version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2700 69.55 0 2752201..2752998 + 265 119385457 - Pden_2733 - hypothetical protein 2701 67.62 0 2752985..2754142 - 385 119385458 - Pden_2734 - hypothetical protein 2702 68.92 0 2754163..2754918 - 251 119385459 - Pden_2735 - glycerophosphoryl diester phosphodiesterase 2703 69.84 0 2754918..2755358 - 146 119385460 - Pden_2736 - endoribonuclease L-PSP 2704 60.93 -1 2755368..2755820 - 150 119385461 - Pden_2737 - hypothetical protein 2705 71.95 +1 2755866..2759369 - 1167 119385462 - Pden_2738 - chromosome segregation protein SMC 2706 68.64 0 2759463..2759816 + 117 119385463 - Pden_2739 - LrgA family protein 2707 68.62 0 2759813..2760529 + 238 119385464 - Pden_2740 - LrgB family protein 2708 60.72 -1 2760542..2761012 - 156 119385465 - Pden_2741 - hypothetical protein 2709 64.22 0 2761122..2761448 - 108 119385466 - Pden_2742 - hypothetical protein 2710 61.52 -1 2761790..2762353 + 187 119385467 - Pden_2743 - elongation factor P 2711 70.99 +1 2762441..2763574 + 377 119385468 - Pden_2744 - acetyltransferase-like 2712 62.35 -1 2763832..2764896 + 354 119385469 - Pden_2745 - putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 2713 66.29 0 2764956..2766530 + 524 119385470 - Pden_2746 - ABC transporter related 2714 64.56 0 2766523..2767707 + 394 119385471 - Pden_2747 - inner-membrane translocator 2715 73.42 +1 2767704..2768606 + 300 119385472 - Pden_2748 - 2-keto-3-deoxy-galactonokinase 2716 72.31 +1 2768603..2769205 + 200 119385473 - Pden_2749 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2717 70.23 0 2769202..2770044 + 280 119385474 - Pden_2750 - SMP-30/gluconolaconase/LRE domain-containing protein 2718 68.94 0 2770041..2771051 + 336 119385475 - Pden_2751 - aldose 1-epimerase 2719 71.51 +1 2771095..2771817 + 240 119385476 - Pden_2752 - GntR family transcriptional regulator 2720 70.80 +1 2771858..2772703 - 281 119385477 - Pden_2753 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2721 69.92 0 2772733..2773470 - 245 119385478 - Pden_2754 - short-chain dehydrogenase/reductase SDR 2722 66.80 0 2773558..2775009 - 483 119385479 - Pden_2755 - aldehyde dehydrogenase 2723 63.93 0 2775171..2775827 + 218 119385480 - Pden_2756 - peroxidase 2724 64.13 0 2775867..2776655 - 262 119385481 - Pden_2757 - glycosyl transferase family protein 2725 61.19 -1 2776652..2777455 - 267 119385482 - Pden_2758 - hypothetical protein 2726 64.99 0 2777503..2779713 - 736 119385483 - Pden_2759 - polynucleotide phosphorylase/polyadenylase 2727 59.63 -1 2780143..2780412 - 89 119385484 rpsO Pden_2760 - 30S ribosomal protein S15 2728 69.03 0 2780558..2781487 - 309 119385485 - Pden_2761 - type I secretion target repeat-containing protein 2729 68.35 0 2781594..2782247 - 217 119385486 - Pden_2762 - alanine racemase domain-containing protein 2730 61.23 -1 2782317..2783438 - 373 119385487 - Pden_2763 - outer membrane porin 2731 70.39 0 2783615..2784124 + 169 119385488 - Pden_2764 - hypothetical protein 2732 67.42 0 2784200..2786734 + 844 119385489 leuS Pden_2765 - leucyl-tRNA synthetase 2733 69.75 0 2786721..2787206 + 161 119385490 - Pden_2766 - secreted