version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 732 67.63 0 719689..720102 + 137 119383489 - Pden_0737 - glutathione-dependent formaldehyde-activating, GFA 733 67.89 0 720338..720991 + 217 119383490 - Pden_0738 - hexapaptide repeat-containing transferase 734 66.94 0 721049..722890 + 613 119383491 - Pden_0739 - ABC transporter related 735 70.50 0 723027..723938 + 303 119383492 - Pden_0740 - hypothetical protein 736 61.38 -1 723963..724208 + 81 119383493 - Pden_0741 - preprotein translocase, SecE subunit 737 63.89 0 724404..724943 + 179 119383494 - Pden_0742 - NusG antitermination factor 738 63.58 0 725043..725495 + 150 119383495 rplK Pden_0743 - 50S ribosomal protein L11 739 65.81 0 725499..726200 + 233 119383496 rplA Pden_0744 - 50S ribosomal protein L1 740 63.95 0 726682..727197 + 171 119383497 rplJ Pden_0745 - 50S ribosomal protein L10 741 61.07 -1 727265..727639 + 124 119383498 rplL Pden_0746 - 50S ribosomal protein L7/L12 742 64.55 0 727881..732029 + 1382 119383499 rpoB Pden_0747 - DNA-directed RNA polymerase subunit beta 743 56.73 -2 732032..732343 + 103 119383500 - Pden_0748 - hypothetical protein 744 64.34 0 732340..736548 + 1402 119383501 - Pden_0749 - DNA-directed RNA polymerase subunit beta' 745 58.33 -1 736780..737055 + 91 119383502 - Pden_0750 - hypothetical protein 746 68.58 0 737215..738156 + 313 119383503 - Pden_0751 - hypothetical protein 747 68.45 0 738156..738995 + 279 119383504 - Pden_0752 - hypothetical protein 748 61.83 -1 739289..739660 + 123 119383505 rpsL Pden_0753 - 30S ribosomal protein S12 749 64.33 0 739673..740143 + 156 119383506 - Pden_0754 - 30S ribosomal protein S7 750 63.84 0 740162..742285 + 707 119383507 - Pden_0755 - elongation factor G 751 64.29 0 742372..743547 + 391 119383508 - Pden_0756 - elongation factor Tu 752 63.17 0 743731..744531 - 266 119383509 - Pden_0757 - hypothetical protein 753 60.84 -1 744795..745103 + 102 119383510 rpsJ Pden_0758 - 30S ribosomal protein S10 754 65.45 0 745114..745851 + 245 119383511 rplC Pden_0759 - 50S ribosomal protein L3 755 66.34 0 745851..746471 + 206 119383512 rplD Pden_0760 - 50S ribosomal protein L4 756 59.60 -1 746468..746764 + 98 119383513 rplW Pden_0761 - 50S ribosomal protein L23 757 64.76 0 746860..747699 + 279 119383514 rplB Pden_0762 - 50S ribosomal protein L2 758 57.35 -2 747703..747981 + 92 119383515 rpsS Pden_0763 - 30S ribosomal protein S19 759 59.84 -1 747987..748367 + 126 119383516 rplV Pden_0764 - 50S ribosomal protein L22 760 66.39 0 748367..749089 + 240 119383517 rpsC Pden_0765 - 30S ribosomal protein S3 761 65.22 0 749102..749515 + 137 119383518 rplP Pden_0766 - 50S ribosomal protein L16 762 60.22 -1 749633..749911 + 92 119383519 - Pden_0767 - ribosomal protein L29 763 57.83 -2 749924..750172 + 82 119383520 rpsQ Pden_0768 - 30S ribosomal protein S17 764 63.41 0 750236..750604 + 122 119383521 rplN Pden_0769 - 50S ribosomal protein L14 765 62.75 0 750604..750909 + 101 119383522 rplX Pden_0770 - 50S ribosomal protein L24 766 60.96 -1 750909..751469 + 186 119383523 rplE Pden_0771 - 50S ribosomal protein L5 767 59.48 -1 751488..751793 + 101 119383524 rpsN Pden_0772 - 30S ribosomal protein S14 768 62.16 -1 751803..752201 + 132 119383525 rpsH Pden_0773 - 30S ribosomal protein S8 769 63.30 0 752213..752746 + 177 119383526 rplF Pden_0774 - 50S ribosomal protein L6 770 62.78 0 752758..753117 + 119 119383527 rplR Pden_0775 - 50S ribosomal protein L18 771 68.08 0 753236..753802 + 188 119383528 rpsE Pden_0776 - 30S ribosomal protein S5 772 62.96 0 753815..754003 + 62 119383529 rpmD Pden_0777 - 50S ribosomal protein L30 773 67.08 0 754133..754855 + 240 119383530 - Pden_0778 - hypothetical protein 774 66.67 0 755010..755495 + 161 119383531 rplO Pden_0779 - 50S ribosomal protein L15 775 64.19 0 755600..756973 + 457 119383532 secY Pden_0780 - preprotein translocase subunit SecY 776 65.60 0 757011..757667 + 218 119383533 - Pden_0781 - adenylate kinase 777 64.50 0 757831..758199 + 122 162139378 rpsM Pden_0782 - 30S ribosomal protein S13 778 65.38 0 758212..758601 + 129 119383535 - Pden_0783 - 30S ribosomal protein S11 779 62.83 0 758721..759737 + 338 119383536 - Pden_0784 - DNA-directed RNA polymerase subunit alpha 780 63.83 0 759854..760276 + 140 119383537 rplQ Pden_0785 - 50S ribosomal protein L17 781 60.95 -1 760626..761237 + 203 119383538 - Pden_0786 - response regulator receiver protein 782 64.64 0 761305..761895 + 196 119383539 - Pden_0787 - N-acyl-L-homoserine lactone synthetase-like 783 67.64 0 761957..763285 + 442 119383540 - Pden_0788 - recombination factor protein