0942 - AsnC family transcriptional regulator 937 69.65 0 923313..926732 + 1139 119383694 - Pden_0943 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 938 70.16 0 926862..927233 + 123 119383695 - Pden_0944 - TetR family transcriptional regulator 939 68.96 0 927765..928766 + 333 119383696 - Pden_0945 - substrate-binding region of ABC-type glycine betaine transport system 940 66.44 0 928843..929733 + 296 119383697 - Pden_0946 - binding-protein-dependent transport systems inner membrane component 941 66.76 0 929726..930772 + 348 119383698 - Pden_0947 - glycine betaine/L-proline ABC transporter, ATPase subunit 942 71.82 +1 930853..932481 + 542 119383699 - Pden_0948 - acyl-CoA dehydrogenase domain-containing protein 943 67.85 0 932488..933501 - 337 119383700 - Pden_0949 - DNA/RNA non-specific endonuclease 944 68.73 0 933691..935244 - 517 119383701 - Pden_0950 - peptidase S8 and S53, subtilisin, kexin, sedolisin 945 66.67 0 935339..937603 - 754 119383702 - Pden_0951 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 946 67.42 0 937769..938428 - 219 119383703 - Pden_0952 - DSBA oxidoreductase 947 71.99 +1 938429..939892 - 487 119383704 - Pden_0953 - AMP-dependent synthetase and ligase 948 63.29 0 940098..940304 - 68 119383705 - Pden_0954 - cold-shock DNA-binding domain-containing protein 949 66.36 0 940532..942478 - 648 119383706 - Pden_0955 - threonyl-tRNA synthetase 950 70.80 +1 942649..943398 + 249 119383707 - Pden_0956 - hypothetical protein 951 64.36 0 943441..944784 - 447 119383708 - Pden_0957 - polyhydroxyalkanoate depolymerase, intracellular 952 68.56 0 944898..947219 + 773 119383709 - Pden_0958 - poly(R)-hydroxyalkanoic acid synthase, class I 953 66.24 0 947333..947806 + 157 119383710 - Pden_0959 - hypothetical protein 954 63.95 0 947955..948542 + 195 119383711 - Pden_0960 - polyhydroxyalkonate synthesis repressor, PhaR 955 64.17 0 948709..949788 - 359 119383712 - Pden_0961 - phage integrase family protein 956 62.39 0 949785..950018 - 77 119383713 - Pden_0962 - hypothetical protein 957 69.82 0 950015..950743 - 242 119383714 - Pden_0963 - hypothetical protein 958 64.63 0 950740..951180 - 146 119383715 - Pden_0964 - hypothetical protein 959 65.93 0 951170..951442 - 90 119383716 - Pden_0965 - hypothetical protein 960 65.57 0 951442..952170 - 242 119383717 - Pden_0966 - hypothetical protein 961 66.54 0 952167..952967 - 266 119383718 - Pden_0967 - hypothetical protein 962 60.37 -1 952964..953392 - 142 119383719 - Pden_0968 - hypothetical protein 963 65.61 0 953392..956043 - 883 119383720 - Pden_0969 - DNA methylase N-4/N-6 domain-containing protein 964 65.06 0 956047..957165 - 372 119383721 - Pden_0970 - DNA polymerase III, beta subunit 965 69.95 0 957302..957514 - 70 119383722 - Pden_0971 - hypothetical protein 966 65.52 0 957514..957774 - 86 119383723 - Pden_0972 - hypothetical protein 967 60.76 -1 958079..958315 + 78 119383724 - Pden_0973 - hypothetical protein 968 62.31 -1 958305..958832 - 175 119383725 - Pden_0974 - hypothetical protein 969 58.99 -1 959004..959615 - 203 119383726 - Pden_0975 - putative phage repressor 970 56.63 -2 959622..959930 - 102 119383727 - Pden_0976 - hypothetical protein 971 66.37 0 959968..960303 + 111 119383728 - Pden_0977 - hypothetical protein 972 55.95 -2 960623..960958 - 111 119383729 - Pden_0978 - hypothetical protein 973 68.84 0 961090..961365 + 91 119383730 - Pden_0979 - hypothetical protein 974 62.56 0 961362..961556 + 64 119383731 - Pden_0980 - hypothetical protein 975 68.15 0 961553..962695 + 380 119383732 - Pden_0981 - hypothetical protein 976 60.64 -1 962688..962936 + 82 119383733 - Pden_0982 - hypothetical protein 977 65.31 0 962933..964771 + 612 119383734 - Pden_0983 - P4 family phage/plasmid primase 978 67.98 0 965147..965905 + 252 119383735 - Pden_0984 - hypothetical protein 979 64.96 0 966075..966425 + 116 119383736 - Pden_0985 - HNH endonuclease 980 61.69 -1 966475..966735 + 86 119383737 - Pden_0986 - hypothetical protein 981 63.89 0 966910..967413 + 167 119383738 - Pden_0987 - resolvase domain-containing protein 982 65.68 0 967403..969124 + 573 119383739 - Pden_0988 - phage terminase 983 67.26 0 969124..970461 + 445 119383740 - Pden_0989 - HK97 family phage portal protein 984 68.21 0 970448..971290 + 280 119383741 - Pden_0990 - peptidase S14, ClpP 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0