version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 586 72.94 +1 564656..565627 + 323 119383343 - Pden_0591 - putative tellurite resistance protein 587 67.29 0 565697..567145 + 482 119383344 - Pden_0592 - inosine-5'-monophosphate dehydrogenase 588 68.41 0 567470..568273 + 267 119383345 - Pden_0593 - hypothetical protein 589 71.70 +1 568349..569500 + 383 119383346 - Pden_0594 - Fmu (Sun) domain-containing protein 590 66.96 0 569558..571600 + 680 119383347 - Pden_0595 - multi-sensor hybrid histidine kinase 591 62.39 0 571624..572208 - 194 119383348 - Pden_0596 - hypothetical protein 592 61.72 -1 572452..573522 + 356 119383349 recA Pden_0597 - recombinase A 593 65.84 0 573749..576406 + 885 119383350 alaS Pden_0598 - alanyl-tRNA synthetase 594 66.67 0 576403..576693 + 96 119383351 - Pden_0599 - hypothetical protein 595 66.16 0 576760..577554 + 264 119383352 - Pden_0600 - putative glutamine amidotransferase 596 60.98 -1 577694..577939 - 81 119383353 - Pden_0601 - hypothetical protein 597 65.32 0 577960..578181 - 73 119383354 - Pden_0602 - hypothetical protein 598 66.13 0 578569..579861 + 430 119383355 - Pden_0603 - adenylosuccinate synthetase 599 63.38 0 579873..580085 + 70 119383356 - Pden_0604 - hypothetical protein 600 71.23 +1 580103..580738 + 211 119383357 - Pden_0605 - thiamine pyrophosphokinase 601 69.14 0 580824..581795 - 323 119383358 - Pden_0606 - binding-protein-dependent transport systems inner membrane component 602 63.00 0 581788..582795 - 335 119383359 - Pden_0607 - binding-protein-dependent transport systems inner membrane component 603 66.31 0 582803..584503 - 566 119383360 - Pden_0608 - extracellular solute-binding protein 604 68.63 0 584724..586553 + 609 119383361 - Pden_0609 - ABC transporter related 605 66.15 0 586652..587821 + 389 119383362 - Pden_0610 - amidohydrolase 606 65.52 0 587908..589299 - 463 119383363 - Pden_0611 - dihydrolipoamide dehydrogenase 607 69.93 0 589345..589926 - 193 119383364 - Pden_0612 - hypothetical protein 608 66.11 0 589984..591234 - 416 119383365 - Pden_0613 - major facilitator transporter 609 69.35 0 591234..592313 - 359 119383366 - Pden_0614 - queuosine biosynthesis protein 610 59.45 -1 592411..592701 + 96 119383367 - Pden_0615 - putative bacterioferritin-associated ferredoxin 611 59.05 -1 592649..593134 + 161 119383368 - Pden_0616 - bacterioferritin 612 72.74 +1 593194..593868 - 224 119383369 - Pden_0617 - HAD family hydrolase 613 68.98 0 593973..595313 + 446 119383370 - Pden_0618 - nucleotidyl transferase 614 68.87 0 595315..597132 + 605 119383371 - Pden_0619 - D-fructose-6-phosphate amidotransferase 615 73.78 +1 597136..598119 - 327 119383372 - Pden_0620 - peptidase S58, DmpA 616 62.74 0 598259..598843 + 194 119383373 - Pden_0621 - peptide methionine sulfoxide reductase 617 69.31 0 598844..599713 + 289 119383374 - Pden_0622 - ribosomal L11 methyltransferase 618 63.08 0 599834..600028 - 64 119383375 - Pden_0623 - hypothetical protein 619 68.75 0 600267..600986 - 239 119383376 - Pden_0624 - hypothetical protein 620 70.99 +1 601003..601974 + 323 119383377 ubiA Pden_0625 - prenyltransferase 621 72.56 +1 602001..604307 + 768 119383378 - Pden_0626 - OmpA/MotB domain-containing protein 622 64.53 0 604338..604664 + 108 119383379 - Pden_0627 - hypothetical protein 623 64.58 0 604661..605521 - 286 119383380 - Pden_0628 - hypothetical protein 624 61.97 -1 605518..605964 - 148 119383381 - Pden_0629 - hypothetical protein 625 66.58 0 606107..607291 - 394 119383382 - Pden_0630 - aromatic amino acid aminotransferase 626 67.94 0 607291..608151 - 286 119383383 - Pden_0631 - 3-mercaptopyruvate sulfurtransferase 627 62.00 -1 608217..608687 - 156 119383384 smpB Pden_0632 - SsrA-binding protein 628 71.84 +1 608839..610500 + 553 119383385 - Pden_0633 - acetolactate synthase 2 catalytic subunit 629 72.14 +1 610511..611935 - 474 119383386 - Pden_0634 - phosphate transporter 630 70.91 +1 611932..612402 - 156 119383387 - Pden_0635 - NUDIX hydrolase 631 71.99 +1 612399..612830 - 143 119383388 - Pden_0636 - hypothetical protein 632 74.81 +1 612897..614948 - 683 119383389 - Pden_0637 - penicillin-binding protein 1C 633 72.25 +1 615033..616142 - 369 119383390 - Pden_0638 - hypothetical protein 634 71.35 +1 616152..617519 - 455 119383391 - Pden_0639 - protein of unknown function DUF463, YcjX family protein 635 73.93 +1 617618..620026 + 802 119383392 - Pden_0640 - ATP-dependent helicase HrpB 636 66.67 0 