version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2374 60.96 -1 2398139..2398366 + 75 119385131 - Pden_2403 - XRE family transcriptional regulator 2375 63.49 0 2398439..2399194 + 251 119385132 - Pden_2404 - hypothetical protein 2376 58.22 -1 2399178..2399603 + 141 119385133 - Pden_2405 - hypothetical protein 2377 59.49 -1 2399885..2400790 + 301 119385134 - Pden_2406 - D-alanine--D-alanine ligase 2378 64.77 0 2400950..2404012 - 1020 119385135 - Pden_2407 - Mur ligase middle domain-containing protein 2379 65.78 0 2404009..2405817 - 602 119385136 - Pden_2408 - hypothetical protein 2380 65.88 0 2405814..2406701 - 295 119385137 - Pden_2409 - hypothetical protein 2381 60.23 -1 2406704..2408428 - 574 119385138 - Pden_2410 - hypothetical protein 2382 66.67 0 2408431..2409807 - 458 119385139 - Pden_2411 - outer membrane efflux protein 2383 63.42 0 2409815..2411014 - 399 119385140 - Pden_2412 - HlyD family type I secretion membrane fusion protein 2384 65.01 0 2411014..2413311 - 765 119385141 - Pden_2413 - ABC transporter related 2385 52.13 -2 2419791..2420072 + 93 119385142 - Pden_2414 - hypothetical protein 2386 51.38 -2 2420089..2420415 - 108 119385143 - Pden_2415 - XRE family transcriptional regulator 2387 60.00 -1 2421784..2421978 - 64 119385144 - Pden_2416 - hypothetical protein 2388 65.36 0 2422041..2422346 - 101 119385145 - Pden_2417 - IS66 Orf2 family protein 2389 63.35 0 2422453..2423145 + 230 119385146 - Pden_2418 - phage integrase family protein 2390 59.31 -1 2423384..2424307 - 307 119385147 - Pden_2419 - phage integrase family protein 2391 61.59 -1 2424334..2424609 - 91 119385148 - Pden_2420 - hypothetical protein 2392 52.85 -2 2424703..2425491 + 262 119385149 - Pden_2421 - XRE family transcriptional regulator 2393 67.94 0 2426535..2427872 - 445 119385150 - Pden_2423 - hypothetical protein 2394 69.30 0 2428012..2428923 + 303 119385151 - Pden_2424 - transporter DMT superfamily protein 2395 69.50 0 2428920..2429660 + 246 119385152 - Pden_2425 - hypothetical protein 2396 71.35 +1 2429742..2431064 + 440 119385153 - Pden_2426 - Pyrrolo-quinoline quinone 2397 67.96 0 2431061..2432530 + 489 119385154 engA Pden_2427 - GTP-binding protein EngA 2398 72.13 +1 2432540..2433400 - 286 119385155 - Pden_2428 - hypothetical protein 2399 68.99 0 2433457..2434749 - 430 119385156 - Pden_2429 - seryl-tRNA synthetase 2400 72.50 +1 2434831..2435190 - 119 119385157 - Pden_2430 - SoxS 2401 71.10 +1 2435333..2436346 + 337 119385158 - Pden_2431 - arginine/ornithine transport system ATPase 2402 72.25 +1 2436330..2436920 + 196 119385159 - Pden_2432 - methylated-DNA--protein-cysteine methyltransferase 2403 65.22 0 2437076..2437351 + 91 119385160 rpmB Pden_2433 - 50S ribosomal protein L28 2404 69.54 0 2437625..2438041 + 138 119385161 - Pden_2434 - hypothetical protein 2405 70.34 0 2438041..2438394 + 117 119385162 - Pden_2435 - hypothetical protein 2406 62.42 0 2438382..2439323 - 313 119385163 - Pden_2436 - hypothetical protein 2407 61.30 -1 2439316..2440302 - 328 119385164 - Pden_2437 - hypothetical protein 2408 74.93 +1 