periplasmic protein 2734 71.72 +1 2787203..2788231 + 342 119385491 - Pden_2767 - DNA polymerase III, delta subunit 2735 72.72 +1 2788228..2789433 + 401 119385492 - Pden_2768 - hypothetical protein 2736 65.82 0 2789409..2789996 - 195 119385493 - Pden_2769 - glutathione S-transferase domain-containing protein 2737 66.59 0 2790118..2791362 + 414 119385494 - Pden_2770 - major facilitator transporter 2738 66.54 0 2791452..2792228 + 258 119385495 - Pden_2771 - 5'-nucleotidase 2739 69.77 0 2792380..2793573 + 397 119385496 - Pden_2772 - major facilitator transporter 2740 71.92 +1 2793566..2794612 + 348 119385497 - Pden_2773 - glycosyl transferase, group 1 2741 67.48 0 2794609..2795223 + 204 119385498 - Pden_2774 - hypothetical protein 2742 62.56 0 2795325..2796347 + 340 119385499 - Pden_2775 - aspartate-semialdehyde dehydrogenase 2743 69.96 0 2796442..2798079 + 545 119385500 - Pden_2776 - hypothetical protein 2744 69.17 0 2798267..2798905 - 212 119385501 - Pden_2777 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2745 69.42 0 2799011..2800606 - 531 119385502 - Pden_2778 - putative PAS/PAC sensor protein 2746 71.49 +1 2800682..2802070 - 462 119385503 - Pden_2779 - integral membrane sensor signal transduction histidine kinase 2747 62.06 -1 2802107..2802757 + 216 119385504 - Pden_2780 - electron transport protein SCO1/SenC 2748 66.85 0 2802810..2803358 + 182 119385505 - Pden_2781 - two component Fis family transcriptional regulator 2749 62.14 -1 2803442..2803750 + 102 119385506 - Pden_2782 - histone family protein nucleoid-structuring protein H-NS 2750 66.17 0 2803796..2804404 - 202 119385507 - Pden_2783 - metal dependent phosphohydrolase 2751 65.73 0 2804552..2805085 - 177 119385508 - Pden_2784 - preprotein translocase subunit SecB 2752 69.26 0 2805135..2805713 - 192 119385509 - Pden_2785 - FxsA cytoplasmic membrane protein 2753 68.49 0 2805825..2806481 + 218 119385510 - Pden_2786 - import inner membrane translocase, subunit Tim44 2754 73.23 +1 2806485..2807093 + 202 119385511 - Pden_2787 - Smr protein/MutS2 2755 69.18 0 2807090..2808163 - 357 119385512 - Pden_2788 - protein of unknown function DUF900, hydrolase family protein 2756 54.24 -2 2808226..2808402 - 58 119385513 - Pden_2789 - hypothetical protein 2757 66.13 0 2808460..2809767 - 435 119385514 hslU Pden_2790 - ATP-dependent protease ATP-binding subunit 2758 69.55 0 2809962..2810516 - 184 119385515 - Pden_2791 - ATP-dependent protease peptidase subunit 2759 68.95 0 2810620..2811540 + 306 119385516 - Pden_2792 - hypothetical protein 2760 63.89 0 2811544..2811867 - 107 119385517 - Pden_2793 - thioredoxin 2761 70.87 +1 2811921..2815295 - 1124 119385518 - Pden_2794 - UvrD-like DNA helicase domain-containing protein 2762 71.83 +1 2815285..2818227 - 980 119385519 - Pden_2795 - putative helicase/exonuclease 2763 68.90 0 2818220..2818891 - 223 119385520 - Pden_2796 - nucleotidyl transferase 2764 70.89 +1 2818888..2820306 - 472 119385521 - Pden_2797 - hypothetical protein 2765 71.38 +1 2820352..2821158 - 268 119385522 - Pden_2798 - dihydrodipicolinate reductase 2766 67.39 0 2821228..2821644 + 138 119385523 rbfA Pden_2799 - ribosome-binding