620066..620614 - 182 119383393 - Pden_0641 - hypothetical protein 637 72.82 +1 620768..621661 - 297 119383394 - Pden_0642 - methionyl-tRNA formyltransferase 638 72.58 +1 621688..622566 - 292 119383395 - Pden_0643 - dienelactone hydrolase 639 69.11 0 622551..624188 - 545 119383396 - Pden_0644 - hypothetical protein 640 68.66 0 624493..624993 - 166 119383397 - Pden_0645 - peptide deformylase 641 70.79 +1 625277..625834 - 185 119383398 - Pden_0646 - peptide deformylase 642 65.33 0 625827..626348 - 173 119383399 - Pden_0647 - peptide deformylase 643 68.95 0 626439..627623 + 394 119383400 - Pden_0648 - aminotransferase, class I and II 644 70.79 +1 627620..628249 + 209 119383401 - Pden_0649 - ErfK/YbiS/YcfS/YnhG family protein 645 69.57 0 628306..629682 + 458 119383402 - Pden_0650 - MATE efflux family protein 646 58.23 -1 629713..629949 + 78 119383403 - Pden_0651 - AsnC family transcriptional regulator 647 70.77 0 629991..631136 + 381 119383404 - Pden_0652 - histidinol-phosphate aminotransferase 648 66.05 0 631186..631668 - 160 119383405 - Pden_0653 - AsnC family transcriptional regulator 649 64.57 0 631740..632120 + 126 119383406 - Pden_0654 - hypothetical protein 650 66.73 0 632113..633768 + 551 119383407 - Pden_0655 - nitrite/sulfite reductase hemoprotein beta subunit 651 67.49 0 633761..634492 + 243 119383408 - Pden_0656 - phosphoadenosine phosphosulfate reductase 652 68.82 0 634489..634860 + 123 119383409 - Pden_0657 - hypothetical protein 653 64.28 0 634914..635750 + 278 119383410 - Pden_0658 - ferredoxin--NADP(+) reductase 654 66.51 0 635875..638430 + 851 119383411 - Pden_0659 - DNA topoisomerase I 655 67.01 0 638639..640381 + 580 119383412 - Pden_0660 - gamma-glutamyltransferase 656 67.82 0 640375..640722 - 115 119383413 - Pden_0661 - hypothetical protein 657 64.35 0 641089..642597 - 502 119383414 - Pden_0662 - amino acid carrier protein 658 66.86 0 642700..644766 - 688 119383415 - Pden_0663 - TRAP transporter, 4TM/12TM fusion protein 659 67.27 0 644849..645850 - 333 119383416 - Pden_0664 - TRAP transporter solute receptor TAXI family protein 660 67.61 0 646155..647639 + 494 119383417 - Pden_0665 - phosphate transporter 661 64.41 0 647851..649314 + 487 119383418 - Pden_0666 - amino acid carrier protein 662 70.67 0 649453..650526 - 357 119383419 - Pden_0667 - hypothetical protein 663 67.68 0 650523..651113 - 196 119383420 - Pden_0668 - TetR family transcriptional regulator 664 69.30 0 651205..652191 + 328 119383421 - Pden_0669 - 3-oxoacyl-(acyl-carrier-protein) synthase 665 72.24 +1 652191..653123 + 310 119383422 - Pden_0670 - NAD-dependent epimerase/dehydratase 666 72.03 +1 653111..653893 + 260 119383423 - Pden_0671 - beta-lactamase domain-containing protein 667 68.70 0 653890..655170 + 426 119383424 - Pden_0672 - putative adenylate-forming enzyme 668 69.30 0 655286..656311 - 341 119383425 - Pden_0673 - regulatory protein, LacI 669 65.99 0 656409..657740 + 443 119383426 - Pden_0674 - xanthine/uracil/vitamin C permease 670 70.03 0 657740..659137 + 465 119383427 - Pden_0675 - amidohydrolase 671 68.78 0 659134..659844 + 236 119383428 - Pden_0676 - hypothetical protein 672 72.05 +1 659972..660733 - 253 119383429 - Pden_0677 - putative hydantoin racemase protein 673 60.61 -1 660737..662089 - 450 119383430 - Pden_0678 - permease for cytosine/purines, uracil, thiamine, allantoin 674 68.21 0 662118..662828 - 236 119383431 - Pden_0679 - Asp/Glu racemase 675 65.64 0 662953..663633 + 226 119383432 - Pden_0680 - GntR family transcriptional regulator 676 70.77 0 663687..664271 + 194 119383433 - Pden_0681 - hypothetical protein 677 67.65 0 664351..664755 + 134 119383434 - Pden_0682 - 4-hydroxybenzoyl-CoA thioesterase 678 66.09 0 664857..665552 + 231 119383435 - Pden_0683 - MotA/TolQ/ExbB proton channel 679 69.68 0 665554..666018 + 154 119383436 - Pden_0684 - biopolymer transport protein ExbD/TolR 680 74.11 +1 666022..667566 + 514 119383437 - Pden_0685 - TolA family protein 681 66.02 0 667568..668953 + 461 119383438 tolB Pden_0686 - translocation protein TolB 682 67.05 0 668964..669485 + 173 119383439 - Pden_0687 - OmpA domain-containing protein 683 70.75 0 669482..670411 + 309 119383440 - Pden_0688 - hypothetical protein 684 73.90 +1 670401..671630 + 409 119383441 - Pden_0689 - tRNA(Ile)-lysidine synthetase 685 64.98 0 671691..673586 + 631 119383442 - Pden_0690 - ATP-dependent metalloprotease FtsH 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0