2440299..2441363 - 354 119385165 - Pden_2438 - 3-oxoacyl-(acyl carrier protein) synthase 2409 71.12 +1 2441360..2442460 - 366 119385166 - Pden_2439 - hypothetical protein 2410 70.41 0 2442469..2445216 - 915 119385167 - Pden_2440 - ATPase 2411 73.69 +1 2445389..2447494 + 701 119385168 - Pden_2441 - protein kinase 2412 71.00 +1 2447625..2448755 + 376 119385169 - Pden_2442 - ImpA domain-containing protein 2413 65.75 0 2448813..2449355 + 180 119385170 - Pden_2443 - hypothetical protein 2414 65.21 0 2449359..2450873 + 504 119385171 - Pden_2444 - hypothetical protein 2415 61.96 -1 2451018..2451506 + 162 119385172 - Pden_2445 - hypothetical protein 2416 74.97 +1 2451532..2452278 + 248 119385173 - Pden_2446 - hypothetical protein 2417 75.04 +2 2452278..2454140 + 620 119385174 - Pden_2447 - hypothetical protein 2418 74.66 +1 2454104..2455141 + 345 119385175 - Pden_2448 - hypothetical protein 2419 73.95 +1 2455141..2456376 + 411 119385176 - Pden_2449 - FHA domain-containing protein 2420 73.42 +1 2456373..2456846 + 157 119385177 - Pden_2450 - hypothetical protein 2421 72.81 +1 2456858..2458192 + 444 119385178 - Pden_2451 - hypothetical protein 2422 74.64 +1 2458202..2459593 + 463 119385179 - Pden_2452 - OmpA/MotB domain-containing protein 2423 71.14 +1 2459594..2463124 + 1176 119385180 - Pden_2453 - ImcF domain-containing protein 2424 76.94 +2 2463106..2463621 + 171 119385181 - Pden_2454 - hypothetical protein 2425 68.66 0 2463608..2465959 - 783 119385182 - Pden_2455 - Rhs element Vgr protein 2426 76.64 +2 2466042..2468447 - 801 119385183 - Pden_2456 - hypothetical protein 2427 71.62 +1 2468423..2469370 - 315 119385184 - Pden_2457 - hypothetical protein 2428 75.03 +2 2469372..2470148 - 258 119385185 - Pden_2458 - protein phosphatase 2C domain-containing protein 2429 64.81 0 2470233..2470826 + 197 119385186 - Pden_2459 - OmpA/MotB domain-containing protein 2430 70.07 0 2470943..2472706 + 587 119385187 - Pden_2460 - polypeptide-transport-associated domain-containing protein 2431 72.51 +1 2472753..2477666 + 1637 119385188 - Pden_2461 - filamentous haemagglutinin outer membrane protein 2432 72.51 +1 2477635..2479584 + 649 119385189 - Pden_2462 - peptidase C14, caspase catalytic subunit p20 2433 60.82 -1 2479845..2480135 - 96 119385190 - Pden_2463 - hypothetical protein 2434 65.97 0 2480226..2480945 - 239 119385191 - Pden_2464 - hypothetical protein 2435 63.17 0 2480963..2482648 - 561 119385192 - Pden_2465 - hemolysin-type calcium-binding region 2436 65.80 0 2482759..2483106 - 115 119385193 - Pden_2466 - hypothetical protein 2437 55.66 -2 2483174..2484091 - 305 119385194 - Pden_2467 - response regulator receiver protein 2438 69.03 0 2484647..2485534 + 295 119385195 - Pden_2468 - cation diffusion facilitator family transporter 2439 68.18 0 2485531..2486523 - 330 119385196 - Pden_2469 - ABC transporter related 2440 63.10 0 2486561..2487400 - 279 119385197 - Pden_2470 - binding-protein-dependent transport systems inner membrane component 2441 63.51 0 2487410..2488327 - 305 119385198 - Pden_2471 - binding-protein-dependent