version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2253 57.92 -2 2276961..2277200 - 79 119385010 - Pden_2278 - hypothetical protein 2254 59.24 -1 2277297..2277767 - 156 119385011 - Pden_2279 - hypothetical protein 2255 63.81 0 2277814..2278233 + 139 119385012 - Pden_2280 - hypothetical protein 2256 62.43 0 2278522..2279088 + 188 119385013 - Pden_2281 - Arc domain-containing protein 2257 50.89 -2 2279485..2280549 - 354 119385014 - Pden_2282 - TPR repeat-containing protein 2258 60.40 -1 2280660..2281010 - 116 119385015 - Pden_2283 - hypothetical protein 2259 64.21 0 2281578..2282513 + 311 119385016 - Pden_2285 - substrate-binding region of ABC-type glycine betaine transport system 2260 66.80 0 2282514..2284010 + 498 119385017 - Pden_2286 - sulfatase 2261 68.73 0 2284145..2284726 + 193 119385018 - Pden_2287 - hypothetical protein 2262 68.51 0 2284766..2285524 + 252 119385019 - Pden_2288 - monofunctional biosynthetic peptidoglycan transglycosylase 2263 64.03 0 2285541..2286299 + 252 119385020 - Pden_2289 - glutathione S-transferase domain-containing protein 2264 67.82 0 2286280..2287323 + 347 119385021 - Pden_2290 - hypothetical protein 2265 67.20 0 2287320..2288261 + 313 119385022 - Pden_2291 - hypothetical protein 2266 65.95 0 2288274..2289668 - 464 119385023 - Pden_2292 - hypothetical protein 2267 68.08 0 2289665..2291365 - 566 119385024 - Pden_2293 - glycosyl transferase family protein 2268 65.30 0 2291362..2292387 - 341 119385025 - Pden_2294 - hypothetical protein 2269 74.01 +1 2292415..2293653 - 412 119385026 - Pden_2295 - glycosyl transferase, group 1 2270 67.87 0 2293643..2294641 - 332 119385027 - Pden_2296 - UDP-glucose 4-epimerase 2271 64.53 0 2294647..2295537 - 296 119385028 - Pden_2297 - nucleotidyl transferase 2272 73.12 +1 2295684..2296892 - 402 119385029 - Pden_2298 - glycosyl transferase family protein 2273 70.91 +1 2296892..2297692 - 266 119385030 - Pden_2299 - 3-deoxy-manno-octulosonate cytidylyltransferase 2274 67.17 0 2297697..2298494 - 265 119385031 - Pden_2300 - 3'(2'),5'-bisphosphate nucleotidase 2275 61.80 -1 2298636..2299457 + 273 119385032 - Pden_2301 - ABC-2 type transporter 2276 63.28 0 2299715..2301631 + 638 119385033 - Pden_2302 - chaperone protein DnaK 2277 67.19 0 2301713..2302867 + 384 119385034 - Pden_2303 - chaperone protein DnaJ 2278 67.30 0 2302913..2303704 + 263 119385035 radC Pden_2304 - DNA repair protein RadC 2279 68.03 0 2303887..2304474 + 195 119385036 - Pden_2305 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 2280 62.13 -1 2304485..2305807 + 440 119385037 - Pden_2306 - cytochrome b/b6 domain-containing protein 2281 69.11 0 2305820..2307172 + 450 119385038 - Pden_2307 - cytochrome c1 2282 70.80 +1 2307311..2308180 + 289 119385039 - Pden_2308 - ribokinase 2283 69.78 0 2308220..2309023 + 267 119385040 - Pden_2309 - peptidase S49 2284 68.47 0 2309020..2309130 + 36 119385041 - Pden_2310 - hypothetical protein 2285 68.61 0 2309127..2309897 + 256 119385042 - Pden_2311 - short chain dehydrogenase 2286 66.77 0 2310199..2312070 + 623 119385043 uvrC Pden_2312 - excinuclease ABC subunit C 2287 64.81 0 