version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2642 68.68 0 2682975..2684168 + 397 119385399 - Pden_2672 - aminotransferase, class I and II 2643 67.78 0 2684172..2686856 + 894 119385400 - Pden_2673 - cell divisionFtsK/SpoIIIE 2644 72.24 +1 2686926..2687822 - 298 119385401 - Pden_2674 - hypothetical protein 2645 69.99 0 2687928..2689010 - 360 119385402 - Pden_2675 - secretion protein HlyD family protein 2646 67.93 0 2689007..2690668 - 553 119385403 - Pden_2676 - putative transport protein transmembrane 2647 67.10 0 2690665..2691126 - 153 119385404 - Pden_2677 - MarR family transcriptional regulator 2648 69.82 0 2691217..2695722 - 1501 119385405 - Pden_2678 - hypothetical protein 2649 68.84 0 2695722..2697605 - 627 119385406 - Pden_2679 - surface antigen (D15) 2650 71.10 +1 2697697..2698620 - 307 119385407 - Pden_2680 - glucokinase 2651 70.05 0 2698786..2699229 + 147 119385408 - Pden_2681 - hypothetical protein 2652 64.08 0 2699299..2700690 + 463 119385409 - Pden_2682 - S-adenosyl-L-homocysteine hydrolase 2653 65.33 0 2700753..2701202 + 149 119385410 - Pden_2683 - histidine triad (HIT) protein 2654 60.53 -1 2701280..2701621 + 113 119385411 - Pden_2684 - hypothetical protein 2655 72.62 +1 2701707..2702327 - 206 119385412 - Pden_2685 - enoyl-CoA hydratase/isomerase 2656 64.93 0 2702411..2703961 + 516 119385413 - Pden_2686 - hypothetical protein 2657 72.28 +1 2704057..2705409 + 450 119385414 - Pden_2687 - peptidase U62, modulator of DNA gyrase 2658 73.36 +1 2705396..2706217 + 273 119385415 - Pden_2688 - inositol monophosphatase 2659 73.26 +1 2706278..2706823 + 181 119385416 - Pden_2689 - flavin reductase domain-containing protein 2660 68.76 0 2706830..2707306 - 158 119385417 - Pden_2690 - hypothetical protein 2661 72.66 +1 2707385..2708035 - 216 119385418 - Pden_2691 - hypothetical protein 2662 68.36 0 2708037..2710103 - 688 119385419 - Pden_2692 - hypothetical protein 2663 67.42 0 2710100..2710759 - 219 119385420 - Pden_2693 - paraquat-inducible protein A 2664 67.69 0 2710756..2711436 - 226 119385421 - Pden_2694 - paraquat-inducible protein A 2665 64.29 0 2711699..2712499 + 266 119385422 - Pden_2695 - putative chemotaxis MotB protein 2666 63.16 0 2712587..2713927 + 446 119385423 - Pden_2696 - hypothetical protein 2667 62.42 0 2713983..2715443 + 486 119385424 flgK Pden_2697 - flagellar hook-associated protein FlgK 2668 58.14 -2 2715440..2716459 + 339 119385425 - Pden_2698 - putative flagellar hook-associated protein 2669 61.22 -1 2716456..2717556 + 366 119385426 flgI Pden_2699 - flagellar basal body P-ring protein 2670 60.21 -1 2719808..2720194 - 128 119385427 - Pden_2703 - transposase, IS4 family protein 2671 61.52 -1 2720191..2720559 - 122 119385428 - Pden_2704 - transposase and inactivated derivative 2672 61.44 -1 2720874..2721524 - 216 119385429 - Pden_2705 - carbonate dehydratase 2673 67.95 0 2721656..2722045 + 129 119385430 - Pden_2706 - hypothetical protein 2674 71.08 +1 2722118..2723521 + 467 119385431 - Pden_2707 - leucyl aminopeptidase 2675 72.91 +1 2723518..2724366 + 282 119385432 - Pden_2708 - NLP/P60 protein 2676 69.51 0 2724389..2725444 + 351 119385433 - Pden_2709 - NAD(P) transhydrogenase subunit alpha 2677 71.48 +1 2725508..2726692 + 394 119385434 - Pden_2710 - glucose sorbosone dehydrogenase 2678 63.71 0 2726876..2727247 - 123 119385435 - Pden_2711 - hypothetical protein 2679 67.90 0 2727297..2727944 - 215 119385436 - Pden_2712 - hypothetical protein 2680 71.06 +1 2727941..2729761 - 606 119385437 mutL Pden_2713 - DNA mismatch repair protein 2681 67.88 0 2729805..2731118 - 437 119385438 - Pden_2714 - peptidase M16 domain-containing protein 2682 67.94 0 2731115..2732533 - 472 119385439 - Pden_2715 - peptidase M16 domain-containing protein 2683 70.86 +1 2732634..2733206 - 190 119385440 - Pden_2716 - hypothetical protein 2684 68.27 0 2733238..2733921 - 227 119385441 - Pden_2717 - lipoprotein signal peptidase 2685 68.81 0 2733921..2735510 - 529 119385442 purH Pden_2718 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2686 73.03 +1 2735550..2737199 - 549 119385443 - Pden_2719 - heparinase II/III family protein 2687 73.63 +1 2737230..2738837 - 535 119385444 - Pden_2720 - Fmu (Sun) domain-containing protein 2688 70.43 0 2738891..2740060 + 389 119385445 - Pden_2721 - RND family efflux transporter MFP subunit 2689 66.96 0 2740064..2743162 + 1032 119385446 - Pden_2722 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2690 70.31 0 2743159..2744202 + 347 119385447 - Pden_2723 - selenophosphate synthetase 2691 76.50 +2 2744297..2744662 + 121 119385448 - Pden_2724 - hypothetical