version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2567 69.10 0 2607974..2609371 - 465 119385324 argJ Pden_2597 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2568 65.60 0 2609375..2610214 - 279 119385325 - Pden_2598 - PpiC-type peptidyl-prolyl cis-trans isomerase 2569 64.86 0 2610423..2613128 + 901 162139377 - Pden_2599 - preprotein translocase subunit SecA 2570 68.06 0 2613274..2613993 - 239 119385327 - Pden_2600 - two component transcriptional regulator 2571 67.63 0 2613990..2614508 - 172 119385328 - Pden_2601 - MarR family transcriptional regulator 2572 63.68 0 2614661..2615530 + 289 119385329 - Pden_2602 - branched-chain amino acid aminotransferase 2573 68.39 0 2615882..2616346 - 154 119385330 - Pden_2603 - putative PTS IIA-like nitrogen-regulatory protein PtsN 2574 61.66 -1 2616429..2617007 - 192 119385331 - Pden_2604 - sigma 54 modulation protein/ribosomal protein S30EA 2575 65.71 0 2617172..2617906 - 244 119385332 - Pden_2605 - ABC transporter related 2576 69.75 0 2617911..2618396 - 161 119385333 - Pden_2606 - OstA family protein 2577 71.31 +1 2618449..2619030 - 193 119385334 - Pden_2607 - hypothetical protein 2578 70.36 0 2619033..2619980 - 315 119385335 - Pden_2608 - KpsF/GutQ family protein 2579 65.69 0 2619991..2620605 - 204 119385336 - Pden_2609 - 3'-5' exonuclease 2580 62.01 -1 2620850..2622847 + 665 119385337 - Pden_2610 - TonB-dependent receptor 2581 70.98 +1 2622995..2623249 + 84 119385338 - Pden_2611 - XRE family transcriptional regulator 2582 69.00 0 2623316..2624983 + 555 119385339 - Pden_2612 - sulphate transporter 2583 63.84 0 2625098..2625982 - 294 119385340 purU Pden_2613 - formyltetrahydrofolate deformylase 2584 70.35 0 2626054..2626950 - 298 119385341 - Pden_2614 - methenyltetrahydrofolate cyclohydrolase 2585 69.04 0 2627184..2629964 - 926 119385342 - Pden_2615 - patatin 2586 72.22 +1 2630065..2631792 - 575 119385343 - Pden_2616 - hypothetical protein 2587 74.43 +1 2631792..2632925 - 377 119385344 - Pden_2617 - iron-containing alcohol dehydrogenase 2588 71.30 +1 2632922..2634409 - 495 119385345 - Pden_2618 - glycerol kinase 2589 68.48 0 2634599..2635369 + 256 119385346 - Pden_2619 - DeoR family transcriptional regulator 2590 69.48 0 2635379..2636623 - 414 119385347 - Pden_2620 - kynureninase 2591 67.74 0 2636641..2637669 - 342 119385348 - Pden_2621 - periplasmic binding protein/LacI transcriptional regulator 2592 68.06 0 2637985..2638272 - 95 119385349 - Pden_2622 - hypothetical protein 2593 64.63 0 2638276..2638668 - 130 119385350 - Pden_2623 - hypothetical protein 2594 61.55 -1 2638735..2639379 - 214 119385351 - Pden_2624 - TetR family transcriptional regulator 2595 57.76 -2 2639404..2639751 - 115 119385352 - Pden_2625 - hypothetical protein 2596 67.21 0 2640280..2641386 - 368 119385353 flhB Pden_2626 - flagellar biosynthesis protein FlhB 2597 65.61 0 2641383..2642141 - 252 119385354 - Pden_2627 - flagellar biosynthetic protein FliR 2598 65.76 0 2642138..2644222 - 694 119385355 flhA Pden_2628 - flagellar biosynthesis protein FlhA 2599 