transport systems inner membrane component 2442 65.63 0 2488422..2489681 - 419 119385199 - Pden_2472 - extracellular solute-binding protein 2443 72.35 +1 2489730..2490608 - 292 119385200 murQ Pden_2473 - N-acetylmuramic acid-6-phosphate etherase 2444 73.50 +1 2490761..2491594 + 277 119385201 - Pden_2474 - ATPase, BadF/BadG/BcrA/BcrD type 2445 69.53 0 2491594..2492361 + 255 119385202 - Pden_2475 - UbiC transcription regulator-associated domain-containing protein 2446 71.44 +1 2492361..2493386 + 341 119385203 - Pden_2476 - glutamine--fructose-6-phosphate transaminase (isomerizing) 2447 72.64 +1 2493386..2494507 + 373 119385204 - Pden_2477 - N-acetylglucosamine-6-phosphate deacetylase 2448 65.73 0 2494525..2495274 + 249 119385205 - Pden_2478 - CRP/FNR family transcriptional regulator 2449 67.52 0 2495469..2495702 - 77 119385206 - Pden_2479 - hypothetical protein 2450 70.95 +1 2495706..2496242 - 178 119385207 - Pden_2480 - cytochrome c oxidase, subunit III 2451 71.31 +1 2496242..2498158 - 638 119385208 - Pden_2481 - von Willebrand factor, type A 2452 69.00 0 2498170..2498982 - 270 119385209 - Pden_2482 - ATPase 2453 62.42 0 2498986..2500374 - 462 119385210 - Pden_2483 - cytochrome c oxidase, subunit I 2454 61.15 -1 2500388..2500840 - 150 119385211 - Pden_2484 - nitric-oxide reductase 2455 73.55 +1 2500915..2501829 - 304 119385212 - Pden_2485 - ApbE family lipoprotein 2456 70.28 0 2501826..2503871 - 681 119385213 - Pden_2486 - FMN-binding domain-containing protein 2457 64.15 0 2503999..2505789 + 596 119385214 - Pden_2487 - hydroxylamine reductase 2458 72.22 +1 2505861..2506724 + 287 119385215 - Pden_2488 - uroporphyrin-III C-methyltransferase 2459 71.15 +1 2506717..2507028 + 103 119385216 - Pden_2489 - cytochrome c (c55X) 2460 69.00 0 2507025..2508179 + 384 119385217 - Pden_2490 - cytochrome d1, heme region 2461 72.63 +1 2508182..2509153 + 323 119385218 - Pden_2491 - AsnC family transcriptional regulator 2462 68.14 0 2509150..2509623 + 157 119385219 - Pden_2492 - AsnC family transcriptional regulator 2463 68.32 0 2509620..2510102 + 160 119385220 - Pden_2493 - AsnC family transcriptional regulator 2464 68.22 0 2510116..2511339 + 407 119385221 - Pden_2494 - radical SAM domain-containing protein 2465 65.64 0 2511314..2512768 + 484 119385222 - Pden_2495 - cytochrome d1, heme region 2466 70.41 0 2512725..2512991 + 88 119385223 - Pden_2496 - hypothetical protein 2467 66.48 0 2513247..2515424 + 725 119385224 - Pden_2497 - catalase/peroxidase HPI 2468 71.34 +1 2515560..2517761 - 733 119385225 - Pden_2498 - primosome assembly protein PriA 2469 63.30 0 2518051..2518704 + 217 119385226 - Pden_2499 - putative translaldolase 2470 70.04 0 2518704..2519414 + 236 119385227 - Pden_2500 - hypothetical protein 2471 72.20 +1 2519411..2520349 + 312 119385228 xerC Pden_2501 - site-specific tyrosine recombinase XerC 2472 69.70 0 2520515..2521273 + 252 119385229 - Pden_2502 - hypothetical protein 2473 70.01 0 2521311..2522297 - 328 119385230 - Pden_2503 - L-asparaginase II 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0