protein 2692 67.86 0 2744730..2745149 + 139 119385449 - Pden_2725 - hypothetical protein 2693 68.04 0 2745472..2746125 + 217 119385450 - Pden_2726 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2694 67.74 0 2746148..2747542 + 464 119385451 - Pden_2727 - TolC family type I secretion outer membrane protein 2695 67.68 0 2747569..2748357 + 262 119385452 - Pden_2728 - hypothetical protein 2696 70.26 0 2748435..2749604 - 389 119385453 - Pden_2729 - peptidase M23B 2697 68.51 0 2749636..2750286 - 216 119385454 - Pden_2730 - protein-L-isoaspartate O-methyltransferase 2698 68.30 0 2750295..2751089 - 264 119385455 - Pden_2731 - stationary-phase survival protein SurE 2699 65.48 0 2751281..2752204 + 307 119385456 - Pden_2732 - hypothetical protein 2700 69.55 0 2752201..2752998 + 265 119385457 - Pden_2733 - hypothetical protein 2701 67.62 0 2752985..2754142 - 385 119385458 - Pden_2734 - hypothetical protein 2702 68.92 0 2754163..2754918 - 251 119385459 - Pden_2735 - glycerophosphoryl diester phosphodiesterase 2703 69.84 0 2754918..2755358 - 146 119385460 - Pden_2736 - endoribonuclease L-PSP 2704 60.93 -1 2755368..2755820 - 150 119385461 - Pden_2737 - hypothetical protein 2705 71.95 +1 2755866..2759369 - 1167 119385462 - Pden_2738 - chromosome segregation protein SMC 2706 68.64 0 2759463..2759816 + 117 119385463 - Pden_2739 - LrgA family protein 2707 68.62 0 2759813..2760529 + 238 119385464 - Pden_2740 - LrgB family protein 2708 60.72 -1 2760542..2761012 - 156 119385465 - Pden_2741 - hypothetical protein 2709 64.22 0 2761122..2761448 - 108 119385466 - Pden_2742 - hypothetical protein 2710 61.52 -1 2761790..2762353 + 187 119385467 - Pden_2743 - elongation factor P 2711 70.99 +1 2762441..2763574 + 377 119385468 - Pden_2744 - acetyltransferase-like 2712 62.35 -1 2763832..2764896 + 354 119385469 - Pden_2745 - putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 2713 66.29 0 2764956..2766530 + 524 119385470 - Pden_2746 - ABC transporter related 2714 64.56 0 2766523..2767707 + 394 119385471 - Pden_2747 - inner-membrane translocator 2715 73.42 +1 2767704..2768606 + 300 119385472 - Pden_2748 - 2-keto-3-deoxy-galactonokinase 2716 72.31 +1 2768603..2769205 + 200 119385473 - Pden_2749 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2717 70.23 0 2769202..2770044 + 280 119385474 - Pden_2750 - SMP-30/gluconolaconase/LRE domain-containing protein 2718 68.94 0 2770041..2771051 + 336 119385475 - Pden_2751 - aldose 1-epimerase 2719 71.51 +1 2771095..2771817 + 240 119385476 - Pden_2752 - GntR family transcriptional regulator 2720 70.80 +1 2771858..2772703 - 281 119385477 - Pden_2753 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2721 69.92 0 2772733..2773470 - 245 119385478 - Pden_2754 - short-chain dehydrogenase/reductase SDR 2722 66.80 0 2773558..2775009 - 483 119385479 - Pden_2755 - aldehyde dehydrogenase 2723 63.93 0 2775171..2775827 + 218 119385480 - Pden_2756 - peroxidase 2724 64.13 0 2775867..2776655 - 262 119385481 - Pden_2757 - glycosyl transferase family protein 2725 61.19 -1 2776652..2777455 - 267 119385482 - Pden_2758 - hypothetical protein 2726 64.99 0 2777503..2779713 - 736 119385483 - Pden_2759 - polynucleotide phosphorylase/polyadenylase 2727 59.63 -1 2780143..2780412 - 89 119385484 rpsO Pden_2760 - 30S ribosomal protein S15 2728 69.03 0 2780558..2781487 - 309 119385485 - Pden_2761 - type I secretion target repeat-containing protein 2729 68.35 0 2781594..2782247 - 217 119385486 - Pden_2762 - alanine racemase domain-containing protein 2730 61.23 -1 2782317..2783438 - 373 119385487 - Pden_2763 - outer membrane porin 2731 70.39 0 2783615..2784124 + 169 119385488 - Pden_2764 - hypothetical protein 2732 67.42 0 2784200..2786734 + 844 119385489 leuS Pden_2765 - leucyl-tRNA synthetase 2733 69.75 0 2786721..2787206 + 161 119385490 - Pden_2766 - secreted periplasmic protein 2734 71.72 +1 2787203..2788231 + 342 119385491 - Pden_2767 - DNA polymerase III, delta subunit 2735 72.72 +1 2788228..2789433 + 401 119385492 - Pden_2768 - hypothetical protein 2736 65.82 0 2789409..2789996 - 195 119385493 - Pden_2769 - glutathione S-transferase domain-containing protein 2737 66.59 0 2790118..2791362 + 414 119385494 - Pden_2770 - major facilitator transporter 2738 66.54 0 2791452..2792228 + 258 119385495 - Pden_2771 - 5'-nucleotidase 2739 69.77 0 2792380..2793573 + 397 119385496 - Pden_2772 - major facilitator transporter 2740 71.92 +1 2793566..2794612 + 348 119385497 - Pden_2773 - glycosyl transferase, group 1 2741 67.48 0 2794609..2795223 + 204 119385498 - Pden_2774 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0