67.04 0 2644219..2644488 - 89 119385356 - Pden_2629 - hypothetical protein 2600 61.28 -1 2644485..2644985 - 166 119385357 - Pden_2630 - flagellar motor protein 2601 63.48 0 2645365..2645898 + 177 119385358 - Pden_2631 - hypothetical protein 2602 65.54 0 2645895..2646161 + 88 119385359 - Pden_2632 - hypothetical protein 2603 67.83 0 2646726..2648360 + 544 119385360 - Pden_2633 - phage terminase 2604 67.57 0 2648357..2648689 + 110 119385361 - Pden_2634 - HNH endonuclease 2605 67.31 0 2648698..2649933 + 411 119385362 - Pden_2635 - hypothetical protein 2606 70.29 0 2649933..2650484 + 183 119385363 - Pden_2636 - HK97 family phage prohead protease 2607 68.93 0 2650486..2651547 + 353 119385364 - Pden_2637 - hypothetical protein 2608 66.07 0 2651547..2652053 + 168 119385365 - Pden_2638 - hypothetical protein 2609 65.96 0 2652029..2652595 + 188 119385366 - Pden_2639 - hypothetical protein 2610 65.89 0 2652588..2652845 + 85 119385367 - Pden_2640 - hypothetical protein 2611 56.49 -2 2652854..2653138 + 94 119385368 - Pden_2641 - hypothetical protein 2612 53.80 -2 2653148..2653450 + 100 119385369 - Pden_2642 - hypothetical protein 2613 58.77 -1 2653740..2653967 + 75 119385370 - Pden_2643 - hypothetical protein 2614 62.60 0 2654388..2655395 + 335 119385371 - Pden_2644 - phage integrase family protein 2615 62.42 0 2655460..2655906 - 148 119385372 - Pden_2645 - chemotaxis protein MotA 2616 66.48 0 2655915..2656457 - 180 119385373 - Pden_2646 - hypothetical protein 2617 63.79 0 2656450..2656797 - 115 119385374 - Pden_2647 - hypothetical protein 2618 63.77 0 2656794..2657276 - 160 119385375 - Pden_2648 - flagellar basal body-associated protein FliL 2619 66.79 0 2657379..2658959 + 526 119385376 fliF Pden_2649 - flagellar MS-ring protein 2620 65.24 0 2658956..2659516 + 186 119385377 - Pden_2650 - hypothetical protein 2621 64.34 0 2659519..2659776 + 85 119385378 - Pden_2651 - surface presentation of antigens (SPOA) protein 2622 65.15 0 2659773..2660498 + 241 119385379 fliP Pden_2652 - flagellar biosynthesis protein FliP 2623 71.00 +1 2660610..2661785 + 391 119385380 - Pden_2653 - RND family efflux transporter MFP subunit 2624 71.21 +1 2661782..2662882 + 366 119385381 - Pden_2654 - RND family efflux transporter MFP subunit 2625 65.79 0 2662879..2665974 + 1031 119385382 - Pden_2655 - acriflavin resistance protein 2626 69.57 0 2666082..2668454 - 790 119385383 - Pden_2656 - ATP-dependent DNA helicase RecQ 2627 68.41 0 2668554..2669126 + 190 119385384 - Pden_2657 - hypothetical protein 2628 69.29 0 2669142..2670551 + 469 119385385 - Pden_2658 - major facilitator transporter 2629 70.56 0 2670548..2671420 + 290 119385386 mepA Pden_2659 - penicillin-insensitive murein endopeptidase 2630 69.45 0 2671393..2672361 + 322 119385387 - Pden_2660 - hypothetical protein 2631 72.22 +1 2672358..2673491 + 377 119385388 - Pden_2661 - beta-lactamase 2632 64.23 0 2673590..2674204 + 204 119385389 - Pden_2662 - hypothetical protein 2633 68.70 0 2674609..2675790 - 393 119385390 - Pden_2663 - beta-ketothiolase 2634 67.23 