RarA 784 68.53 0 763282..763656 + 124 119383541 - Pden_0789 - CrcB protein 785 69.34 0 763653..764699 + 348 119383542 - Pden_0790 - RluA family pseudouridine synthase 786 70.74 0 764696..765358 + 220 119383543 - Pden_0791 - HAD family hydrolase 787 69.20 0 765351..766061 + 236 119383544 - Pden_0792 - ATP12 ATPase 788 64.52 0 766214..767239 + 341 119383545 - Pden_0793 - cationic amino acid ABC transporter, periplasmic binding protein 789 64.27 0 767355..768608 + 417 119383546 - Pden_0794 - polar amino acid ABC transporter, inner membrane subunit 790 66.12 0 768610..770064 + 484 119383547 - Pden_0795 - polar amino acid ABC transporter, inner membrane subunit 791 61.76 -1 770075..770848 + 257 119383548 - Pden_0796 - ABC transporter related 792 66.67 0 770948..771850 + 300 119383549 - Pden_0797 - hypothetical protein 793 64.81 0 771923..772783 - 286 119383550 - Pden_0798 - aminotransferase, class IV 794 65.11 0 772881..773906 + 341 119383551 - Pden_0799 - citrate (pro-3S)-lyase 795 69.69 0 774324..775946 - 540 119383552 - Pden_0800 - ABC transporter related 796 69.37 0 775943..776755 - 270 119383553 - Pden_0801 - binding-protein-dependent transport systems inner membrane component 797 68.90 0 776752..777690 - 312 119383554 - Pden_0802 - binding-protein-dependent transport systems inner membrane component 798 68.32 0 777739..779373 - 544 119383555 - Pden_0803 - protein of unknown function DUF894, DitE 799 68.89 0 779632..780933 + 433 119383556 - Pden_0804 - D-amino acid dehydrogenase small subunit 800 66.28 0 780997..781257 - 86 119383557 - Pden_0805 - transglycosylase-associated protein 801 64.47 0 781254..781526 - 90 119383558 - Pden_0806 - hypothetical protein 802 70.01 0 781572..782318 + 248 119383559 - Pden_0807 - ErfK/YbiS/YcfS/YnhG family protein 803 72.79 +1 782443..782997 + 184 119383560 - Pden_0808 - hypothetical protein 804 68.53 0 783068..783979 + 303 119383561 - Pden_0809 - lytic transglycosylase, catalytic 805 66.46 0 784055..785524 - 489 119383562 - Pden_0810 - extracellular solute-binding protein 806 63.35 0 785581..786273 - 230 119383563 - Pden_0811 - phosphatidylcholine synthase 807 69.86 0 786368..787243 - 291 119383564 - Pden_0812 - phosphoserine phosphatase SerB 808 67.01 0 787437..788591 + 384 119383565 - Pden_0813 - phosphoserine aminotransferase 809 64.72 0 788704..790293 + 529 119383566 - Pden_0814 - D-3-phosphoglycerate dehydrogenase 810 69.96 0 790346..791074 + 242 119383567 - Pden_0815 - metallophosphoesterase 811 69.43 0 791211..792839 + 542 119383568 - Pden_0816 - sodium-dependent inorganic phosphate (Pi) transporter 812 65.15 0 793035..793496 + 153 119383569 - Pden_0817 - CreA family protein 813 59.16 -1 793728..794060 + 110 119383570 - Pden_0818 - hemimethylated DNA binding protein 814 69.71 0 794073..794630 - 185 119383571 - Pden_0819 - putative anti-sigma regulatory factor, serine/threonine protein kinase 815 67.76 0 794627..794992 - 121 119383572 - Pden_0820 - anti-sigma-factor antagonist 816 70.37 0 795231..795608 + 125 119383573 - Pden_0821 - hypothetical protein 817 66.63 0 795629..798091 + 820 119383574 - Pden_0822 - peptidase domain-containing protein 818 66.17 0 798302..799714 + 470 119383575 - Pden_0823 - hypothetical protein 819 66.67 0 799729..800688 + 319 119383576 - Pden_0824 - hypothetical protein 820 71.62 +1 800699..801505 + 268 119383577 - Pden_0825 - transglutaminase domain-containing protein 821 64.82 0 801536..802294 + 252 119383578 - Pden_0826 - 20S proteasome, A and B subunits 822 71.18 +1 802307..804943 - 878 119383579 - Pden_0827 - DNA mismatch repair protein 823 69.29 0 805100..805939 + 279 119383580 - Pden_0828 - hydratase/decarboxylase 824 65.85 0 806084..807190 + 368 119383581 - Pden_0829 - extracellular solute-binding protein 825 64.85 0 807211..808092 + 293 119383582 - Pden_0830 - binding-protein-dependent transport systems inner membrane component 826 65.90 0 808089..808871 + 260 119383583 - Pden_0831 - binding-protein-dependent transport systems inner membrane component 827 70.53 0 808868..809902 + 344 119383584 - Pden_0832 - ABC transporter related 828 68.24 0 810408..812123 + 571 119383585 - Pden_0833 - hemolysin-type calcium-binding region 829 70.54 0 812160..812933 - 257 119383586 - Pden_0834 - WecB/TagA/CpsF family glycosyl transferase 830 65.26 0 813051..814475 + 474 119383587 - Pden_0835 - hypothetical protein 831 70.52 0 814575..820856 + 2093 119383588 - Pden_0836 - beta-ketoacyl synthase 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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