2312083..2312514 + 143 119385044 - Pden_2313 - hypothetical protein 2288 69.70 0 2312521..2313147 - 208 119385045 - Pden_2314 - hypothetical protein 2289 66.90 0 2313159..2314460 - 433 119385046 - Pden_2315 - hypothetical protein 2290 68.60 0 2314465..2315241 - 258 119385047 - Pden_2316 - ABC transporter related 2291 67.67 0 2315238..2316332 - 364 119385048 - Pden_2317 - hypothetical protein 2292 69.28 0 2316776..2317693 - 305 119385049 - Pden_2318 - LysR family transcriptional regulator 2293 67.71 0 2317784..2318647 + 287 119385050 - Pden_2319 - 5,10-methylenetetrahydrofolate reductase 2294 70.49 0 2318675..2319826 - 383 119385051 - Pden_2320 - hypothetical protein 2295 67.18 0 2319868..2321031 - 387 119385052 - Pden_2321 - Orn/DAP/Arg decarboxylase 2 2296 67.59 0 2321165..2321596 + 143 119385053 - Pden_2322 - AsnC family transcriptional regulator 2297 70.52 0 2321563..2322159 - 198 119385054 - Pden_2323 - putative methyltransferase 2298 71.51 +1 2322156..2323352 - 398 119385055 - Pden_2324 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2299 65.88 0 2323408..2323914 + 168 119385056 - Pden_2325 - redoxin domain-containing protein 2300 68.35 0 2323848..2324561 - 237 119385057 - Pden_2326 - HxlR family transcriptional regulator 2301 61.62 -1 2324650..2325006 + 118 119385058 - Pden_2327 - hypothetical protein 2302 67.99 0 2325203..2325805 + 200 119385059 - Pden_2328 - glyoxalase/bleomycin resistance protein/dioxygenase 2303 67.30 0 2325802..2326437 + 211 119385060 - Pden_2329 - YceI family protein 2304 67.93 0 2326441..2327073 + 210 119385061 - Pden_2330 - glutathione S-transferase domain-containing protein 2305 66.51 0 2327364..2330456 + 1030 119385062 valS Pden_2331 - valyl-tRNA synthetase 2306 73.02 +1 2330519..2331211 - 230 119385063 - Pden_2332 - cobalamin (vitamin B12) biosynthesis CbiX protein 2307 67.02 0 2331204..2331767 - 187 119385064 - Pden_2333 - hypothetical protein 2308 70.59 0 2331856..2332365 + 169 119385065 - Pden_2334 - NnrU family protein 2309 74.53 +1 2332349..2333365 - 338 119385066 - Pden_2335 - FAD dependent oxidoreductase 2310 71.23 +1 2333413..2334069 + 218 119385067 - Pden_2336 - hypothetical protein 2311 67.09 0 2334066..2334782 - 238 119385068 - Pden_2337 - rhomboid family protein 2312 67.85 0 2334887..2336155 + 422 119385069 - Pden_2338 - 4-aminobutyrate aminotransferase 2313 66.56 0 2336443..2337399 - 318 119385070 - Pden_2339 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2314 70.98 +1 2337468..2337908 - 146 119385071 - Pden_2340 - molybdopterin biosynthesis MoaE 2315 69.05 0 2337910..2338161 - 83 119385072 - Pden_2341 - molybdopterin converting factor, subunit 1 2316 65.08 0 2338151..2338780 - 209 119385073 - Pden_2342 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2317 70.52 0 2338840..2339280 - 146 119385074 - Pden_2343 - MerR family transcriptional regulator 2318 72.67 +1 2339369..2341567 + 732 119385075 - Pden_2344 - heavy metal translocating P-type ATPase 2319 68.08 0 2341915..2344743 - 942 119385076 - Pden_2346 - glycine dehydrogenase 2320 65.83 0 2344903..2345259 - 118 119385077 - Pden_2347 - glycine