0 2675895..2676251 + 118 119385391 - Pden_2664 - ModE family transcriptional regulator 2635 66.80 0 2676318..2677058 + 246 119385392 - Pden_2665 - molybdenum ABC transporter, periplasmic molybdate-binding protein 2636 70.50 0 2677055..2677759 + 234 119385393 - Pden_2666 - molybdate ABC transporter, inner membrane subunit 2637 71.97 +1 2677759..2678814 + 351 119385394 - Pden_2667 - molybdate ABC transporter, ATPase subunit 2638 64.77 0 2678889..2679467 + 192 119385395 - Pden_2668 - hypothetical protein 2639 63.32 0 2679482..2680078 - 198 119385396 - Pden_2669 - outer membrane lipoprotein carrier protein LolA 2640 71.83 +1 2680168..2681427 - 419 119385397 - Pden_2670 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2641 72.85 +1 2681521..2682846 + 441 119385398 - Pden_2671 - amidase 2642 68.68 0 2682975..2684168 + 397 119385399 - Pden_2672 - aminotransferase, class I and II 2643 67.78 0 2684172..2686856 + 894 119385400 - Pden_2673 - cell divisionFtsK/SpoIIIE 2644 72.24 +1 2686926..2687822 - 298 119385401 - Pden_2674 - hypothetical protein 2645 69.99 0 2687928..2689010 - 360 119385402 - Pden_2675 - secretion protein HlyD family protein 2646 67.93 0 2689007..2690668 - 553 119385403 - Pden_2676 - putative transport protein transmembrane 2647 67.10 0 2690665..2691126 - 153 119385404 - Pden_2677 - MarR family transcriptional regulator 2648 69.82 0 2691217..2695722 - 1501 119385405 - Pden_2678 - hypothetical protein 2649 68.84 0 2695722..2697605 - 627 119385406 - Pden_2679 - surface antigen (D15) 2650 71.10 +1 2697697..2698620 - 307 119385407 - Pden_2680 - glucokinase 2651 70.05 0 2698786..2699229 + 147 119385408 - Pden_2681 - hypothetical protein 2652 64.08 0 2699299..2700690 + 463 119385409 - Pden_2682 - S-adenosyl-L-homocysteine hydrolase 2653 65.33 0 2700753..2701202 + 149 119385410 - Pden_2683 - histidine triad (HIT) protein 2654 60.53 -1 2701280..2701621 + 113 119385411 - Pden_2684 - hypothetical protein 2655 72.62 +1 2701707..2702327 - 206 119385412 - Pden_2685 - enoyl-CoA hydratase/isomerase 2656 64.93 0 2702411..2703961 + 516 119385413 - Pden_2686 - hypothetical protein 2657 72.28 +1 2704057..2705409 + 450 119385414 - Pden_2687 - peptidase U62, modulator of DNA gyrase 2658 73.36 +1 2705396..2706217 + 273 119385415 - Pden_2688 - inositol monophosphatase 2659 73.26 +1 2706278..2706823 + 181 119385416 - Pden_2689 - flavin reductase domain-containing protein 2660 68.76 0 2706830..2707306 - 158 119385417 - Pden_2690 - hypothetical protein 2661 72.66 +1 2707385..2708035 - 216 119385418 - Pden_2691 - hypothetical protein 2662 68.36 0 2708037..2710103 - 688 119385419 - Pden_2692 - hypothetical protein 2663 67.42 0 2710100..2710759 - 219 119385420 - Pden_2693 - paraquat-inducible protein A 2664 67.69 0 2710756..2711436 - 226 119385421 - Pden_2694 - paraquat-inducible protein A 2665 64.29 0 2711699..2712499 + 266 119385422 - Pden_2695 - putative chemotaxis MotB protein 2666 63.16 0 2712587..2713927 + 446 119385423 - Pden_2696 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0