factor A 2767 67.86 0 2821634..2822389 + 251 119385524 - Pden_2800 - hypothetical protein 2768 70.12 0 2822391..2823287 + 298 119385525 truB Pden_2801 - tRNA pseudouridine synthase B 2769 69.18 0 2823284..2824120 - 278 119385526 - Pden_2802 - hypothetical protein 2770 67.20 0 2824229..2825167 - 312 119385527 - Pden_2803 - beta-lactamase domain-containing protein 2771 66.05 0 2825242..2825889 - 215 119385528 - Pden_2804 - pseudouridylate synthase 2772 67.46 0 2825886..2826512 - 208 119385529 - Pden_2805 - lysine exporter protein LysE/YggA 2773 65.91 0 2826562..2826957 - 131 119385530 - Pden_2806 - glutathione-dependent formaldehyde-activating, GFA 2774 66.89 0 2826935..2827387 - 150 119385531 - Pden_2807 - hypothetical protein 2775 65.34 0 2827435..2827812 - 125 119385532 - Pden_2808 - hypothetical protein 2776 73.60 +1 2827915..2828736 - 273 119385533 - Pden_2809 - NAD-dependent epimerase/dehydratase 2777 66.43 0 2828733..2829587 - 284 119385534 - Pden_2810 - glycosyl transferase family protein 2778 64.46 0 2829584..2830804 - 406 119385535 - Pden_2811 - NAD-dependent epimerase/dehydratase 2779 63.96 0 2830922..2831401 + 159 119385536 - Pden_2812 - BadM/Rrf2 family transcriptional regulator 2780 70.20 0 2831555..2832403 + 282 119385537 - Pden_2813 - shikimate 5-dehydrogenase 2781 69.01 0 2832400..2832996 + 198 119385538 - Pden_2814 - dephospho-CoA kinase 2782 65.97 0 2832989..2833708 + 239 119385539 - Pden_2815 - DNA polymerase III, epsilon subunit 2783 63.61 0 2833781..2834662 + 293 119385540 - Pden_2816 - putative ribonuclease BN 2784 65.14 0 2834698..2835090 + 130 119385541 - Pden_2817 - glutathione-dependent formaldehyde-activating, GFA 2785 65.72 0 2835095..2835727 - 210 119385542 - Pden_2818 - lysine exporter protein LysE/YggA 2786 67.78 0 2835831..2837624 - 597 119385543 - Pden_2819 - signal transduction histidine kinase 2787 68.35 0 2837634..2838227 - 197 119385544 - Pden_2820 - RNA polymerase sigma factor 2788 55.78 -2 2838233..2838379 - 48 119385545 - Pden_2821 - hypothetical protein 2789 66.67 0 2838473..2839276 + 267 119385546 - Pden_2822 - two-component response regulator 2790 69.14 0 2839399..2840286 - 295 119385547 - Pden_2823 - 2-nitropropane dioxygenase, NPD 2791 69.27 0 2840283..2841512 - 409 119385548 - Pden_2824 - aldo/keto reductase 2792 71.95 +1 2841629..2843560 - 643 119385549 - Pden_2825 - selenocysteine-specific translation elongation factor 2793 69.31 0 2843580..2844488 - 302 119385550 - Pden_2826 - formate dehydrogenase accessory protein FdhE 2794 65.21 0 2844513..2845199 - 228 119385551 - Pden_2827 - formate dehydrogenase, gamma subunit 2795 65.07 0 2845199..2846197 - 332 119385552 - Pden_2828 - formate dehydrogenase, beta subunit 2796 62.97 0 2846194..2848656 - 820 119385553 - Pden_2829 - formate dehydrogenase, alpha subunit 2797 66.00 0 2848678..2849277 - 199 119385554 - Pden_2830 - molybdopterin oxidoreductase Fe4S4 region 2798 66.11 0 2849430..2850506 - 358 119385555 - Pden_2831 - ferredoxin 2799 62.47 0 2850506..2851744 - 412 119385556 - Pden_2832 - Rieske (2Fe-2S) domain-containing protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0