cleavage system H protein 2321 70.62 0 2345270..2346382 - 370 119385078 - Pden_2348 - glycine cleavage system T protein 2322 71.01 +1 2346659..2347441 - 260 119385079 - Pden_2349 - short-chain dehydrogenase/reductase SDR 2323 65.19 0 2347500..2347838 - 112 119385080 - Pden_2350 - hypothetical protein 2324 68.29 0 2347835..2348449 - 204 119385081 - Pden_2351 - hypothetical protein 2325 70.44 0 2348533..2349858 - 441 119385082 - Pden_2352 - histidine kinase 2326 71.83 +1 2349862..2351043 - 393 119385083 - Pden_2353 - hypothetical protein 2327 66.53 0 2351040..2351750 - 236 119385084 - Pden_2354 - two component LuxR family transcriptional regulator 2328 70.40 0 2351939..2352928 + 329 119385085 - Pden_2355 - putative ABC transporter periplasmic solute-binding protein 2329 69.09 0 2352936..2353718 + 260 119385086 - Pden_2356 - binding-protein-dependent transport systems inner membrane component 2330 71.57 +1 2353708..2354298 + 196 119385087 - Pden_2357 - ABC transporter related 2331 68.35 0 2354286..2355056 - 256 119385088 - Pden_2358 - hypothetical protein 2332 70.98 +1 2355053..2356189 - 378 119385089 - Pden_2359 - pyrroloquinoline quinone biosynthesis protein PqqE 2333 70.87 +1 2356186..2356494 - 102 119385090 - Pden_2360 - coenzyme PQQ synthesis D 2334 68.55 0 2356491..2357285 - 264 119385091 - Pden_2361 - pyrroloquinoline quinone biosynthesis protein PqqC 2335 70.26 0 2357282..2358172 - 296 119385092 - Pden_2362 - pyrroloquinoline quinone biosynthesis protein PqqB 2336 72.73 +1 2358471..2359526 + 351 119385093 - Pden_2363 - beta-lactamase domain-containing protein 2337 71.76 +1 2359584..2365085 + 1833 119385094 - Pden_2364 - alpha-2-macroglobulin domain-containing protein 2338 72.10 +1 2365153..2366238 + 361 119385095 - Pden_2365 - Fis family transcriptional regulator 2339 64.70 0 2366345..2367871 + 508 119385096 - Pden_2366 - aldehyde dehydrogenase 2340 66.76 0 2367955..2368989 + 344 119385097 - Pden_2367 - alcohol dehydrogenase 2341 68.07 0 2368992..2369348 + 118 119385098 - Pden_2368 - hypothetical protein 2342 67.71 0 2369402..2369593 - 63 119385099 - Pden_2369 - hypothetical protein 2343 68.39 0 2369590..2370228 - 212 119385100 - Pden_2370 - peptidase S16, lon domain-containing protein 2344 70.18 0 2370230..2371141 - 303 119385101 - Pden_2371 - thioredoxin domain-containing protein 2345 65.39 0 2371232..2372017 - 261 119385102 - Pden_2372 - exodeoxyribonuclease III Xth 2346 65.85 0 2372110..2372355 + 81 119385103 - Pden_2373 - hypothetical protein 2347 63.46 0 2372321..2373007 - 228 119385104 - Pden_2374 - two component transcriptional regulator 2348 70.06 0 2373141..2374202 + 353 119385105 - Pden_2375 - GTP cyclohydrolase II 2349 73.71 +1 2374211..2374735 + 174 119385106 - Pden_2376 - hypothetical protein 2350 68.40 0 2374740..2375489 - 249 119385107 - Pden_2377 - short-chain dehydrogenase/reductase SDR 2351 72.08 +1 2375591..2376790 - 399 119385108 - Pden_2378 - putative RNA methylase 2352 70.57 0 2376954..2377748 + 264 119385109 - Pden_2379 - glyoxalase/bleomycin resistance protein/dioxygenase 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0